RNA–Protein interactions for RNA: ENST00000367378.5

PCMT1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-201ENST00000367378 PGAP2Q9UHJ9 254 aa28.34■■■□□ 2.13
PCMT1-201ENST00000367378 HIRAP54198 1017 aaPredicted RBP28.33■■■□□ 2.13
PCMT1-201ENST00000367378 KIAA2012Q0VF49 1180 aa28.33■■■□□ 2.13
PCMT1-201ENST00000367378 CIAPIN1Q6FI81 312 aa28.33■■■□□ 2.13
PCMT1-201ENST00000367378 NLRP10Q86W26 655 aa28.33■■■□□ 2.13
PCMT1-201ENST00000367378 PNNQ9H307 717 aaKnown RBP28.33■■■□□ 2.13
PCMT1-201ENST00000367378 RAD17O75943 681 aa28.32■■■□□ 2.12
PCMT1-201ENST00000367378 COPS6Q7L5N1 327 aa28.32■■■□□ 2.12
PCMT1-201ENST00000367378 AIMP1Q12904 312 aaKnown RBP28.31■■■□□ 2.12
PCMT1-201ENST00000367378 NECTIN2Q92692 538 aa28.31■■■□□ 2.12
PCMT1-201ENST00000367378 DUOX1Q9NRD9 1551 aa28.3■■■□□ 2.12
PCMT1-201ENST00000367378 SHTN1A0MZ66 631 aa28.3■■■□□ 2.12
PCMT1-201ENST00000367378 CCDC85CA6NKD9 419 aa28.3■■■□□ 2.12
PCMT1-201ENST00000367378 RIPK4P57078 832 aa28.3■■■□□ 2.12
PCMT1-201ENST00000367378 TRPM4Q8TD43 1214 aa28.3■■■□□ 2.12
PCMT1-201ENST00000367378 XAGE3Q8WTP9 111 aa28.3■■■□□ 2.12
PCMT1-201ENST00000367378 BCL2L13Q9BXK5 485 aa28.3■■■□□ 2.12
PCMT1-201ENST00000367378 CASP8AP2Q9UKL3 1982 aa28.3■■■□□ 2.12
PCMT1-201ENST00000367378 CDHR2Q9BYE9 1310 aa28.29■■■□□ 2.12
PCMT1-201ENST00000367378 DDX46Q7L014 1031 aaKnown RBP28.29■■■□□ 2.12
PCMT1-201ENST00000367378 YDJCA8MPS7 323 aa28.28■■■□□ 2.12
PCMT1-201ENST00000367378 GRAPQ13588 217 aa28.28■■■□□ 2.12
PCMT1-201ENST00000367378 TNIP1Q15025 636 aa28.28■■■□□ 2.12
PCMT1-201ENST00000367378 HSP90AB3PQ58FF7 597 aa28.28■■■□□ 2.12
PCMT1-201ENST00000367378 GRAPLQ8TC17 118 aaPredicted RBP28.28■■■□□ 2.12
PCMT1-201ENST00000367378 ZNF408Q9H9D4 720 aa28.28■■■□□ 2.12
PCMT1-201ENST00000367378 TRMT112Q9UI30 125 aaKnown RBP28.28■■■□□ 2.12
PCMT1-201ENST00000367378 LRRC37AA6NMS7 1700 aa28.27■■■□□ 2.12
PCMT1-201ENST00000367378 DDX60Q8IY21 1712 aaKnown RBP28.27■■■□□ 2.12
PCMT1-201ENST00000367378 TCIRG1Q13488 830 aa28.27■■■□□ 2.12
PCMT1-201ENST00000367378 ZC3H15Q8WU90 426 aaKnown RBP28.27■■■□□ 2.12
PCMT1-201ENST00000367378 ZNF428Q96B54 188 aa28.27■■■□□ 2.12
PCMT1-201ENST00000367378 HHIPL1Q96JK4 782 aa28.27■■■□□ 2.12
PCMT1-201ENST00000367378 BABAM1Q9NWV8 329 aa28.27■■■□□ 2.12
PCMT1-201ENST00000367378 CNOT7Q9UIV1 285 aaKnown RBP28.27■■■□□ 2.12
PCMT1-201ENST00000367378 SH3TC1Q8TE82 1336 aa28.26■■■□□ 2.11
PCMT1-201ENST00000367378 CDC37L1Q7L3B6 337 aa28.25■■■□□ 2.11
PCMT1-201ENST00000367378 POLR2AP24928 1970 aaKnown RBP28.23■■■□□ 2.11
PCMT1-201ENST00000367378 BRPF1P55201 1214 aaPredicted RBP28.23■■■□□ 2.11
PCMT1-201ENST00000367378 KRT24Q2M2I5 525 aa28.23■■■□□ 2.11
PCMT1-201ENST00000367378 DLK2Q6UY11 383 aa28.23■■■□□ 2.11
PCMT1-201ENST00000367378 ZBTB12Q9Y330 459 aaPredicted RBP28.23■■■□□ 2.11
PCMT1-201ENST00000367378 CA12O43570 354 aa28.22■■■□□ 2.11
PCMT1-201ENST00000367378 TMPOP42166 694 aaKnown RBP28.22■■■□□ 2.11
PCMT1-201ENST00000367378 RGS19P49795 217 aa28.22■■■□□ 2.11
PCMT1-201ENST00000367378 USP48Q86UV5 1035 aa28.22■■■□□ 2.11
PCMT1-201ENST00000367378 MICALL2Q8IY33 904 aa28.22■■■□□ 2.11
PCMT1-201ENST00000367378 COL4A1P02462 1669 aa28.22■■■□□ 2.11
PCMT1-201ENST00000367378 H7C1D1 291 aa28.21■■■□□ 2.11
PCMT1-201ENST00000367378 MLLT1Q03111 559 aaPredicted RBP28.21■■■□□ 2.11
PCMT1-201ENST00000367378 ZIC5Q96T25 663 aa28.21■■■□□ 2.11
PCMT1-201ENST00000367378 MCOLN1Q9GZU1 580 aa28.21■■■□□ 2.11
PCMT1-201ENST00000367378 SLC34A2O95436 690 aa28.19■■■□□ 2.1
PCMT1-201ENST00000367378 SAMD7Q7Z3H4 446 aa28.19■■■□□ 2.1
PCMT1-201ENST00000367378 TMC4Q7Z404 712 aa28.19■■■□□ 2.1
PCMT1-201ENST00000367378 PSMD14O00487 310 aa28.18■■■□□ 2.1
PCMT1-201ENST00000367378 WASHC4Q2M389 1173 aa28.18■■■□□ 2.1
PCMT1-201ENST00000367378 CELF1Q92879 486 aaKnown RBP28.18■■■□□ 2.1
PCMT1-201ENST00000367378 DBNDD1Q9H9R9 158 aa28.18■■■□□ 2.1
PCMT1-201ENST00000367378 CHPF2Q9P2E5 772 aa28.18■■■□□ 2.1
PCMT1-201ENST00000367378 EGFRP00533 1210 aa28.17■■■□□ 2.1
PCMT1-201ENST00000367378 LMOD3Q0VAK6 560 aa28.17■■■□□ 2.1
PCMT1-201ENST00000367378 DPF2Q92785 391 aa28.17■■■□□ 2.1
PCMT1-201ENST00000367378 NSFL1CQ9UNZ2 370 aaKnown RBP28.17■■■□□ 2.1
PCMT1-201ENST00000367378 CHL1O00533 1208 aa28.16■■■□□ 2.1
PCMT1-201ENST00000367378 RIMBP2O15034 1052 aa28.16■■■□□ 2.1
PCMT1-201ENST00000367378 HUNKP57058 714 aa28.16■■■□□ 2.1
PCMT1-201ENST00000367378 FAM89AQ96GI7 184 aa28.16■■■□□ 2.1
PCMT1-201ENST00000367378 NOGQ13253 232 aa28.15■■■□□ 2.1
PCMT1-201ENST00000367378 NEUROD2Q15784 382 aa28.15■■■□□ 2.1
PCMT1-201ENST00000367378 TBC1D10BQ4KMP7 808 aaPredicted RBP28.15■■■□□ 2.1
PCMT1-201ENST00000367378 KCNQ5Q9NR82 932 aa28.15■■■□□ 2.1
PCMT1-201ENST00000367378 POLLQ9UGP5 575 aa28.15■■■□□ 2.1
PCMT1-201ENST00000367378 GPSM2P81274 684 aa28.14■■■□□ 2.1
PCMT1-201ENST00000367378 SF3B3Q15393 1217 aaKnown RBP28.14■■■□□ 2.1
PCMT1-201ENST00000367378 PLBD2Q8NHP8 589 aa28.14■■■□□ 2.1
PCMT1-201ENST00000367378 ISCA1Q9BUE6 129 aa28.14■■■□□ 2.1
PCMT1-201ENST00000367378 ATP5J2-PTCD1G3V325 749 aa28.13■■■□□ 2.09
PCMT1-201ENST00000367378 DGKZQ13574 1117 aa28.13■■■□□ 2.09
PCMT1-201ENST00000367378 CCDC146Q8IYE0 955 aa28.13■■■□□ 2.09
PCMT1-201ENST00000367378 CFAP44Q96MT7 982 aa28.13■■■□□ 2.09
PCMT1-201ENST00000367378 LAS1LQ9Y4W2 734 aaKnown RBP28.13■■■□□ 2.09
PCMT1-201ENST00000367378 RTL9Q8NET4 1388 aa28.12■■■□□ 2.09
PCMT1-201ENST00000367378 C6orf229H3BNL8 230 aa28.12■■■□□ 2.09
PCMT1-201ENST00000367378 DOK7Q18PE1 504 aa28.12■■■□□ 2.09
PCMT1-201ENST00000367378 ANKRD13DQ6ZTN6 518 aa28.12■■■□□ 2.09
PCMT1-201ENST00000367378 KRT26Q7Z3Y9 468 aa28.12■■■□□ 2.09
PCMT1-201ENST00000367378 SCN9AQ15858 1988 aa28.11■■■□□ 2.09
PCMT1-201ENST00000367378 FAM155AB1AL88 458 aaPredicted RBP28.11■■■□□ 2.09
PCMT1-201ENST00000367378 ECE2O60344 883 aa28.11■■■□□ 2.09
PCMT1-201ENST00000367378 RTL5Q5HYW3 569 aaPredicted RBP28.11■■■□□ 2.09
PCMT1-201ENST00000367378 RBM26Q5T8P6 1007 aaKnown RBP28.11■■■□□ 2.09
PCMT1-201ENST00000367378 HDGFL1Q5TGJ6 251 aa28.11■■■□□ 2.09
PCMT1-201ENST00000367378 TRIM35Q9UPQ4 493 aa28.11■■■□□ 2.09
PCMT1-201ENST00000367378 ADM5C9JUS6 153 aa28.1■■■□□ 2.09
PCMT1-201ENST00000367378 RGMBQ6NW40 437 aa28.1■■■□□ 2.09
PCMT1-201ENST00000367378 GBA2Q9HCG7 927 aaPredicted RBP28.09■■■□□ 2.09
PCMT1-201ENST00000367378 RPS12P25398 132 aaKnown RBP28.08■■■□□ 2.09
PCMT1-201ENST00000367378 TBC1D16Q8TBP0 767 aa28.08■■■□□ 2.09
PCMT1-201ENST00000367378 RALBP1Q15311 655 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms