RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 ATXN7O15265 892 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 ATP2B4P23634 1241 aa7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 TNP2Q05952 138 aa7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 MLECQ14165 292 aa7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 RTN1Q16799 776 aa7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 FIGNL1Q6PIW4 674 aa7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 HSH2DQ96JZ2 352 aa7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 TRERF1Q96PN7 1200 aa7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 ATXN7L1Q9ULK2 861 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 BCS1LQ9Y276 419 aa7.59□□□□□ -1.19
ECHDC1-204ENST00000368292 ZMYM4Q5VZL5 1548 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 EFSO43281 561 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 FAM157BP0CG42 384 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 SSFA2P28290 1259 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 PIP4K2BP78356 416 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 KCNA1Q09470 495 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 PHLDB3Q6NSJ2 640 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 COL26A1Q96A83 441 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 MYO19Q96H55 970 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 LRFN2Q9ULH4 789 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 ABCA8O94911 1581 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 IGF1RP08069 1367 aa7.58□□□□□ -1.2
ECHDC1-204ENST00000368292 MAPTP10636 758 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 SCNN1AP37088 669 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 CTBSQ01459 385 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 COX20Q5RI15 118 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 VTI1AQ96AJ9 217 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 SAP130Q9H0E3 1048 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 MBIPQ9NS73 344 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 KLK14Q9P0G3 267 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 GJA3Q9Y6H8 435 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 AKNAQ7Z591 1439 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 ZFYVE16Q7Z3T8 1539 aa7.57□□□□□ -1.2
ECHDC1-204ENST00000368292 FHOD3Q2V2M9 1422 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 DCDC2BA2VCK2 349 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 C2CD2LO14523 706 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 SLURP2P0DP57 97 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 MX2P20592 715 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 FGFR3P22607 806 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 SRSF11Q05519 484 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 MKNK1Q9BUB5 465 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 NEUROD4Q9HD90 331 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 STRN4Q9NRL3 753 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 ANKIB1Q9P2G1 1089 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 DMGDHQ9UI17 866 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 PHF24Q9UPV7 400 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 C3P01024 1663 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 UGGT2Q9NYU1 1516 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 CAMSAP1Q5T5Y3 1602 aa7.56□□□□□ -1.2
ECHDC1-204ENST00000368292 KHNYNO15037 678 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-204ENST00000368292 ADAMTS2O95450 1211 aa7.55□□□□□ -1.2
ECHDC1-204ENST00000368292 HSP90B1P14625 803 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-204ENST00000368292 DGKZQ13574 1117 aa7.55□□□□□ -1.2
ECHDC1-204ENST00000368292 CHMP4AQ9BY43 222 aa7.55□□□□□ -1.2
ECHDC1-204ENST00000368292 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.2
ECHDC1-204ENST00000368292 EFCAB5A4FU69 1503 aa7.54□□□□□ -1.2
ECHDC1-204ENST00000368292 PATL2C9JE40 543 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-204ENST00000368292 TYRO3Q06418 890 aa7.54□□□□□ -1.2
ECHDC1-204ENST00000368292 NAA30Q147X3 362 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-204ENST00000368292 GRIN2CQ14957 1233 aa7.54□□□□□ -1.2
ECHDC1-204ENST00000368292 C11orf91Q3C1V1 193 aa7.54□□□□□ -1.2
ECHDC1-204ENST00000368292 BTLAQ7Z6A9 289 aa7.54□□□□□ -1.2
ECHDC1-204ENST00000368292 SEPT3Q9UH03 358 aa7.54□□□□□ -1.2
ECHDC1-204ENST00000368292 TGFBR3LH3BV60 316 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 TNFRSF10BO14763 440 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 PTCD1O75127 700 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 CD33P20138 364 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 SFSWAPQ12872 951 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 LAMC2Q13753 1193 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 HIF1AQ16665 826 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 FAM26DQ5JW98 314 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 FAM182BQ5T319 152 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 TMCO4Q5TGY1 634 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 IER5Q5VY09 327 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 C16orf46Q6P387 395 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 WHAMMQ8TF30 809 aa7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 DENND4BO75064 1496 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-204ENST00000368292 GRNP28799 593 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-204ENST00000368292 INSM1Q01101 510 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-204ENST00000368292 CEP63Q96MT8 703 aa7.52□□□□□ -1.21
ECHDC1-204ENST00000368292 IVNS1ABPQ9Y6Y0 642 aa7.52□□□□□ -1.21
ECHDC1-204ENST00000368292 HECW1Q76N89 1606 aa7.52□□□□□ -1.21
ECHDC1-204ENST00000368292 KCNQ4P56696 695 aa7.51□□□□□ -1.21
ECHDC1-204ENST00000368292 ZNF385CQ66K41 422 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-204ENST00000368292 ZSCAN1Q8NBB4 408 aa7.51□□□□□ -1.21
ECHDC1-204ENST00000368292 UBE2Q2Q8WVN8 375 aa7.51□□□□□ -1.21
ECHDC1-204ENST00000368292 ACDQ96AP0 544 aa7.51□□□□□ -1.21
ECHDC1-204ENST00000368292 IFT43Q96FT9 208 aa7.51□□□□□ -1.21
ECHDC1-204ENST00000368292 BCL11AQ9H165 835 aa7.51□□□□□ -1.21
ECHDC1-204ENST00000368292 BRD7Q9NPI1 651 aa7.51□□□□□ -1.21
ECHDC1-204ENST00000368292 MARK1Q9P0L2 795 aa7.51□□□□□ -1.21
ECHDC1-204ENST00000368292 OPLAHO14841 1288 aa7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 MICAL2O94851 1124 aa7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 BMP4P12644 408 aa7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 INPP5BP32019 993 aa7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 MAP2K3P46734 347 aa7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 MFAP1P55081 439 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 LYPD4Q6UWN0 246 aa7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 ETFBKMTQ8IXQ9 262 aa7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 RGS22Q8NE09 1264 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms