RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 WDR66Q8TBY9 1149 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 METAP2P50579 478 aaKnown RBP eCLIP14.51□□□□□ -0.099e-6■■■■□ 23.9
SYNCRIP-201ENST00000355238 TAF7Q15545 349 aaPredicted RBP14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 MACROD2A1Z1Q3 448 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 USP5P45974 858 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 SARNPP82979 210 aaKnown RBP14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 PRPHP41219 470 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 UBA7P41226 1012 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 DNAJC21Q5F1R6 531 aaKnown RBP14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 SYNJ2O15056 1496 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 PDE1AP54750 535 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 CATIPQ7Z7H3 387 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 SAMD15Q9P1V8 674 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 PUF60Q9UHX1 559 aaKnown RBP14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 CTNNA2P26232 953 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 LACTBP83111 547 aaPredicted RBP14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 MAP3K12Q12852 859 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 RRAGBQ5VZM2 374 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 NCOA7Q8NI08 942 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 ZNF569Q5MCW4 686 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 ANKRD24Q8TF21 1146 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 UBA5Q9GZZ9 404 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 SLC52A1Q9NWF4 448 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 MIS18AQ9NYP9 233 aa14.5□□□□□ -0.09
SYNCRIP-201ENST00000355238 RHOXF2BP0C7M4 288 aa14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 LMOD1P29536 600 aaPredicted RBP14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 RHOXF2Q9BQY4 288 aa14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 ATF3P18847 181 aa14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 FLIIQ13045 1269 aa14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 DDX46Q7L014 1031 aaKnown RBP14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 INPP5BP32019 993 aa14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 IFNKQ9P0W0 207 aa14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 IKBKGQ9Y6K9 419 aa14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 MINDY4BA8MYZ0 360 aa14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 AFAP1Q8N556 730 aa14.49□□□□□ -0.09
SYNCRIP-201ENST00000355238 MKRN1Q9UHC7 482 aaKnown RBP14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 RPRD2Q5VT52 1461 aaKnown RBP14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 TXNDC2Q86VQ3 553 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 CCDC82Q8N4S0 544 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 BRF1Q92994 677 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 IGHMBP2P38935 993 aaKnown RBP14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 CFAP58Q5T655 872 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 EXOC1Q9NV70 894 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 CCDC160A6NGH7 325 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 ANKRD44Q8N8A2 993 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 LMBR1Q8WVP7 490 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 TNIP1Q15025 636 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 KARSQ15046 597 aaKnown RBP14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 TMEM67Q5HYA8 995 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 CFAP57Q96MR6 1250 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 STIM2Q9P246 746 aa14.48□□□□□ -0.09
SYNCRIP-201ENST00000355238 SEPT6Q14141 434 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 DRC1Q96MC2 740 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 SMC6Q96SB8 1091 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 ATL3Q6DD88 541 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 SELENOSQ9BQE4 189 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 RALGAPBQ86X10 1494 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 ARHGAP25P42331 645 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 MXRA7P84157 204 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 LZTFL1Q9NQ48 299 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 PPFIBP2Q8ND30 876 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 PPP1R14CQ8TAE6 165 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 IFT74Q96LB3 600 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 DNAI2Q9GZS0 605 aa14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 RBM28Q9NW13 759 aaKnown RBP14.47□□□□□ -0.09
SYNCRIP-201ENST00000355238 SPTLC2O15270 562 aa14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 IDEP14735 1019 aa14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 TCERG1LQ5VWI1 586 aa14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 CNGA4Q8IV77 575 aa14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 PSMA7O14818 248 aa14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 SETDB1Q15047 1291 aa14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 ZGPATQ8N5A5 531 aaKnown RBP14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 UTP14AQ9BVJ6 771 aaKnown RBP14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 STXBP4Q6ZWJ1 553 aa14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 BAG1Q99933 345 aaPredicted RBP14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 RBM8AQ9Y5S9 174 aaKnown RBP14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 CLNS1AP54105 237 aaKnown RBP14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 SLC26A6Q9BXS9 759 aa14.46□□□□□ -0.09
SYNCRIP-201ENST00000355238 NDUFAB1O14561 156 aa14.46□□□□□ -0.1
SYNCRIP-201ENST00000355238 ZNF500O60304 480 aaPredicted RBP14.46□□□□□ -0.1
SYNCRIP-201ENST00000355238 LMNTD2Q8IXW0 634 aa14.46□□□□□ -0.1
SYNCRIP-201ENST00000355238 RHPN1Q8TCX5 695 aa14.46□□□□□ -0.1
SYNCRIP-201ENST00000355238 TSGA10Q9BZW7 698 aa14.46□□□□□ -0.1
SYNCRIP-201ENST00000355238 STRN4Q9NRL3 753 aa14.46□□□□□ -0.1
SYNCRIP-201ENST00000355238 ABCF2Q9UG63 623 aa14.46□□□□□ -0.1
SYNCRIP-201ENST00000355238 PPP1R42Q7Z4L9 355 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 RANBP6O60518 1105 aaKnown RBP14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 TTF1Q15361 905 aaPredicted RBP14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 ELF2Q15723 593 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 TSHZ3Q63HK5 1081 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 CCDC42Q96M95 316 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 SPAG5Q96R06 1193 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 MKNK2Q9HBH9 465 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 GUCA1BQ9UMX6 200 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 TNNC1P63316 161 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 MICU3Q86XE3 530 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 CAPZA3Q96KX2 299 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 MYD88Q99836 296 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 IQCGQ9H095 443 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms