RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 NECTIN1Q15223 517 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 LARP1Q6PKG0 1096 aaKnown RBP6.44□□□□□ -1.38
SRRM1-202ENST00000374389 IFNL2Q8IZJ0 200 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 RBM8AQ9Y5S9 174 aaKnown RBP6.44□□□□□ -1.38
SRRM1-202ENST00000374389 NDUFB9Q9Y6M9 179 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 STRCP1A6NGW2 1772 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 ATP5J2-PTCD1G3V325 749 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 PTCD1O75127 700 aaKnown RBP6.44□□□□□ -1.38
SRRM1-202ENST00000374389 ATF3P18847 181 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 SYT1P21579 422 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 ZNF589Q86UQ0 364 aaPredicted RBP6.44□□□□□ -1.38
SRRM1-202ENST00000374389 USP48Q86UV5 1035 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 ZSWIM6Q9HCJ5 1215 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 CREBZFQ9NS37 354 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.44□□□□□ -1.383e-7■■■□□ 15.6
SRRM1-202ENST00000374389 LIMCH1Q9UPQ0 1083 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 TNS3Q68CZ2 1445 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 SCN11AQ9UI33 1791 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 COL15A1P39059 1388 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 MED23Q9ULK4 1368 aa6.44□□□□□ -1.38
SRRM1-202ENST00000374389 WDR33Q9C0J8 1336 aaKnown RBP6.43□□□□□ -1.38
SRRM1-202ENST00000374389 CREB3L3Q68CJ9 461 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 LRSAM1Q6UWE0 723 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 ANKRD13DQ6ZTN6 518 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 CCDC83Q8IWF9 413 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 ZNF592Q92610 1267 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 GPATCH3Q96I76 525 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 TCEANC2Q96MN5 208 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 DBNLQ9UJU6 430 aaKnown RBP6.43□□□□□ -1.38
SRRM1-202ENST00000374389 CNPY2Q9Y2B0 182 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 NBPF26B4DH59 902 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 SNRPA1P09661 255 aaKnown RBP6.43□□□□□ -1.38
SRRM1-202ENST00000374389 PTPN12Q05209 780 aaKnown RBP6.43□□□□□ -1.38
SRRM1-202ENST00000374389 ME3Q16798 604 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 NBPF14Q5TI25 921 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 NBPF10Q6P3W6 841 aaKnown RBP6.43□□□□□ -1.38
SRRM1-202ENST00000374389 UBE3BQ7Z3V4 1068 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 NBPF15Q8N660 670 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 NECAB1Q8N987 351 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 MAP4K1Q92918 833 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 TRIM44Q96DX7 344 aaPredicted RBP6.43□□□□□ -1.38
SRRM1-202ENST00000374389 DCAF5Q96JK2 942 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 PDLIM2Q96JY6 352 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 SNRKQ9NRH2 765 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 PDRG1Q9NUG6 133 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 NAP1L2Q9ULW6 460 aaPredicted RBP6.43□□□□□ -1.38
SRRM1-202ENST00000374389 SPATA31A3Q5VYP0 1347 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 SLC27A2O14975 620 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 STX6O43752 255 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 MBD3O95983 291 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 ZSCAN22P10073 491 aaPredicted RBP6.43□□□□□ -1.38
SRRM1-202ENST00000374389 CASP7P55210 303 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 NEXNQ0ZGT2 675 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 RNF214Q8ND24 703 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 RUFY2Q8WXA3 655 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 COPRSQ9NQ92 184 aa6.43□□□□□ -1.38
SRRM1-202ENST00000374389 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.43□□□□□ -1.38
SRRM1-202ENST00000374389 TFCP2Q12800 502 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 RABL6Q3YEC7 729 aaPredicted RBP6.42□□□□□ -1.38
SRRM1-202ENST00000374389 VPS53Q5VIR6 699 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 TTC5Q8N0Z6 440 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 FSD1Q9BTV5 496 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 TM6SF1Q9BZW5 370 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 TPCN1Q9ULQ1 816 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 HDAC5Q9UQL6 1122 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 LTBP4Q8N2S1 1624 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 F13A1P00488 732 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 GJB2P29033 226 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 CNPY4Q8N129 248 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 TMEM87AQ8NBN3 555 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 FMNL2Q96PY5 1086 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 DBNDD2Q9BQY9 259 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 SMC3Q9UQE7 1217 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 MTMR6Q9Y217 621 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 DCCP43146 1447 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 JCADQ9P266 1359 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 ABCC6O95255 1503 aa6.42□□□□□ -1.38
SRRM1-202ENST00000374389 HSPA2P54652 639 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 CABP4P57796 275 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 TNNI3KQ59H18 835 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 TTLL7Q6ZT98 887 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 DCBLD2Q96PD2 775 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.41□□□□□ -1.38
SRRM1-202ENST00000374389 CYP46A1Q9Y6A2 500 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 FPGT-TNNI3KV9GXZ4 949 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 CPDO75976 1380 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 A0A087WZG4 1122 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 SLFNL1Q499Z3 407 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 SEC62Q99442 399 aaKnown RBP6.41□□□□□ -1.38
SRRM1-202ENST00000374389 PCDH10Q9P2E7 1040 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 PKD1L3Q7Z443 1732 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 ZNF609O15014 1411 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 FIBPO43427 364 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 TAF5LO75529 589 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 KCNJ4P48050 445 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 TOB2Q14106 344 aaPredicted RBP6.41□□□□□ -1.38
SRRM1-202ENST00000374389 CCDC129Q6ZRS4 1044 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 BRINP3Q76B58 766 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 CADPS2Q86UW7 1296 aa6.41□□□□□ -1.38
SRRM1-202ENST00000374389 ZSCAN30Q86W11 494 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms