RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 ZPR1O75312 459 aa15.63■□□□□ 0.09
PREX1-201ENST00000371941 HOXC9P31274 260 aa15.63■□□□□ 0.09
PREX1-201ENST00000371941 CEP135Q66GS9 1140 aa15.63■□□□□ 0.09
PREX1-201ENST00000371941 NOLC1Q14978 699 aaKnown RBP eCLIP15.63■□□□□ 0.09
PREX1-201ENST00000371941 KSR2Q6VAB6 950 aa15.62■□□□□ 0.09
PREX1-201ENST00000371941 ERCC4Q92889 916 aaPredicted RBP15.62■□□□□ 0.09
PREX1-201ENST00000371941 NCOA5Q9HCD5 579 aaKnown RBP15.62■□□□□ 0.09
PREX1-201ENST00000371941 WASF1Q92558 559 aa15.62■□□□□ 0.09
PREX1-201ENST00000371941 HMGB1P09429 215 aaKnown RBP15.62■□□□□ 0.09
PREX1-201ENST00000371941 DDX19AQ9NUU7 478 aaKnown RBP15.62■□□□□ 0.09
PREX1-201ENST00000371941 F8W031 263 aaPredicted RBP15.62■□□□□ 0.09
PREX1-201ENST00000371941 MCMDC2Q4G0Z9 681 aa15.62■□□□□ 0.09
PREX1-201ENST00000371941 ALG1Q9BT22 464 aa15.62■□□□□ 0.09
PREX1-201ENST00000371941 YTHDC2Q9H6S0 1430 aaKnown RBP15.61■□□□□ 0.09
PREX1-201ENST00000371941 KCNQ3O43525 872 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 NBPF7P0C2Y1 421 aaPredicted RBP15.61■□□□□ 0.09
PREX1-201ENST00000371941 ADGBQ8N7X0 1667 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 LMOD1P29536 600 aaPredicted RBP15.61■□□□□ 0.09
PREX1-201ENST00000371941 SYCP1Q15431 976 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 NCOA7Q8NI08 942 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 PLIN2Q99541 437 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 USP19O94966 1318 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 UGGT1Q9NYU2 1555 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 MFSD6Q6ZSS7 791 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 TAX1BP1Q86VP1 789 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 CCDC96Q2M329 555 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 PAG1Q9NWQ8 432 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 MATR3P43243 847 aaKnown RBP eCLIP15.61■□□□□ 0.09
PREX1-201ENST00000371941 ARHGEF12Q9NZN5 1544 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 CEP131Q9UPN4 1083 aa15.61■□□□□ 0.09
PREX1-201ENST00000371941 GSPT1P15170 499 aaKnown RBP15.6■□□□□ 0.09
PREX1-201ENST00000371941 SLC9C2Q5TAH2 1124 aa15.6■□□□□ 0.09
PREX1-201ENST00000371941 OTUD7BQ6GQQ9 843 aa15.6■□□□□ 0.09
PREX1-201ENST00000371941 KCNA6P17658 529 aa15.6■□□□□ 0.09
PREX1-201ENST00000371941 SNW1Q13573 536 aaKnown RBP15.6■□□□□ 0.09
PREX1-201ENST00000371941 SPTY2D1Q68D10 685 aaPredicted RBP15.6■□□□□ 0.09
PREX1-201ENST00000371941 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.6■□□□□ 0.09
PREX1-201ENST00000371941 TMCO3Q6UWJ1 677 aa15.6■□□□□ 0.09
PREX1-201ENST00000371941 ZNF444Q8N0Y2 327 aaPredicted RBP15.6■□□□□ 0.09
PREX1-201ENST00000371941 CTCFLQ8NI51 663 aaPredicted RBP15.6■□□□□ 0.09
PREX1-201ENST00000371941 ZNF518AQ6AHZ1 1483 aa15.6■□□□□ 0.09
PREX1-201ENST00000371941 BLMP54132 1417 aaPredicted RBP15.6■□□□□ 0.09
PREX1-201ENST00000371941 AKAP4Q5JQC9 854 aa15.6■□□□□ 0.09
PREX1-201ENST00000371941 SPECC1Q5M775 1068 aa15.6■□□□□ 0.09
PREX1-201ENST00000371941 PDCL3Q9H2J4 239 aa15.6■□□□□ 0.09
PREX1-201ENST00000371941 MMRN2Q9H8L6 949 aa15.6■□□□□ 0.09
PREX1-201ENST00000371941 SYT1P21579 422 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 SLC4A4Q9Y6R1 1079 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 TYRO3Q06418 890 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 RUFY3Q7L099 469 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 SEC63Q9UGP8 760 aaKnown RBP15.59■□□□□ 0.09
PREX1-201ENST00000371941 SYKP43405 635 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 STX17P56962 302 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 GPIHBP1Q8IV16 184 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.59■□□□□ 0.09
PREX1-201ENST00000371941 TSPY2A6NKD2 308 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 IQCA1Q86XH1 822 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 MAP3K5Q99683 1374 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 RNF123Q5XPI4 1314 aa15.59■□□□□ 0.09
PREX1-201ENST00000371941 SETD1BQ9UPS6 1966 aaKnown RBP15.58■□□□□ 0.09
PREX1-201ENST00000371941 A0A1B0GVL5 298 aa15.58■□□□□ 0.09
PREX1-201ENST00000371941 CCDC66A2RUB6 948 aa15.58■□□□□ 0.09
PREX1-201ENST00000371941 EXOC5O00471 708 aa15.58■□□□□ 0.09
PREX1-201ENST00000371941 CLCN1P35523 988 aa15.58■□□□□ 0.09
PREX1-201ENST00000371941 CHMP4BP1P59074 171 aa15.58■□□□□ 0.09
PREX1-201ENST00000371941 CATIPQ7Z7H3 387 aa15.58■□□□□ 0.09
PREX1-201ENST00000371941 FAM170AA1A519 330 aa15.58■□□□□ 0.09
PREX1-201ENST00000371941 MCM5P33992 734 aa15.58■□□□□ 0.09
PREX1-201ENST00000371941 ZCRB1Q8TBF4 217 aaKnown RBP15.58■□□□□ 0.08
PREX1-201ENST00000371941 KDM5AP29375 1690 aaKnown RBP15.58■□□□□ 0.08
PREX1-201ENST00000371941 UHRF1BP1LA0JNW5 1464 aa15.58■□□□□ 0.08
PREX1-201ENST00000371941 PRC1O43663 620 aa15.58■□□□□ 0.08
PREX1-201ENST00000371941 SSR1P43307 286 aaKnown RBP15.58■□□□□ 0.08
PREX1-201ENST00000371941 UBASH3AP57075 661 aa15.58■□□□□ 0.08
PREX1-201ENST00000371941 CCDC24Q8N4L8 307 aa15.58■□□□□ 0.08
PREX1-201ENST00000371941 UIMC1Q96RL1 719 aa15.58■□□□□ 0.08
PREX1-201ENST00000371941 CYP7A1P22680 504 aa15.58■□□□□ 0.08
PREX1-201ENST00000371941 DRC1Q96MC2 740 aa15.58■□□□□ 0.08
PREX1-201ENST00000371941 SNX14Q9Y5W7 946 aa15.58■□□□□ 0.08
PREX1-201ENST00000371941 SPATA31E1Q6ZUB1 1445 aa15.58■□□□□ 0.08
PREX1-201ENST00000371941 SKILP12757 684 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 CEP170Q5SW79 1584 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 CWC15Q9P013 229 aaKnown RBP15.57■□□□□ 0.08
PREX1-201ENST00000371941 TSC1Q92574 1164 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 KDM5CP41229 1560 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 MAGEB6Q8N7X4 407 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 CGNQ9P2M7 1197 aaKnown RBP15.57■□□□□ 0.08
PREX1-201ENST00000371941 CD2BP2O95400 341 aaKnown RBP15.57■□□□□ 0.08
PREX1-201ENST00000371941 GTF2F1P35269 517 aaKnown RBP eCLIP15.57■□□□□ 0.08
PREX1-201ENST00000371941 CRACR2BQ8N4Y2 399 aaPredicted RBP15.57■□□□□ 0.08
PREX1-201ENST00000371941 SAMD9Q5K651 1589 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 C6orf229H3BNL8 230 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 KIF5CO60282 957 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 ATP2B3Q16720 1220 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 ORAI2Q96SN7 254 aa15.57■□□□□ 0.08
PREX1-201ENST00000371941 SRRTQ9BXP5 876 aaKnown RBP15.57■□□□□ 0.08
PREX1-201ENST00000371941 BCCIPQ9P287 314 aaKnown RBP eCLIP15.57■□□□□ 0.08
PREX1-201ENST00000371941 RNMTO43148 476 aaKnown RBP15.56■□□□□ 0.08
PREX1-201ENST00000371941 IDEP14735 1019 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms