RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 INTS4Q96HW7 963 aaKnown RBP21.53■■□□□ 1.04
CTSA-204ENST00000372484 PLA2G12BQ9BX93 195 aa21.53■■□□□ 1.04
CTSA-204ENST00000372484 GOLGA6L22H0YM25 854 aa21.53■■□□□ 1.04
CTSA-204ENST00000372484 CASTP20810 708 aaKnown RBP21.53■■□□□ 1.04
CTSA-204ENST00000372484 PTMSP20962 102 aa21.53■■□□□ 1.04
CTSA-204ENST00000372484 NLRP10Q86W26 655 aa21.53■■□□□ 1.04
CTSA-204ENST00000372484 MAP4K1Q92918 833 aa21.53■■□□□ 1.04
CTSA-204ENST00000372484 ACSBG1Q96GR2 724 aa21.53■■□□□ 1.04
CTSA-204ENST00000372484 RBM8AQ9Y5S9 174 aaKnown RBP21.53■■□□□ 1.04
CTSA-204ENST00000372484 ANKRD36CQ5JPF3 1778 aa21.53■■□□□ 1.04
CTSA-204ENST00000372484 BAG4O95429 457 aaKnown RBP21.52■■□□□ 1.04
CTSA-204ENST00000372484 ZKSCAN1P17029 563 aaPredicted RBP21.52■■□□□ 1.04
CTSA-204ENST00000372484 IL6STP40189 918 aaPredicted RBP21.52■■□□□ 1.04
CTSA-204ENST00000372484 MARCH10Q8NA82 808 aaPredicted RBP21.52■■□□□ 1.04
CTSA-204ENST00000372484 TTC14Q96N46 770 aa21.52■■□□□ 1.04
CTSA-204ENST00000372484 PUS3Q9BZE2 481 aaKnown RBP21.52■■□□□ 1.04
CTSA-204ENST00000372484 GZF1Q9H116 711 aaPredicted RBP21.52■■□□□ 1.04
CTSA-204ENST00000372484 NUP98P52948 1817 aa21.52■■□□□ 1.04
CTSA-204ENST00000372484 MED23Q9ULK4 1368 aa21.52■■□□□ 1.04
CTSA-204ENST00000372484 KCNB2Q92953 911 aa21.52■■□□□ 1.03
CTSA-204ENST00000372484 CCDC85AQ96PX6 553 aaPredicted RBP21.52■■□□□ 1.03
CTSA-204ENST00000372484 DZIP3Q86Y13 1208 aaKnown RBP21.51■■□□□ 1.03
CTSA-204ENST00000372484 ZNF609O15014 1411 aa21.51■■□□□ 1.03
CTSA-204ENST00000372484 JAKMIP1Q96N16 626 aaKnown RBP21.5■■□□□ 1.03
CTSA-204ENST00000372484 CEP126Q9P2H0 1117 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 TBC1D2BQ9UPU7 963 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 RFX7Q2KHR2 1363 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 CDHR2Q9BYE9 1310 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 SLIT2O94813 1529 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 A0A1B0GUL7 405 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 CSF1RP07333 972 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 AK2P54819 239 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 IFIT5Q13325 482 aaKnown RBP21.5■■□□□ 1.03
CTSA-204ENST00000372484 ADCK5Q3MIX3 580 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 TAF7LQ5H9L4 462 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 CREB3L3Q68CJ9 461 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 BARGINQ6ZT62 677 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 DDX46Q7L014 1031 aaKnown RBP21.5■■□□□ 1.03
CTSA-204ENST00000372484 SYNE4Q8N205 404 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 FBXO3Q9UK99 471 aa21.5■■□□□ 1.03
CTSA-204ENST00000372484 ERVV-1B6SEH8 477 aa21.49■■□□□ 1.03
CTSA-204ENST00000372484 ZNF589Q86UQ0 364 aaPredicted RBP21.49■■□□□ 1.03
CTSA-204ENST00000372484 SKOR2Q2VWA4 1001 aaPredicted RBP21.49■■□□□ 1.03
CTSA-204ENST00000372484 TM6SF1Q9BZW5 370 aa21.49■■□□□ 1.03
CTSA-204ENST00000372484 ZDHHC9Q9Y397 364 aa21.49■■□□□ 1.03
CTSA-204ENST00000372484 CPA1P15085 419 aa21.48■■□□□ 1.03
CTSA-204ENST00000372484 ATP6V1AP38606 617 aa21.48■■□□□ 1.03
CTSA-204ENST00000372484 MYH3P11055 1940 aa21.48■■□□□ 1.03
CTSA-204ENST00000372484 RNF20Q5VTR2 975 aa21.47■■□□□ 1.03
CTSA-204ENST00000372484 KBTBD3Q8NAB2 608 aa21.47■■□□□ 1.03
CTSA-204ENST00000372484 ZSWIM6Q9HCJ5 1215 aa21.47■■□□□ 1.03
CTSA-204ENST00000372484 TRMT112Q9UI30 125 aaKnown RBP21.47■■□□□ 1.03
CTSA-204ENST00000372484 LIMCH1Q9UPQ0 1083 aa21.47■■□□□ 1.03
CTSA-204ENST00000372484 CYP46A1Q9Y6A2 500 aa21.47■■□□□ 1.03
CTSA-204ENST00000372484 SLC27A2O14975 620 aa21.47■■□□□ 1.03
CTSA-204ENST00000372484 RUFY3Q7L099 469 aa21.47■■□□□ 1.03
CTSA-204ENST00000372484 PAG1Q9NWQ8 432 aa21.47■■□□□ 1.03
CTSA-204ENST00000372484 LOC102724428A0A0B4J2F2 783 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 GOLIM4O00461 696 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 SIK1P57059 783 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 VPS53Q5VIR6 699 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 PDRG1Q9NUG6 133 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 CCDC87Q9NVE4 849 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 AKAP2Q9Y2D5 859 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 IRS4O14654 1257 aaPredicted RBP21.46■■□□□ 1.03
CTSA-204ENST00000372484 TAF5LO75529 589 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 MCTP1Q6DN14 999 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 TTLL11Q8NHH1 800 aa21.46■■□□□ 1.03
CTSA-204ENST00000372484 JCADQ9P266 1359 aa21.45■■□□□ 1.02
CTSA-204ENST00000372484 IFIT1P09914 478 aaKnown RBP21.45■■□□□ 1.02
CTSA-204ENST00000372484 CRKLP46109 303 aaKnown RBP21.45■■□□□ 1.02
CTSA-204ENST00000372484 EIF5P55010 431 aaKnown RBP21.45■■□□□ 1.02
CTSA-204ENST00000372484 CTSWP56202 376 aa21.45■■□□□ 1.02
CTSA-204ENST00000372484 INTS5Q6P9B9 1019 aaKnown RBP21.45■■□□□ 1.02
CTSA-204ENST00000372484 LARP6Q9BRS8 491 aaKnown RBP21.45■■□□□ 1.02
CTSA-204ENST00000372484 CHGBP05060 677 aa21.44■■□□□ 1.02
CTSA-204ENST00000372484 ITGA6P23229 1130 aa21.44■■□□□ 1.02
CTSA-204ENST00000372484 MCMDC2Q4G0Z9 681 aa21.44■■□□□ 1.02
CTSA-204ENST00000372484 GREM2Q9H772 168 aa21.44■■□□□ 1.02
CTSA-204ENST00000372484 PALLDQ8WX93 1383 aa21.44■■□□□ 1.02
CTSA-204ENST00000372484 PSMA5P28066 241 aa21.44■■□□□ 1.02
CTSA-204ENST00000372484 UBN2Q6ZU65 1347 aa21.44■■□□□ 1.02
CTSA-204ENST00000372484 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
CTSA-204ENST00000372484 GORABQ5T7V8 394 aa21.43■■□□□ 1.02
CTSA-204ENST00000372484 ZNF34Q8IZ26 560 aa21.43■■□□□ 1.02
CTSA-204ENST00000372484 SEC62Q99442 399 aaKnown RBP21.43■■□□□ 1.02
CTSA-204ENST00000372484 CCDC158Q5M9N0 1113 aa21.43■■□□□ 1.02
CTSA-204ENST00000372484 FOXD4L5Q5VV16 416 aaPredicted RBP21.43■■□□□ 1.02
CTSA-204ENST00000372484 LDHAL6AQ6ZMR3 332 aa21.43■■□□□ 1.02
CTSA-204ENST00000372484 FOXD4L4Q8WXT5 416 aaPredicted RBP21.43■■□□□ 1.02
CTSA-204ENST00000372484 HMG20BQ9P0W2 317 aa21.43■■□□□ 1.02
CTSA-204ENST00000372484 RPAP1Q9BWH6 1393 aaPredicted RBP21.43■■□□□ 1.02
CTSA-204ENST00000372484 ANKRD18BA2A2Z9 1011 aa21.42■■□□□ 1.02
CTSA-204ENST00000372484 BRD1O95696 1058 aa21.42■■□□□ 1.02
CTSA-204ENST00000372484 CCDC129Q6ZRS4 1044 aa21.42■■□□□ 1.02
CTSA-204ENST00000372484 SH3TC1Q8TE82 1336 aa21.41■■□□□ 1.02
CTSA-204ENST00000372484 PDE8AO60658 829 aa21.41■■□□□ 1.02
CTSA-204ENST00000372484 ITPK1Q13572 414 aa21.41■■□□□ 1.02
CTSA-204ENST00000372484 FAM98CQ17RN3 349 aaKnown RBP21.41■■□□□ 1.02
CTSA-204ENST00000372484 USPL1Q5W0Q7 1092 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms