RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 AXIN2Q9Y2T1 843 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 KIF3AQ9Y496 699 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 BCL11BQ9C0K0 894 aaPredicted RBP24.6■■□□□ 1.53
TRIM3-202ENST00000359518 NR1I2O75469 434 aa24.6■■□□□ 1.53
TRIM3-202ENST00000359518 LEO1Q8WVC0 666 aaPredicted RBP24.6■■□□□ 1.53
TRIM3-202ENST00000359518 ORAI2Q96SN7 254 aa24.6■■□□□ 1.53
TRIM3-202ENST00000359518 CBX8Q9HC52 389 aa24.6■■□□□ 1.53
TRIM3-202ENST00000359518 HDAC5Q9UQL6 1122 aa24.6■■□□□ 1.53
TRIM3-202ENST00000359518 CCDC186Q7Z3E2 898 aa24.59■■□□□ 1.53
TRIM3-202ENST00000359518 KCNH5Q8NCM2 988 aa24.59■■□□□ 1.53
TRIM3-202ENST00000359518 DDX21Q9NR30 783 aaKnown RBP eCLIP24.59■■□□□ 1.53
TRIM3-202ENST00000359518 XAGE3Q8WTP9 111 aa24.59■■□□□ 1.53
TRIM3-202ENST00000359518 ARHGAP23Q9P227 1491 aa24.59■■□□□ 1.53
TRIM3-202ENST00000359518 TAF5LO75529 589 aa24.59■■□□□ 1.53
TRIM3-202ENST00000359518 PDIA6Q15084 440 aa24.59■■□□□ 1.53
TRIM3-202ENST00000359518 COPS6Q7L5N1 327 aa24.59■■□□□ 1.53
TRIM3-202ENST00000359518 MTERF4Q7Z6M4 381 aaKnown RBP24.59■■□□□ 1.53
TRIM3-202ENST00000359518 TRIM5Q9C035 493 aa24.59■■□□□ 1.53
TRIM3-202ENST00000359518 SLFNL1Q499Z3 407 aa24.58■■□□□ 1.53
TRIM3-202ENST00000359518 NPHP4O75161 1426 aaPredicted RBP24.58■■□□□ 1.53
TRIM3-202ENST00000359518 GOLGA6L6A8MZA4 724 aa24.57■■□□□ 1.52
TRIM3-202ENST00000359518 FGD1P98174 961 aa24.57■■□□□ 1.52
TRIM3-202ENST00000359518 ANKRD1Q15327 319 aa24.57■■□□□ 1.52
TRIM3-202ENST00000359518 BRF1Q92994 677 aa24.57■■□□□ 1.52
TRIM3-202ENST00000359518 SCAND2PQ9GZW5 306 aaPredicted RBP24.57■■□□□ 1.52
TRIM3-202ENST00000359518 DNAJC25Q9H1X3 360 aa24.57■■□□□ 1.52
TRIM3-202ENST00000359518 SLIT1O75093 1534 aa24.57■■□□□ 1.52
TRIM3-202ENST00000359518 NEXNQ0ZGT2 675 aa24.57■■□□□ 1.52
TRIM3-202ENST00000359518 PGBD1Q96JS3 809 aa24.57■■□□□ 1.52
TRIM3-202ENST00000359518 DBNLQ9UJU6 430 aaKnown RBP24.57■■□□□ 1.52
TRIM3-202ENST00000359518 RIOK3O14730 519 aaKnown RBP24.56■■□□□ 1.52
TRIM3-202ENST00000359518 BCL2L12Q9HB09 334 aa24.56■■□□□ 1.52
TRIM3-202ENST00000359518 CRYBG1Q9Y4K1 1723 aa24.56■■□□□ 1.52
TRIM3-202ENST00000359518 TFCP2Q12800 502 aa24.56■■□□□ 1.52
TRIM3-202ENST00000359518 Q6ZUG5 572 aa24.56■■□□□ 1.52
TRIM3-202ENST00000359518 MED1Q15648 1581 aaPredicted RBP24.56■■□□□ 1.52
TRIM3-202ENST00000359518 NEURL1BA8MQ27 555 aa24.56■■□□□ 1.52
TRIM3-202ENST00000359518 H3BQV1 296 aa24.56■■□□□ 1.52
TRIM3-202ENST00000359518 IFFO2Q5TF58 517 aa24.56■■□□□ 1.52
TRIM3-202ENST00000359518 DDX46Q7L014 1031 aaKnown RBP24.56■■□□□ 1.52
TRIM3-202ENST00000359518 KDM3BQ7LBC6 1761 aa24.55■■□□□ 1.52
TRIM3-202ENST00000359518 ATP5J2-PTCD1G3V325 749 aa24.55■■□□□ 1.52
TRIM3-202ENST00000359518 PTCD1O75127 700 aaKnown RBP24.55■■□□□ 1.52
TRIM3-202ENST00000359518 ZC3H6P61129 1189 aaKnown RBP24.55■■□□□ 1.52
TRIM3-202ENST00000359518 NAP1L2Q9ULW6 460 aaPredicted RBP24.55■■□□□ 1.52
TRIM3-202ENST00000359518 COL15A1P39059 1388 aa24.55■■□□□ 1.52
TRIM3-202ENST00000359518 A0A087WWV3 80 aa24.55■■□□□ 1.52
TRIM3-202ENST00000359518 GCKRQ14397 625 aa24.55■■□□□ 1.52
TRIM3-202ENST00000359518 CBX1P83916 185 aa24.54■■□□□ 1.52
TRIM3-202ENST00000359518 ARHGEF25Q86VW2 580 aa24.54■■□□□ 1.52
TRIM3-202ENST00000359518 NFATC2IPQ8NCF5 419 aa24.54■■□□□ 1.52
TRIM3-202ENST00000359518 NEK1Q96PY6 1258 aa24.54■■□□□ 1.52
TRIM3-202ENST00000359518 FTOQ9C0B1 505 aaKnown RBP eCLIP24.54■■□□□ 1.52
TRIM3-202ENST00000359518 MED23Q9ULK4 1368 aa24.54■■□□□ 1.52
TRIM3-202ENST00000359518 ELP1O95163 1332 aa24.54■■□□□ 1.52
TRIM3-202ENST00000359518 NPHP3Q7Z494 1330 aa24.54■■□□□ 1.52
TRIM3-202ENST00000359518 CHAF1AQ13111 956 aaPredicted RBP24.53■■□□□ 1.52
TRIM3-202ENST00000359518 UBE3BQ7Z3V4 1068 aa24.53■■□□□ 1.52
TRIM3-202ENST00000359518 C16orf45Q96MC5 204 aaPredicted RBP24.53■■□□□ 1.52
TRIM3-202ENST00000359518 CCDC94Q9BW85 323 aaPredicted RBP24.53■■□□□ 1.52
TRIM3-202ENST00000359518 ZNF165P49910 485 aa24.53■■□□□ 1.52
TRIM3-202ENST00000359518 DBNDD2Q9BQY9 259 aa24.53■■□□□ 1.52
TRIM3-202ENST00000359518 A0A0U1RQG5 324 aaPredicted RBP24.52■■□□□ 1.52
TRIM3-202ENST00000359518 ZNF790Q6PG37 636 aa24.52■■□□□ 1.52
TRIM3-202ENST00000359518 NFAT5O94916 1531 aa24.52■■□□□ 1.52
TRIM3-202ENST00000359518 PPP4R3BQ5MIZ7 849 aa24.52■■□□□ 1.52
TRIM3-202ENST00000359518 FBXW7Q969H0 707 aa24.52■■□□□ 1.52
TRIM3-202ENST00000359518 GTF3C6Q969F1 213 aa24.51■■□□□ 1.51
TRIM3-202ENST00000359518 CLSTN2Q9H4D0 955 aa24.51■■□□□ 1.51
TRIM3-202ENST00000359518 CYP21A2P08686 494 aa24.51■■□□□ 1.51
TRIM3-202ENST00000359518 USP16Q9Y5T5 823 aa24.51■■□□□ 1.51
TRIM3-202ENST00000359518 UTYO14607 1347 aa24.51■■□□□ 1.51
TRIM3-202ENST00000359518 TNNI3KQ59H18 835 aa24.51■■□□□ 1.51
TRIM3-202ENST00000359518 FPGT-TNNI3KV9GXZ4 949 aa24.51■■□□□ 1.51
TRIM3-202ENST00000359518 GTF2F1P35269 517 aaKnown RBP eCLIP24.5■■□□□ 1.51
TRIM3-202ENST00000359518 DDX19AQ9NUU7 478 aaKnown RBP24.5■■□□□ 1.51
TRIM3-202ENST00000359518 HMG20BQ9P0W2 317 aa24.5■■□□□ 1.51
TRIM3-202ENST00000359518 HEG1Q9ULI3 1381 aa24.5■■□□□ 1.51
TRIM3-202ENST00000359518 SPDYE4A6NLX3 237 aa24.5■■□□□ 1.51
TRIM3-202ENST00000359518 ZNF496Q96IT1 587 aaPredicted RBP24.5■■□□□ 1.51
TRIM3-202ENST00000359518 CCT2P78371 535 aaKnown RBP24.49■■□□□ 1.51
TRIM3-202ENST00000359518 GUCY1B3Q02153 619 aa24.49■■□□□ 1.51
TRIM3-202ENST00000359518 SNRKQ9NRH2 765 aa24.49■■□□□ 1.51
TRIM3-202ENST00000359518 NLRP2Q9NX02 1062 aa24.49■■□□□ 1.51
TRIM3-202ENST00000359518 TPM3P06753 285 aa24.49■■□□□ 1.51
TRIM3-202ENST00000359518 ERCC4Q92889 916 aaPredicted RBP24.49■■□□□ 1.51
TRIM3-202ENST00000359518 PTPN12Q05209 780 aaKnown RBP24.48■■□□□ 1.51
TRIM3-202ENST00000359518 ANKRD13DQ6ZTN6 518 aa24.48■■□□□ 1.51
TRIM3-202ENST00000359518 ZNF75DP51815 510 aa24.48■■□□□ 1.51
TRIM3-202ENST00000359518 SCRN1Q12765 414 aa24.48■■□□□ 1.51
TRIM3-202ENST00000359518 CHST3Q7LGC8 479 aa24.48■■□□□ 1.51
TRIM3-202ENST00000359518 A0A0G2JLW4 131 aa24.48■■□□□ 1.51
TRIM3-202ENST00000359518 RESTQ13127 1097 aa24.48■■□□□ 1.51
TRIM3-202ENST00000359518 NEUROD6Q96NK8 337 aa24.48■■□□□ 1.51
TRIM3-202ENST00000359518 ATP2B3Q16720 1220 aa24.47■■□□□ 1.51
TRIM3-202ENST00000359518 METTL22Q9BUU2 404 aaPredicted RBP24.47■■□□□ 1.51
TRIM3-202ENST00000359518 ATP5JP18859 108 aa24.46■■□□□ 1.51
TRIM3-202ENST00000359518 STOX1Q6ZVD7 989 aa24.46■■□□□ 1.51
TRIM3-202ENST00000359518 NCOA5Q9HCD5 579 aaKnown RBP24.46■■□□□ 1.51
TRIM3-202ENST00000359518 CLIP2Q9UDT6 1046 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms