RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 HAND2P61296 217 aa16.98■□□□□ 0.31
LMX1B-201ENST00000355497 ANKS4BQ8N8V4 417 aa16.98■□□□□ 0.31
LMX1B-201ENST00000355497 MPHOSPH6Q99547 160 aaKnown RBP16.98■□□□□ 0.31
LMX1B-201ENST00000355497 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
LMX1B-201ENST00000355497 LRPPRCP42704 1394 aaKnown RBP16.98■□□□□ 0.31
LMX1B-201ENST00000355497 BMP15O95972 392 aa16.98■□□□□ 0.31
LMX1B-201ENST00000355497 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
LMX1B-201ENST00000355497 GTF2A1P52655 376 aaPredicted RBP16.98■□□□□ 0.31
LMX1B-201ENST00000355497 PIP4K2BP78356 416 aa16.98■□□□□ 0.31
LMX1B-201ENST00000355497 RAB11FIP4Q86YS3 637 aa16.98■□□□□ 0.31
LMX1B-201ENST00000355497 BMP2KLQ5H9B9 411 aa16.97■□□□□ 0.31
LMX1B-201ENST00000355497 GIMAP6Q6P9H5 292 aa16.97■□□□□ 0.31
LMX1B-201ENST00000355497 TTC14Q96N46 770 aa16.97■□□□□ 0.31
LMX1B-201ENST00000355497 KRT13P13646 458 aa16.97■□□□□ 0.31
LMX1B-201ENST00000355497 CCDC129Q6ZRS4 1044 aa16.97■□□□□ 0.31
LMX1B-201ENST00000355497 APBB1IPQ7Z5R6 666 aaPredicted RBP16.97■□□□□ 0.31
LMX1B-201ENST00000355497 MAP3K2Q9Y2U5 619 aa16.97■□□□□ 0.31
LMX1B-201ENST00000355497 NBPF7P0C2Y1 421 aaPredicted RBP16.97■□□□□ 0.31
LMX1B-201ENST00000355497 SMC6Q96SB8 1091 aa16.97■□□□□ 0.31
LMX1B-201ENST00000355497 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
LMX1B-201ENST00000355497 CCDC160A6NGH7 325 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
LMX1B-201ENST00000355497 ARL1P40616 181 aaPredicted RBP16.96■□□□□ 0.31
LMX1B-201ENST00000355497 ANO6Q4KMQ2 910 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 ATRIPQ8WXE1 791 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 TACC1O75410 805 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 AFMP43652 599 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 SPAG1Q07617 926 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 MPRIPQ6WCQ1 1025 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 SKILP12757 684 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 FLIIQ13045 1269 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 RGS22Q8NE09 1264 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 DNAI1Q9UI46 699 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 SKAP1Q86WV1 359 aa16.96■□□□□ 0.31
LMX1B-201ENST00000355497 NAP1L3Q99457 506 aaPredicted RBP16.96■□□□□ 0.31
LMX1B-201ENST00000355497 CDC5LQ99459 802 aaKnown RBP16.96■□□□□ 0.31
LMX1B-201ENST00000355497 KCNG4Q8TDN1 519 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 ANAPC4Q9UJX5 808 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 ZNF354CQ86Y25 554 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 TTC16Q8NEE8 873 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 LMBR1Q8WVP7 490 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.95■□□□□ 0.3
LMX1B-201ENST00000355497 V9GYY5 206 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-201ENST00000355497 PRG4Q92954 1404 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-201ENST00000355497 C6orf229H3BNL8 230 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 ATP2A1O14983 1001 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 UTP14AQ9BVJ6 771 aaKnown RBP16.95■□□□□ 0.3
LMX1B-201ENST00000355497 CRNKL1Q9BZJ0 848 aaKnown RBP16.95■□□□□ 0.3
LMX1B-201ENST00000355497 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-201ENST00000355497 GSTO1P78417 241 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 WTAPQ15007 396 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 CCDC121Q6ZUS5 278 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 GSTA5Q7RTV2 222 aa16.95■□□□□ 0.3
LMX1B-201ENST00000355497 CTAGE9A4FU28 777 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 TRIM27P14373 513 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 CCDC63Q8NA47 563 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 SELENOSQ9BQE4 189 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 KRT23Q9C075 422 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 OTUD6BQ8N6M0 293 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 MRVI1Q9Y6F6 885 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 NOLC1Q14978 699 aaKnown RBP eCLIP16.94■□□□□ 0.3
LMX1B-201ENST00000355497 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
LMX1B-201ENST00000355497 SNRKQ9NRH2 765 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 KLF18A0A0U1RQI7 1052 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 NDC80O14777 642 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 PHACTR2O75167 634 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 GPTP24298 496 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 TUBB4AP04350 444 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 MCM6Q14566 821 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 GOLGA1Q92805 767 aa16.94■□□□□ 0.3
LMX1B-201ENST00000355497 PPFIA3O75145 1194 aa16.93■□□□□ 0.3
LMX1B-201ENST00000355497 LDHAL6AQ6ZMR3 332 aa16.93■□□□□ 0.3
LMX1B-201ENST00000355497 UQCRFS1P1P0C7P4 283 aa16.93■□□□□ 0.3
LMX1B-201ENST00000355497 SLC4A8Q2Y0W8 1093 aa16.93■□□□□ 0.3
LMX1B-201ENST00000355497 ZBTB3Q9H5J0 574 aa16.93■□□□□ 0.3
LMX1B-201ENST00000355497 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
LMX1B-201ENST00000355497 MRPS27Q92552 414 aaKnown RBP16.93■□□□□ 0.3
LMX1B-201ENST00000355497 POGZQ7Z3K3 1410 aa16.93■□□□□ 0.3
LMX1B-201ENST00000355497 KRT83P78385 493 aa16.93■□□□□ 0.3
LMX1B-201ENST00000355497 ZNF830Q96NB3 372 aaPredicted RBP16.93■□□□□ 0.3
LMX1B-201ENST00000355497 HECW1Q76N89 1606 aa16.93■□□□□ 0.3
LMX1B-201ENST00000355497 ZBTB16Q05516 673 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 ALG1Q9BT22 464 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
LMX1B-201ENST00000355497 CNPY2Q9Y2B0 182 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 TMX3Q96JJ7 454 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 PIK3R4Q99570 1358 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 PSMC4P43686 418 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 MAP7D1Q3KQU3 841 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 PSMA7O14818 248 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 NOL3O60936 208 aaKnown RBP16.92■□□□□ 0.3
LMX1B-201ENST00000355497 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
LMX1B-201ENST00000355497 ZBTB43O43298 467 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 SEPT6Q14141 434 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 AOPEPQ8N6M6 819 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 EFCAB5A4FU69 1503 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms