RNA–Protein interactions for RNA: ENST00000350092.8

PTBP1-202, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-202ENST00000350092 CCDC186Q7Z3E2 898 aa18.83■□□□□ 0.61
PTBP1-202ENST00000350092 SPATA32Q96LK8 384 aa18.83■□□□□ 0.61
PTBP1-202ENST00000350092 NRBP1Q9UHY1 535 aa18.83■□□□□ 0.61
PTBP1-202ENST00000350092 CBX1P83916 185 aa18.83■□□□□ 0.6
PTBP1-202ENST00000350092 ZSCAN25Q6NSZ9 544 aa18.83■□□□□ 0.6
PTBP1-202ENST00000350092 ZNF589Q86UQ0 364 aaPredicted RBP18.83■□□□□ 0.6
PTBP1-202ENST00000350092 C9orf78Q9NZ63 289 aaPredicted RBP18.83■□□□□ 0.6
PTBP1-202ENST00000350092 TCEANC2Q96MN5 208 aa18.82■□□□□ 0.6
PTBP1-202ENST00000350092 NR1I2O75469 434 aa18.82■□□□□ 0.6
PTBP1-202ENST00000350092 CDC25BP30305 580 aa18.82■□□□□ 0.6
PTBP1-202ENST00000350092 NCBP1Q09161 790 aaKnown RBP18.82■□□□□ 0.6
PTBP1-202ENST00000350092 CHMP3Q9Y3E7 222 aa18.82■□□□□ 0.6
PTBP1-202ENST00000350092 BICC1Q9H694 974 aaKnown RBP18.82■□□□□ 0.6
PTBP1-202ENST00000350092 HMG20BQ9P0W2 317 aa18.82■□□□□ 0.6
PTBP1-202ENST00000350092 AFDNP55196 1824 aaKnown RBP18.81■□□□□ 0.6
PTBP1-202ENST00000350092 CCDC8Q9H0W5 538 aaPredicted RBP18.81■□□□□ 0.6
PTBP1-202ENST00000350092 TFIP11Q9UBB9 837 aaKnown RBP18.81■□□□□ 0.6
PTBP1-202ENST00000350092 SMTNL1A8MU46 457 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 GRM8O00222 908 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 RNMTO43148 476 aaKnown RBP18.8■□□□□ 0.6
PTBP1-202ENST00000350092 RNF20Q5VTR2 975 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 GTF3C6Q969F1 213 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 KCNJ4P48050 445 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 LINS1Q8NG48 757 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 GTPBP4Q9BZE4 634 aaKnown RBP18.8■□□□□ 0.6
PTBP1-202ENST00000350092 SCN11AQ9UI33 1791 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 FER1L4A9Z1Z3 1794 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 SLIT3O75094 1523 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 PRAMEF22A3QJZ6 481 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 TAF5LO75529 589 aa18.8■□□□□ 0.6
PTBP1-202ENST00000350092 RFX7Q2KHR2 1363 aa18.79■□□□□ 0.6
PTBP1-202ENST00000350092 TEFQ10587 303 aa18.79■□□□□ 0.6
PTBP1-202ENST00000350092 ZNF530Q6P9A1 599 aaPredicted RBP18.79■□□□□ 0.6
PTBP1-202ENST00000350092 HDAC5Q9UQL6 1122 aa18.79■□□□□ 0.6
PTBP1-202ENST00000350092 ABCC6O95255 1503 aa18.79■□□□□ 0.6
PTBP1-202ENST00000350092 CCDC144BQ3MJ40 725 aa18.79■□□□□ 0.6
PTBP1-202ENST00000350092 MPRIPQ6WCQ1 1025 aa18.79■□□□□ 0.6
PTBP1-202ENST00000350092 CCDC144CPQ8IYA2 1237 aa18.79■□□□□ 0.6
PTBP1-202ENST00000350092 FSD1Q9BTV5 496 aa18.79■□□□□ 0.6
PTBP1-202ENST00000350092 JAK2O60674 1132 aa18.78■□□□□ 0.6
PTBP1-202ENST00000350092 U2AF2P26368 475 aaKnown RBP eCLIP18.78■□□□□ 0.67e-8■■■□□ 17.9
PTBP1-202ENST00000350092 IQCB1Q15051 598 aa18.78■□□□□ 0.6
PTBP1-202ENST00000350092 SARM1Q6SZW1 724 aa18.78■□□□□ 0.6
PTBP1-202ENST00000350092 CACTINQ8WUQ7 758 aaKnown RBP18.78■□□□□ 0.6
PTBP1-202ENST00000350092 DNAJC25Q9H1X3 360 aa18.78■□□□□ 0.6
PTBP1-202ENST00000350092 BOLA2Q9H3K6 86 aa18.78■□□□□ 0.6
PTBP1-202ENST00000350092 PDIA6Q15084 440 aa18.77■□□□□ 0.6
PTBP1-202ENST00000350092 ARFGEF2Q9Y6D5 1785 aa18.77■□□□□ 0.6
PTBP1-202ENST00000350092 ZNF609O15014 1411 aa18.77■□□□□ 0.6
PTBP1-202ENST00000350092 G3BP1Q13283 466 aaKnown RBP eCLIP18.77■□□□□ 0.62e-9■□□□□ 9.4
PTBP1-202ENST00000350092 IGKV5-2P06315 115 aa18.77■□□□□ 0.59
PTBP1-202ENST00000350092 KCNA6P17658 529 aa18.77■□□□□ 0.59
PTBP1-202ENST00000350092 ADD1P35611 737 aaKnown RBP18.77■□□□□ 0.59
PTBP1-202ENST00000350092 CEBPAP49715 358 aaPredicted RBP18.77■□□□□ 0.59
PTBP1-202ENST00000350092 ZNF165P49910 485 aa18.76■□□□□ 0.59
PTBP1-202ENST00000350092 STK3Q13188 491 aa18.76■□□□□ 0.59
PTBP1-202ENST00000350092 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
PTBP1-202ENST00000350092 TRIM5Q9C035 493 aa18.76■□□□□ 0.59
PTBP1-202ENST00000350092 ZHX1Q9UKY1 873 aaPredicted RBP18.76■□□□□ 0.59
PTBP1-202ENST00000350092 DDX60Q8IY21 1712 aaKnown RBP18.76■□□□□ 0.59
PTBP1-202ENST00000350092 RGPD5Q99666 1765 aa18.76■□□□□ 0.59
PTBP1-202ENST00000350092 SMARCC2Q8TAQ2 1214 aa18.76■□□□□ 0.59
PTBP1-202ENST00000350092 BRF1Q92994 677 aa18.76■□□□□ 0.59
PTBP1-202ENST00000350092 C16orf45Q96MC5 204 aaPredicted RBP18.76■□□□□ 0.59
PTBP1-202ENST00000350092 CAVIN2O95810 425 aa18.75■□□□□ 0.59
PTBP1-202ENST00000350092 PLEKHO1Q53GL0 409 aaPredicted RBP18.75■□□□□ 0.59
PTBP1-202ENST00000350092 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
PTBP1-202ENST00000350092 SPDYE4A6NLX3 237 aa18.75■□□□□ 0.59
PTBP1-202ENST00000350092 CLIP2Q9UDT6 1046 aa18.75■□□□□ 0.59
PTBP1-202ENST00000350092 C11orf57Q6ZUT1 292 aaPredicted RBP18.75■□□□□ 0.59
PTBP1-202ENST00000350092 FEZ1Q99689 392 aa18.75■□□□□ 0.59
PTBP1-202ENST00000350092 GOLGA6L4A6NEF3 574 aa18.74■□□□□ 0.59
PTBP1-202ENST00000350092 KRT32Q14532 448 aa18.74■□□□□ 0.59
PTBP1-202ENST00000350092 TNNT1P13805 278 aa18.74■□□□□ 0.59
PTBP1-202ENST00000350092 RBM6P78332 1123 aaKnown RBP18.74■□□□□ 0.59
PTBP1-202ENST00000350092 AMOTQ4VCS5 1084 aa18.74■□□□□ 0.59
PTBP1-202ENST00000350092 EDC3Q96F86 508 aaKnown RBP18.74■□□□□ 0.59
PTBP1-202ENST00000350092 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
PTBP1-202ENST00000350092 BICD2Q8TD16 824 aa18.73■□□□□ 0.59
PTBP1-202ENST00000350092 MRFAP1L1Q96HT8 127 aa18.73■□□□□ 0.59
PTBP1-202ENST00000350092 ZSCAN16Q9H4T2 348 aaPredicted RBP18.73■□□□□ 0.59
PTBP1-202ENST00000350092 DDX21Q9NR30 783 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTBP1-202ENST00000350092 PAXBP1Q9Y5B6 917 aa18.73■□□□□ 0.59
PTBP1-202ENST00000350092 KLHDC4Q8TBB5 520 aa18.73■□□□□ 0.59
PTBP1-202ENST00000350092 PHF8Q9UPP1 1060 aa18.73■□□□□ 0.59
PTBP1-202ENST00000350092 TRPM3Q9HCF6 1732 aaPredicted RBP18.73■□□□□ 0.59
PTBP1-202ENST00000350092 ATP5JP18859 108 aa18.72■□□□□ 0.59
PTBP1-202ENST00000350092 EPHA10Q5JZY3 1008 aa18.72■□□□□ 0.59
PTBP1-202ENST00000350092 DRC7Q8IY82 874 aa18.72■□□□□ 0.59
PTBP1-202ENST00000350092 NEK1Q96PY6 1258 aa18.72■□□□□ 0.59
PTBP1-202ENST00000350092 SIL1Q9H173 461 aa18.72■□□□□ 0.59
PTBP1-202ENST00000350092 RFX5P48382 616 aaPredicted RBP18.72■□□□□ 0.59
PTBP1-202ENST00000350092 Q6ZUG5 572 aa18.72■□□□□ 0.59
PTBP1-202ENST00000350092 LRRC8AQ8IWT6 810 aa18.72■□□□□ 0.59
PTBP1-202ENST00000350092 GOLPH3LQ9H4A5 285 aa18.72■□□□□ 0.59
PTBP1-202ENST00000350092 SCRN1Q12765 414 aa18.72■□□□□ 0.59
PTBP1-202ENST00000350092 NYAP1Q6ZVC0 841 aa18.71■□□□□ 0.59
PTBP1-202ENST00000350092 DBNLQ9UJU6 430 aaKnown RBP18.71■□□□□ 0.59
PTBP1-202ENST00000350092 GLI3P10071 1580 aa18.71■□□□□ 0.59
PTBP1-202ENST00000350092 NEURL1BA8MQ27 555 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms