RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 IL6STP40189 918 aaPredicted RBP12.79□□□□□ -0.36
C9orf85-202ENST00000377027 DCTN1Q14203 1278 aa12.79□□□□□ -0.36
C9orf85-202ENST00000377027 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
C9orf85-202ENST00000377027 MCM10Q7L590 875 aa12.79□□□□□ -0.36
C9orf85-202ENST00000377027 CDHR5Q9HBB8 845 aa12.79□□□□□ -0.36
C9orf85-202ENST00000377027 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
C9orf85-202ENST00000377027 STARD3NLO95772 234 aa12.78□□□□□ -0.36
C9orf85-202ENST00000377027 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
C9orf85-202ENST00000377027 FMNL2Q96PY5 1086 aa12.78□□□□□ -0.36
C9orf85-202ENST00000377027 BTBD11A6QL63 1104 aa12.77□□□□□ -0.37
C9orf85-202ENST00000377027 TULP1O00294 542 aaPredicted RBP12.77□□□□□ -0.37
C9orf85-202ENST00000377027 C2CD5Q86YS7 1000 aa12.77□□□□□ -0.37
C9orf85-202ENST00000377027 DNAJC5GQ8N7S2 189 aa12.77□□□□□ -0.37
C9orf85-202ENST00000377027 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
C9orf85-202ENST00000377027 NPDC1Q9NQX5 325 aaPredicted RBP12.77□□□□□ -0.37
C9orf85-202ENST00000377027 NUP98P52948 1817 aa12.76□□□□□ -0.37
C9orf85-202ENST00000377027 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
C9orf85-202ENST00000377027 U2AF1L5P0DN76 240 aaPredicted RBP12.76□□□□□ -0.37
C9orf85-202ENST00000377027 HTRA3P83110 453 aa12.76□□□□□ -0.37
C9orf85-202ENST00000377027 U2AF1Q01081 240 aaKnown RBP eCLIP12.76□□□□□ -0.37
C9orf85-202ENST00000377027 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
C9orf85-202ENST00000377027 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
C9orf85-202ENST00000377027 SLC4A5Q9BY07 1137 aa12.76□□□□□ -0.37
C9orf85-202ENST00000377027 ZNF330Q9Y3S2 320 aaPredicted RBP12.76□□□□□ -0.37
C9orf85-202ENST00000377027 A0A087WZG4 1122 aa12.75□□□□□ -0.37
C9orf85-202ENST00000377027 TK2O00142 265 aa12.75□□□□□ -0.37
C9orf85-202ENST00000377027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
C9orf85-202ENST00000377027 TTLL6Q8N841 843 aa12.75□□□□□ -0.37
C9orf85-202ENST00000377027 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
C9orf85-202ENST00000377027 CFAP53Q96M91 514 aa12.75□□□□□ -0.37
C9orf85-202ENST00000377027 TEX13AQ9BXU3 409 aaPredicted RBP12.75□□□□□ -0.37
C9orf85-202ENST00000377027 RRAGCQ9HB90 399 aa12.74□□□□□ -0.37
C9orf85-202ENST00000377027 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
C9orf85-202ENST00000377027 POTECB2RU33 542 aa12.73□□□□□ -0.37
C9orf85-202ENST00000377027 H0YIN7 160 aa12.73□□□□□ -0.37
C9orf85-202ENST00000377027 LMNB1P20700 586 aa12.73□□□□□ -0.37
C9orf85-202ENST00000377027 ADGRD1Q6QNK2 874 aa12.73□□□□□ -0.37
C9orf85-202ENST00000377027 DZIP3Q86Y13 1208 aaKnown RBP12.73□□□□□ -0.37
C9orf85-202ENST00000377027 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
C9orf85-202ENST00000377027 BRIP1Q9BX63 1249 aa12.73□□□□□ -0.37
C9orf85-202ENST00000377027 MIS18AQ9NYP9 233 aa12.73□□□□□ -0.37
C9orf85-202ENST00000377027 ZC3H4Q9UPT8 1303 aaKnown RBP12.72□□□□□ -0.37
C9orf85-202ENST00000377027 C21orf2O43822 256 aa12.72□□□□□ -0.37
C9orf85-202ENST00000377027 APLP1P51693 650 aa12.72□□□□□ -0.37
C9orf85-202ENST00000377027 PTGDRQ13258 359 aa12.72□□□□□ -0.37
C9orf85-202ENST00000377027 NUDCQ9Y266 331 aa12.72□□□□□ -0.37
C9orf85-202ENST00000377027 SNED1Q8TER0 1413 aa12.71□□□□□ -0.37
C9orf85-202ENST00000377027 KDM2BQ8NHM5 1336 aa12.71□□□□□ -0.37
C9orf85-202ENST00000377027 SNRPA1P09661 255 aaKnown RBP12.71□□□□□ -0.37
C9orf85-202ENST00000377027 SRGNP10124 158 aa12.71□□□□□ -0.37
C9orf85-202ENST00000377027 PROX2Q3B8N5 592 aa12.71□□□□□ -0.37
C9orf85-202ENST00000377027 THUMPD2Q9BTF0 503 aaKnown RBP12.71□□□□□ -0.37
C9orf85-202ENST00000377027 GLTPD2A6NH11 291 aa12.7□□□□□ -0.38
C9orf85-202ENST00000377027 HTATSF1O43719 755 aaKnown RBP12.7□□□□□ -0.38
C9orf85-202ENST00000377027 HLFQ16534 295 aa12.7□□□□□ -0.38
C9orf85-202ENST00000377027 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
C9orf85-202ENST00000377027 CNBD1Q8NA66 436 aa12.7□□□□□ -0.38
C9orf85-202ENST00000377027 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.38
C9orf85-202ENST00000377027 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
C9orf85-202ENST00000377027 KLRG2A4D1S0 409 aaPredicted RBP12.69□□□□□ -0.38
C9orf85-202ENST00000377027 PDE6BP35913 854 aa12.69□□□□□ -0.38
C9orf85-202ENST00000377027 PRSS12P56730 875 aa12.69□□□□□ -0.38
C9orf85-202ENST00000377027 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
C9orf85-202ENST00000377027 OLFM4Q6UX06 510 aa12.69□□□□□ -0.38
C9orf85-202ENST00000377027 SLC51AQ86UW1 340 aa12.69□□□□□ -0.38
C9orf85-202ENST00000377027 C7orf43Q8WVR3 580 aa12.69□□□□□ -0.38
C9orf85-202ENST00000377027 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
C9orf85-202ENST00000377027 SETDB2Q96T68 719 aa12.69□□□□□ -0.38
C9orf85-202ENST00000377027 COL4A5P29400 1685 aa12.69□□□□□ -0.38
C9orf85-202ENST00000377027 LTBP3Q9NS15 1303 aa12.68□□□□□ -0.38
C9orf85-202ENST00000377027 HRO43593 1189 aa12.68□□□□□ -0.38
C9orf85-202ENST00000377027 FSTL1Q12841 308 aa12.68□□□□□ -0.38
C9orf85-202ENST00000377027 TAF7Q15545 349 aaPredicted RBP12.68□□□□□ -0.38
C9orf85-202ENST00000377027 STYK1Q6J9G0 422 aa12.68□□□□□ -0.38
C9orf85-202ENST00000377027 CLEC4GQ6UXB4 293 aa12.68□□□□□ -0.38
C9orf85-202ENST00000377027 RTF1Q92541 710 aaKnown RBP12.68□□□□□ -0.38
C9orf85-202ENST00000377027 LAMB2P55268 1798 aa12.68□□□□□ -0.38
C9orf85-202ENST00000377027 ANKRD36CQ5JPF3 1778 aa12.68□□□□□ -0.38
C9orf85-202ENST00000377027 ADAMTSL1Q8N6G6 1762 aa12.68□□□□□ -0.38
C9orf85-202ENST00000377027 TRIM6-TRIM34B2RNG4 842 aa12.67□□□□□ -0.38
C9orf85-202ENST00000377027 GPR37O15354 613 aa12.67□□□□□ -0.38
C9orf85-202ENST00000377027 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
C9orf85-202ENST00000377027 GPIHBP1Q8IV16 184 aa12.67□□□□□ -0.38
C9orf85-202ENST00000377027 PDZRN3Q9UPQ7 1066 aa12.67□□□□□ -0.38
C9orf85-202ENST00000377027 ST5P78524 1137 aa12.66□□□□□ -0.38
C9orf85-202ENST00000377027 NFE2L2Q16236 605 aa12.66□□□□□ -0.38
C9orf85-202ENST00000377027 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
C9orf85-202ENST00000377027 LRP10Q7Z4F1 713 aa12.66□□□□□ -0.38
C9orf85-202ENST00000377027 NBPF5PQ86XG9 351 aaPredicted RBP12.66□□□□□ -0.38
C9orf85-202ENST00000377027 SPNS2Q8IVW8 549 aa12.66□□□□□ -0.38
C9orf85-202ENST00000377027 KLRG1Q96E93 195 aa12.66□□□□□ -0.38
C9orf85-202ENST00000377027 MASTLQ96GX5 879 aa12.66□□□□□ -0.38
C9orf85-202ENST00000377027 TSKSQ9UJT2 592 aa12.66□□□□□ -0.38
C9orf85-202ENST00000377027 SCN4AP35499 1836 aa12.66□□□□□ -0.38
C9orf85-202ENST00000377027 LTBP1Q14766 1721 aa12.65□□□□□ -0.38
C9orf85-202ENST00000377027 UBN2Q6ZU65 1347 aa12.65□□□□□ -0.38
C9orf85-202ENST00000377027 BHMG1C9JSJ3 638 aaPredicted RBP12.65□□□□□ -0.38
C9orf85-202ENST00000377027 VEGFAP15692 232 aaPredicted RBP12.65□□□□□ -0.38
C9orf85-202ENST00000377027 C16orf71Q8IYS4 520 aaPredicted RBP12.65□□□□□ -0.38
C9orf85-202ENST00000377027 JMYQ8N9B5 988 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms