RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 CFAP45Q9UL16 551 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 SPATA31A3Q5VYP0 1347 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 TTC41PQ6P2S7 1318 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 DIP2CQ9Y2E4 1556 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 A0A1B0GUL7 405 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 BRF1Q92994 677 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 DBNDD2Q9BQY9 259 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 QTRT2Q9H974 415 aaKnown RBP15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 GOLGA8AA7E2F4 631 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 C8orf76Q96K31 380 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 NAT10Q9H0A0 1025 aaKnown RBP15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 SLC4A4Q9Y6R1 1079 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 SPHKAPQ2M3C7 1700 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 NASPP49321 788 aaPredicted RBP15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 CCDC96Q2M329 555 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 CRNKL1Q9BZJ0 848 aaKnown RBP15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 USP44Q9H0E7 712 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 PDE8AO60658 829 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 AXIN2Q9Y2T1 843 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 CEP152O94986 1710 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 MIGA1Q8NAN2 632 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 NCOA7Q8NI08 942 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 NOC3LQ8WTT2 800 aaKnown RBP15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 STX8Q9UNK0 236 aa15.37■□□□□ 0.05
PTPRN2-202ENST00000389416 PROSER3Q2NL68 480 aa15.36■□□□□ 0.05
PTPRN2-202ENST00000389416 PRAMEF22A3QJZ6 481 aa15.36■□□□□ 0.05
PTPRN2-202ENST00000389416 KRT18P05783 430 aaKnown RBP15.36■□□□□ 0.05
PTPRN2-202ENST00000389416 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
PTPRN2-202ENST00000389416 TCIRG1Q13488 830 aa15.36■□□□□ 0.05
PTPRN2-202ENST00000389416 C8orf34Q49A92 452 aa15.36■□□□□ 0.05
PTPRN2-202ENST00000389416 TNMDQ9H2S6 317 aa15.36■□□□□ 0.05
PTPRN2-202ENST00000389416 HMG20BQ9P0W2 317 aa15.36■□□□□ 0.05
PTPRN2-202ENST00000389416 CROCC2H7BZ55 1655 aa15.36■□□□□ 0.05
PTPRN2-202ENST00000389416 PDE4BQ07343 736 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 IPO7O95373 1038 aaKnown RBP15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 CEP89Q96ST8 783 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 ZHX3Q9H4I2 956 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 STK32BQ9NY57 414 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 ADGRL3Q9HAR2 1447 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 LOC102724428A0A0B4J2F2 783 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 KCNQ4P56696 695 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 SIK1P57059 783 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 CATIPQ7Z7H3 387 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 SEC63Q9UGP8 760 aaKnown RBP15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 TAF5LO75529 589 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 SSFA2P28290 1259 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 ZNF804AQ7Z570 1209 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 NECAB1Q8N987 351 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 E9PCH4 1651 aa15.35■□□□□ 0.05
PTPRN2-202ENST00000389416 SSBP05455 408 aaKnown RBP eCLIP15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 TRIM5Q9C035 493 aa15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 RTL1A6NKG5 1358 aa15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 MRE11P49959 708 aa15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 VAT1LQ9HCJ6 419 aa15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 TRPC5Q9UL62 973 aaPredicted RBP15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 HMGN5P82970 282 aaKnown RBP15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 MAGEB6Q8N7X4 407 aa15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 FAM13BQ9NYF5 915 aa15.34■□□□□ 0.05
PTPRN2-202ENST00000389416 ANKARQ7Z5J8 1434 aa15.33■□□□□ 0.05
PTPRN2-202ENST00000389416 MCM5P33992 734 aa15.33■□□□□ 0.05
PTPRN2-202ENST00000389416 ZGPATQ8N5A5 531 aaKnown RBP15.33■□□□□ 0.05
PTPRN2-202ENST00000389416 ARID3AQ99856 593 aa15.33■□□□□ 0.05
PTPRN2-202ENST00000389416 NDUFB9Q9Y6M9 179 aa15.33■□□□□ 0.05
PTPRN2-202ENST00000389416 ADGRB3O60242 1522 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 GLI2P10070 1586 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 SEC24BO95487 1268 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 CHMLP26374 656 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 TSPY26PQ9H489 355 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 RNF113AO15541 343 aaKnown RBP15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 POLD1P28340 1107 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 ZNF76P36508 570 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 GSTO1P78417 241 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 PICALMQ13492 652 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 OGFOD1Q8N543 542 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 ZNF592Q92610 1267 aa15.33■□□□□ 0.04
PTPRN2-202ENST00000389416 LETM1O95202 739 aaPredicted RBP15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 HLA-DOAP06340 250 aa15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 TTLL12Q14166 644 aaPredicted RBP15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 ANKRD2Q9GZV1 360 aa15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 ORC3Q9UBD5 711 aaPredicted RBP15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 IARSP41252 1262 aaKnown RBP15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 GDPD2Q9HCC8 539 aa15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 TFIP11Q9UBB9 837 aaKnown RBP15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 SETD1BQ9UPS6 1966 aaKnown RBP15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 KLF18A0A0U1RQI7 1052 aa15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 GJB2P29033 226 aa15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 TMX3Q96JJ7 454 aa15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 PDIA4P13667 645 aaKnown RBP15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 FEZ1Q99689 392 aa15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 ZBTB1Q9Y2K1 713 aa15.32■□□□□ 0.04
PTPRN2-202ENST00000389416 CHST3Q7LGC8 479 aa15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 CCAR2Q8N163 923 aaKnown RBP15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 ABCC4O15439 1325 aa15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 METAP2P50579 478 aaKnown RBP eCLIP15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 XAGE2Q96GT9 111 aa15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 LMTK2Q8IWU2 1503 aa15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 BRPF1P55201 1214 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms