RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PARP10Q53GL7 1025 aa11.85□□□□□ -0.51
HMGN1-202ENST00000380747 NUTM1Q86Y26 1132 aa11.85□□□□□ -0.51
HMGN1-202ENST00000380747 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
HMGN1-202ENST00000380747 UBN2Q6ZU65 1347 aa11.85□□□□□ -0.51
HMGN1-202ENST00000380747 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
HMGN1-202ENST00000380747 HSPA1AP0DMV8 641 aaKnown RBP11.84□□□□□ -0.51
HMGN1-202ENST00000380747 HSPA1BP0DMV9 641 aaKnown RBP11.84□□□□□ -0.51
HMGN1-202ENST00000380747 TCIRG1Q13488 830 aa11.84□□□□□ -0.51
HMGN1-202ENST00000380747 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
HMGN1-202ENST00000380747 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
HMGN1-202ENST00000380747 ZNF622Q969S3 477 aaKnown RBP eCLIP11.84□□□□□ -0.51
HMGN1-202ENST00000380747 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 NTSR2O95665 410 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 HNRNPUQ00839 825 aaKnown RBP eCLIP11.83□□□□□ -0.52
HMGN1-202ENST00000380747 RASSF7Q02833 373 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 SLFN5Q08AF3 891 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 ERFEQ4G0M1 354 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 NLRP10Q86W26 655 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 TTLL6Q8N841 843 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 ZNF428Q96B54 188 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 UTP14AQ9BVJ6 771 aaKnown RBP11.83□□□□□ -0.52
HMGN1-202ENST00000380747 PDZRN3Q9UPQ7 1066 aa11.83□□□□□ -0.52
HMGN1-202ENST00000380747 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
HMGN1-202ENST00000380747 NUP98P52948 1817 aa11.82□□□□□ -0.52
HMGN1-202ENST00000380747 G2E3Q7L622 706 aa11.82□□□□□ -0.52
HMGN1-202ENST00000380747 DLEC1Q9Y238 1755 aa11.82□□□□□ -0.52
HMGN1-202ENST00000380747 IBTKQ9P2D0 1353 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-202ENST00000380747 POTECB2RU33 542 aa11.81□□□□□ -0.52
HMGN1-202ENST00000380747 NFKBIEO00221 500 aa11.81□□□□□ -0.52
HMGN1-202ENST00000380747 MYD88Q99836 296 aa11.81□□□□□ -0.52
HMGN1-202ENST00000380747 ISCA1Q9BUE6 129 aa11.81□□□□□ -0.52
HMGN1-202ENST00000380747 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
HMGN1-202ENST00000380747 MAP3K2Q9Y2U5 619 aa11.81□□□□□ -0.52
HMGN1-202ENST00000380747 SRGNP10124 158 aa11.8□□□□□ -0.52
HMGN1-202ENST00000380747 FLIIQ13045 1269 aa11.8□□□□□ -0.52
HMGN1-202ENST00000380747 FKBP5Q13451 457 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-202ENST00000380747 STYK1Q6J9G0 422 aa11.8□□□□□ -0.52
HMGN1-202ENST00000380747 DPY19L2Q6NUT2 758 aa11.8□□□□□ -0.52
HMGN1-202ENST00000380747 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
HMGN1-202ENST00000380747 MASTLQ96GX5 879 aa11.8□□□□□ -0.52
HMGN1-202ENST00000380747 ANKRD31Q8N7Z5 1873 aa11.8□□□□□ -0.52
HMGN1-202ENST00000380747 PI4KAP2A4QPH2 592 aa11.79□□□□□ -0.52
HMGN1-202ENST00000380747 NPR1P16066 1061 aa11.79□□□□□ -0.52
HMGN1-202ENST00000380747 PI4KAP1Q8N8J0 262 aa11.79□□□□□ -0.52
HMGN1-202ENST00000380747 CNKSR1Q969H4 720 aa11.79□□□□□ -0.52
HMGN1-202ENST00000380747 METTL22Q9BUU2 404 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-202ENST00000380747 TIAM2Q8IVF5 1701 aa11.79□□□□□ -0.52
HMGN1-202ENST00000380747 RNF123Q5XPI4 1314 aa11.79□□□□□ -0.52
HMGN1-202ENST00000380747 SH3TC1Q8TE82 1336 aa11.79□□□□□ -0.52
HMGN1-202ENST00000380747 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
HMGN1-202ENST00000380747 COL11A2P13942 1736 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-202ENST00000380747 ANKRD36CQ5JPF3 1778 aa11.78□□□□□ -0.52
HMGN1-202ENST00000380747 KLRG2A4D1S0 409 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-202ENST00000380747 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-202ENST00000380747 NEXNQ0ZGT2 675 aa11.78□□□□□ -0.52
HMGN1-202ENST00000380747 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-202ENST00000380747 TRMT2AQ8IZ69 625 aaKnown RBP11.78□□□□□ -0.52
HMGN1-202ENST00000380747 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
HMGN1-202ENST00000380747 RPGRQ92834 1020 aaKnown RBP11.78□□□□□ -0.52
HMGN1-202ENST00000380747 FAM89AQ96GI7 184 aa11.78□□□□□ -0.52
HMGN1-202ENST00000380747 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
HMGN1-202ENST00000380747 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
HMGN1-202ENST00000380747 ARFGEF2Q9Y6D5 1785 aa11.77□□□□□ -0.52
HMGN1-202ENST00000380747 C21orf2O43822 256 aa11.77□□□□□ -0.53
HMGN1-202ENST00000380747 TRIM28Q13263 835 aaKnown RBP11.77□□□□□ -0.53
HMGN1-202ENST00000380747 SLC10A5Q5PT55 438 aa11.77□□□□□ -0.53
HMGN1-202ENST00000380747 PRPF40BQ6NWY9 871 aaKnown RBP11.77□□□□□ -0.53
HMGN1-202ENST00000380747 C3orf67Q6ZVT6 689 aa11.77□□□□□ -0.53
HMGN1-202ENST00000380747 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
HMGN1-202ENST00000380747 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
HMGN1-202ENST00000380747 CWC25Q9NXE8 425 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-202ENST00000380747 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.53
HMGN1-202ENST00000380747 IGKV5-2P06315 115 aa11.76□□□□□ -0.53
HMGN1-202ENST00000380747 ALDH1B1P30837 517 aa11.76□□□□□ -0.53
HMGN1-202ENST00000380747 CRY2Q49AN0 593 aa11.76□□□□□ -0.53
HMGN1-202ENST00000380747 CCDC191Q8NCU4 936 aa11.76□□□□□ -0.53
HMGN1-202ENST00000380747 DNAAF4Q8WXU2 420 aa11.76□□□□□ -0.53
HMGN1-202ENST00000380747 JARID2Q92833 1246 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-202ENST00000380747 RBM17Q96I25 401 aaKnown RBP11.76□□□□□ -0.53
HMGN1-202ENST00000380747 BCL2L13Q9BXK5 485 aa11.76□□□□□ -0.53
HMGN1-202ENST00000380747 PRDM10Q9NQV6 1147 aa11.76□□□□□ -0.53
HMGN1-202ENST00000380747 F6X3S4 739 aa11.75□□□□□ -0.53
HMGN1-202ENST00000380747 IRS4O14654 1257 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-202ENST00000380747 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
HMGN1-202ENST00000380747 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
HMGN1-202ENST00000380747 ZBTB38Q8NAP3 1195 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-202ENST00000380747 SSH1Q8WYL5 1049 aa11.75□□□□□ -0.53
HMGN1-202ENST00000380747 SMC4Q9NTJ3 1288 aa11.75□□□□□ -0.53
HMGN1-202ENST00000380747 CNTNAP1P78357 1384 aa11.75□□□□□ -0.53
HMGN1-202ENST00000380747 DICER1Q9UPY3 1922 aaKnown RBP11.74□□□□□ -0.53
HMGN1-202ENST00000380747 NEURL1BA8MQ27 555 aa11.74□□□□□ -0.53
HMGN1-202ENST00000380747 PCCAP05165 728 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-202ENST00000380747 HOXA10P31260 410 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-202ENST00000380747 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
HMGN1-202ENST00000380747 PASKQ96RG2 1323 aa11.74□□□□□ -0.53
HMGN1-202ENST00000380747 FER1L6Q2WGJ9 1857 aa11.74□□□□□ -0.53
HMGN1-202ENST00000380747 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
HMGN1-202ENST00000380747 SOGA3Q5TF21 947 aa11.73□□□□□ -0.53
HMGN1-202ENST00000380747 SLC4A10Q6U841 1118 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms