RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 A0A0D9SFI3 127 aa15.39■□□□□ 0.05
GPC3-201ENST00000370818 HLFQ16534 295 aa15.39■□□□□ 0.05
GPC3-201ENST00000370818 ZNF594Q96JF6 807 aaPredicted RBP15.39■□□□□ 0.05
GPC3-201ENST00000370818 FSD1Q9BTV5 496 aa15.39■□□□□ 0.05
GPC3-201ENST00000370818 ZBTB1Q9Y2K1 713 aa15.39■□□□□ 0.05
GPC3-201ENST00000370818 THRAP3Q9Y2W1 955 aaKnown RBP15.39■□□□□ 0.05
GPC3-201ENST00000370818 CCDC171Q6TFL3 1326 aa15.39■□□□□ 0.05
GPC3-201ENST00000370818 NUCB2P80303 420 aa15.39■□□□□ 0.05
GPC3-201ENST00000370818 LRRC24Q50LG9 513 aa15.39■□□□□ 0.05
GPC3-201ENST00000370818 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
GPC3-201ENST00000370818 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.39■□□□□ 0.05
GPC3-201ENST00000370818 IL15P40933 162 aaPredicted RBP15.38■□□□□ 0.05
GPC3-201ENST00000370818 NOL8Q76FK4 1167 aaKnown RBP15.38■□□□□ 0.05
GPC3-201ENST00000370818 KCNB2Q92953 911 aa15.38■□□□□ 0.05
GPC3-201ENST00000370818 FAM89AQ96GI7 184 aa15.38■□□□□ 0.05
GPC3-201ENST00000370818 TTC14Q96N46 770 aa15.38■□□□□ 0.05
GPC3-201ENST00000370818 NDUFB9Q9Y6M9 179 aa15.38■□□□□ 0.05
GPC3-201ENST00000370818 EYA2O00167 538 aa15.38■□□□□ 0.05
GPC3-201ENST00000370818 PCCAP05165 728 aaPredicted RBP15.38■□□□□ 0.05
GPC3-201ENST00000370818 DDB1Q16531 1140 aa15.38■□□□□ 0.05
GPC3-201ENST00000370818 SKOR2Q2VWA4 1001 aaPredicted RBP15.38■□□□□ 0.05
GPC3-201ENST00000370818 R3HCC1Q9Y3T6 440 aaKnown RBP15.38■□□□□ 0.05
GPC3-201ENST00000370818 NUTM2BA6NNL0 878 aaPredicted RBP15.37■□□□□ 0.05
GPC3-201ENST00000370818 NUTM2EB1AL46 878 aaPredicted RBP15.37■□□□□ 0.05
GPC3-201ENST00000370818 MSNP26038 577 aaKnown RBP15.37■□□□□ 0.05
GPC3-201ENST00000370818 NECTIN1Q15223 517 aa15.37■□□□□ 0.05
GPC3-201ENST00000370818 NUTM2AQ8IVF1 878 aaPredicted RBP15.37■□□□□ 0.05
GPC3-201ENST00000370818 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
GPC3-201ENST00000370818 MAP4K1Q92918 833 aa15.37■□□□□ 0.05
GPC3-201ENST00000370818 GPR108Q9NPR9 543 aa15.37■□□□□ 0.05
GPC3-201ENST00000370818 ZDHHC9Q9Y397 364 aa15.37■□□□□ 0.05
GPC3-201ENST00000370818 MED23Q9ULK4 1368 aa15.37■□□□□ 0.05
GPC3-201ENST00000370818 HAUS7Q99871 368 aa15.37■□□□□ 0.05
GPC3-201ENST00000370818 PLA2G12BQ9BX93 195 aa15.37■□□□□ 0.05
GPC3-201ENST00000370818 PUS3Q9BZE2 481 aaKnown RBP15.37■□□□□ 0.05
GPC3-201ENST00000370818 SPATA31A5Q5VU36 1347 aa15.37■□□□□ 0.05
GPC3-201ENST00000370818 SPATA31A7Q8IWB4 1347 aa15.37■□□□□ 0.05
GPC3-201ENST00000370818 CIAO1O76071 339 aa15.36■□□□□ 0.05
GPC3-201ENST00000370818 BAG4O95429 457 aaKnown RBP15.36■□□□□ 0.05
GPC3-201ENST00000370818 TIMM10P62072 90 aa15.36■□□□□ 0.05
GPC3-201ENST00000370818 PIP4K2BP78356 416 aa15.36■□□□□ 0.05
GPC3-201ENST00000370818 PRPF40BQ6NWY9 871 aaKnown RBP15.36■□□□□ 0.05
GPC3-201ENST00000370818 SYNE4Q8N205 404 aa15.36■□□□□ 0.05
GPC3-201ENST00000370818 MARCH10Q8NA82 808 aaPredicted RBP15.36■□□□□ 0.05
GPC3-201ENST00000370818 INTS4Q96HW7 963 aaKnown RBP15.36■□□□□ 0.05
GPC3-201ENST00000370818 DOT1LQ8TEK3 1739 aa15.36■□□□□ 0.05
GPC3-201ENST00000370818 NASPP49321 788 aaPredicted RBP15.36■□□□□ 0.05
GPC3-201ENST00000370818 NLRP10Q86W26 655 aa15.36■□□□□ 0.05
GPC3-201ENST00000370818 CSF1RP07333 972 aa15.35■□□□□ 0.05
GPC3-201ENST00000370818 GPTP24298 496 aa15.35■□□□□ 0.05
GPC3-201ENST00000370818 ADCK5Q3MIX3 580 aa15.35■□□□□ 0.05
GPC3-201ENST00000370818 ZNF589Q86UQ0 364 aaPredicted RBP15.35■□□□□ 0.05
GPC3-201ENST00000370818 RBM8AQ9Y5S9 174 aaKnown RBP15.35■□□□□ 0.05
GPC3-201ENST00000370818 KAT6BQ8WYB5 2073 aa15.35■□□□□ 0.05
GPC3-201ENST00000370818 SLIT2O94813 1529 aa15.35■□□□□ 0.05
GPC3-201ENST00000370818 NEUROD6Q96NK8 337 aa15.35■□□□□ 0.05
GPC3-201ENST00000370818 ZNF609O15014 1411 aa15.35■□□□□ 0.05
GPC3-201ENST00000370818 CHGBP05060 677 aa15.34■□□□□ 0.05
GPC3-201ENST00000370818 CPA1P15085 419 aa15.34■□□□□ 0.05
GPC3-201ENST00000370818 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
GPC3-201ENST00000370818 DNAJC2Q99543 621 aaKnown RBP15.34■□□□□ 0.05
GPC3-201ENST00000370818 JCADQ9P266 1359 aa15.34■□□□□ 0.05
GPC3-201ENST00000370818 CASTP20810 708 aaKnown RBP15.34■□□□□ 0.05
GPC3-201ENST00000370818 IL6STP40189 918 aaPredicted RBP15.34■□□□□ 0.05
GPC3-201ENST00000370818 AK2P54819 239 aa15.34■□□□□ 0.05
GPC3-201ENST00000370818 CREB3L3Q68CJ9 461 aa15.34■□□□□ 0.05
GPC3-201ENST00000370818 ACSBG1Q96GR2 724 aa15.34■□□□□ 0.05
GPC3-201ENST00000370818 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
GPC3-201ENST00000370818 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
GPC3-201ENST00000370818 RFX7Q2KHR2 1363 aa15.34■□□□□ 0.05
GPC3-201ENST00000370818 TOM1O60784 492 aa15.33■□□□□ 0.05
GPC3-201ENST00000370818 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.05
GPC3-201ENST00000370818 RUFY3Q7L099 469 aa15.33■□□□□ 0.05
GPC3-201ENST00000370818 MTERF4Q7Z6M4 381 aaKnown RBP15.33■□□□□ 0.05
GPC3-201ENST00000370818 TM6SF1Q9BZW5 370 aa15.33■□□□□ 0.05
GPC3-201ENST00000370818 CDHR2Q9BYE9 1310 aa15.33■□□□□ 0.05
GPC3-201ENST00000370818 A0A1B0GUL7 405 aa15.33■□□□□ 0.04
GPC3-201ENST00000370818 BARGINQ6ZT62 677 aa15.33■□□□□ 0.04
GPC3-201ENST00000370818 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
GPC3-201ENST00000370818 ZSWIM6Q9HCJ5 1215 aa15.33■□□□□ 0.04
GPC3-201ENST00000370818 ZHX1Q9UKY1 873 aaPredicted RBP15.33■□□□□ 0.04
GPC3-201ENST00000370818 TBC1D2BQ9UPU7 963 aa15.33■□□□□ 0.04
GPC3-201ENST00000370818 UQCRHLA0A096LP55 91 aa15.32■□□□□ 0.04
GPC3-201ENST00000370818 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
GPC3-201ENST00000370818 UQCRHP07919 91 aa15.32■□□□□ 0.04
GPC3-201ENST00000370818 JAKMIP1Q96N16 626 aaKnown RBP15.32■□□□□ 0.04
GPC3-201ENST00000370818 SLC27A2O14975 620 aa15.32■□□□□ 0.04
GPC3-201ENST00000370818 ZNF500O60304 480 aaPredicted RBP15.32■□□□□ 0.04
GPC3-201ENST00000370818 TAF5LO75529 589 aa15.32■□□□□ 0.04
GPC3-201ENST00000370818 INTS5Q6P9B9 1019 aaKnown RBP15.32■□□□□ 0.04
GPC3-201ENST00000370818 DZIP3Q86Y13 1208 aaKnown RBP15.32■□□□□ 0.04
GPC3-201ENST00000370818 KBTBD3Q8NAB2 608 aa15.32■□□□□ 0.04
GPC3-201ENST00000370818 FBXO3Q9UK99 471 aa15.32■□□□□ 0.04
GPC3-201ENST00000370818 COL9A3Q14050 684 aaPredicted RBP15.31■□□□□ 0.04
GPC3-201ENST00000370818 HS1BP3Q53T59 392 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 ANP32BQ92688 251 aaKnown RBP15.31■□□□□ 0.04
GPC3-201ENST00000370818 LARP6Q9BRS8 491 aaKnown RBP15.31■□□□□ 0.04
GPC3-201ENST00000370818 CEP126Q9P2H0 1117 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 UBN2Q6ZU65 1347 aa15.31■□□□□ 0.04
GPC3-201ENST00000370818 ZKSCAN1P17029 563 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms