RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 ERC2O15083 957 aa22.59■■□□□ 1.21
SNCG-201ENST00000348795 SMARCA5O60264 1052 aaPredicted RBP22.59■■□□□ 1.21
SNCG-201ENST00000348795 IFIT2P09913 472 aaKnown RBP22.59■■□□□ 1.21
SNCG-201ENST00000348795 PDE1AP54750 535 aa22.59■■□□□ 1.21
SNCG-201ENST00000348795 SKAP1Q86WV1 359 aa22.59■■□□□ 1.21
SNCG-201ENST00000348795 PA2G4Q9UQ80 394 aaKnown RBP22.59■■□□□ 1.21
SNCG-201ENST00000348795 COL24A1Q17RW2 1714 aa22.58■■□□□ 1.21
SNCG-201ENST00000348795 PHF14O94880 888 aa22.58■■□□□ 1.21
SNCG-201ENST00000348795 TTC22Q5TAA0 569 aa22.58■■□□□ 1.21
SNCG-201ENST00000348795 TBC1D9BQ66K14 1250 aa22.58■■□□□ 1.21
SNCG-201ENST00000348795 NBPF5PQ86XG9 351 aaPredicted RBP22.58■■□□□ 1.21
SNCG-201ENST00000348795 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
SNCG-201ENST00000348795 NLGN1Q8N2Q7 840 aa22.57■■□□□ 1.2
SNCG-201ENST00000348795 SRP68Q9UHB9 627 aaKnown RBP22.57■■□□□ 1.2
SNCG-201ENST00000348795 AKAP2Q9Y2D5 859 aa22.57■■□□□ 1.2
SNCG-201ENST00000348795 SALL3Q9BXA9 1300 aa22.57■■□□□ 1.2
SNCG-201ENST00000348795 SASH1O94885 1247 aa22.56■■□□□ 1.2
SNCG-201ENST00000348795 SF3B3Q15393 1217 aaKnown RBP22.56■■□□□ 1.2
SNCG-201ENST00000348795 SIL1Q9H173 461 aa22.56■■□□□ 1.2
SNCG-201ENST00000348795 IL1RAPL2Q9NP60 686 aa22.56■■□□□ 1.2
SNCG-201ENST00000348795 TSHZ2Q9NRE2 1034 aa22.56■■□□□ 1.2
SNCG-201ENST00000348795 ITGA6P23229 1130 aa22.55■■□□□ 1.2
SNCG-201ENST00000348795 CASC1Q6TDU7 716 aa22.55■■□□□ 1.2
SNCG-201ENST00000348795 C16orf71Q8IYS4 520 aaPredicted RBP22.55■■□□□ 1.2
SNCG-201ENST00000348795 NLRP3Q96P20 1036 aa22.55■■□□□ 1.2
SNCG-201ENST00000348795 CAMKK2Q96RR4 588 aa22.55■■□□□ 1.2
SNCG-201ENST00000348795 CDC5LQ99459 802 aaKnown RBP22.55■■□□□ 1.2
SNCG-201ENST00000348795 CEP126Q9P2H0 1117 aa22.55■■□□□ 1.2
SNCG-201ENST00000348795 RIC1Q4ADV7 1423 aa22.55■■□□□ 1.2
SNCG-201ENST00000348795 NPHP1O15259 732 aa22.54■■□□□ 1.2
SNCG-201ENST00000348795 GLRX3O76003 335 aaKnown RBP22.53■■□□□ 1.2
SNCG-201ENST00000348795 GYS1P13807 737 aa22.53■■□□□ 1.2
SNCG-201ENST00000348795 C8orf34Q49A92 452 aa22.53■■□□□ 1.2
SNCG-201ENST00000348795 LDHAL6AQ6ZMR3 332 aa22.53■■□□□ 1.2
SNCG-201ENST00000348795 BICDL1Q6ZP65 573 aa22.53■■□□□ 1.2
SNCG-201ENST00000348795 UPF2Q9HAU5 1272 aaKnown RBP22.53■■□□□ 1.2
SNCG-201ENST00000348795 ECHDC1Q9NTX5 307 aa22.53■■□□□ 1.2
SNCG-201ENST00000348795 STK32BQ9NY57 414 aa22.53■■□□□ 1.2
SNCG-201ENST00000348795 DDX60Q8IY21 1712 aaKnown RBP22.52■■□□□ 1.2
SNCG-201ENST00000348795 FAM177BA6PVY3 158 aa22.52■■□□□ 1.2
SNCG-201ENST00000348795 AACSQ86V21 672 aa22.52■■□□□ 1.2
SNCG-201ENST00000348795 GREM2Q9H772 168 aa22.52■■□□□ 1.2
SNCG-201ENST00000348795 MROH5Q6ZUA9 1318 aa22.52■■□□□ 1.2
SNCG-201ENST00000348795 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
SNCG-201ENST00000348795 IGHMBP2P38935 993 aaKnown RBP22.51■■□□□ 1.19
SNCG-201ENST00000348795 NFIXQ14938 502 aa22.51■■□□□ 1.19
SNCG-201ENST00000348795 ERFEQ4G0M1 354 aa22.51■■□□□ 1.19
SNCG-201ENST00000348795 TNNI3KQ59H18 835 aa22.51■■□□□ 1.19
SNCG-201ENST00000348795 ATG9AQ7Z3C6 839 aa22.51■■□□□ 1.19
SNCG-201ENST00000348795 SYNE4Q8N205 404 aa22.51■■□□□ 1.19
SNCG-201ENST00000348795 KLHDC4Q8TBB5 520 aa22.51■■□□□ 1.19
SNCG-201ENST00000348795 CNNM1Q9NRU3 951 aa22.51■■□□□ 1.19
SNCG-201ENST00000348795 FPGT-TNNI3KV9GXZ4 949 aa22.51■■□□□ 1.19
SNCG-201ENST00000348795 CDC45O75419 566 aa22.5■■□□□ 1.19
SNCG-201ENST00000348795 TM4SF1P30408 202 aa22.5■■□□□ 1.19
SNCG-201ENST00000348795 ST5P78524 1137 aa22.5■■□□□ 1.19
SNCG-201ENST00000348795 AMIGO3Q86WK7 504 aa22.5■■□□□ 1.19
SNCG-201ENST00000348795 CNBD1Q8NA66 436 aa22.5■■□□□ 1.19
SNCG-201ENST00000348795 MPHOSPH8Q99549 860 aa22.5■■□□□ 1.19
SNCG-201ENST00000348795 QSER1Q2KHR3 1735 aa22.5■■□□□ 1.19
SNCG-201ENST00000348795 TFCP2Q12800 502 aa22.49■■□□□ 1.19
SNCG-201ENST00000348795 TICAM2Q86XR7 235 aa22.49■■□□□ 1.19
SNCG-201ENST00000348795 NUTM1Q86Y26 1132 aa22.49■■□□□ 1.19
SNCG-201ENST00000348795 EP400Q96L91 3159 aa22.48■■□□□ 1.19
SNCG-201ENST00000348795 EN1Q05925 392 aaPredicted RBP22.48■■□□□ 1.19
SNCG-201ENST00000348795 SLC15A2Q16348 729 aa22.48■■□□□ 1.19
SNCG-201ENST00000348795 ZNF827Q17R98 1081 aa22.48■■□□□ 1.19
SNCG-201ENST00000348795 OTUD7AQ8TE49 926 aaPredicted RBP22.48■■□□□ 1.19
SNCG-201ENST00000348795 EAF2Q96CJ1 260 aaPredicted RBP22.48■■□□□ 1.19
SNCG-201ENST00000348795 EZH2Q15910 746 aaKnown RBP22.47■■□□□ 1.19
SNCG-201ENST00000348795 BCL11AQ9H165 835 aa22.47■■□□□ 1.19
SNCG-201ENST00000348795 RIPOR2Q9Y4F9 1068 aa22.47■■□□□ 1.19
SNCG-201ENST00000348795 MSH5O43196 834 aa22.46■■□□□ 1.19
SNCG-201ENST00000348795 SERPINB2P05120 415 aa22.46■■□□□ 1.19
SNCG-201ENST00000348795 COL23A1Q86Y22 540 aaPredicted RBP22.46■■□□□ 1.19
SNCG-201ENST00000348795 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
SNCG-201ENST00000348795 CNTROBQ8N137 903 aa22.46■■□□□ 1.19
SNCG-201ENST00000348795 ZNF594Q96JF6 807 aaPredicted RBP22.46■■□□□ 1.19
SNCG-201ENST00000348795 GSPT1P15170 499 aaKnown RBP22.45■■□□□ 1.18
SNCG-201ENST00000348795 LRRC24Q50LG9 513 aa22.45■■□□□ 1.18
SNCG-201ENST00000348795 METTL24Q5JXM2 366 aa22.45■■□□□ 1.18
SNCG-201ENST00000348795 SMIM5Q71RC9 77 aa22.45■■□□□ 1.18
SNCG-201ENST00000348795 LRP5O75197 1615 aa22.44■■□□□ 1.18
SNCG-201ENST00000348795 SDSP20132 328 aa22.44■■□□□ 1.18
SNCG-201ENST00000348795 DDX46Q7L014 1031 aaKnown RBP22.44■■□□□ 1.18
SNCG-201ENST00000348795 PI4K2BQ8TCG2 481 aa22.44■■□□□ 1.18
SNCG-201ENST00000348795 ABCC12Q96J65 1359 aa22.44■■□□□ 1.18
SNCG-201ENST00000348795 CCDC85AQ96PX6 553 aaPredicted RBP22.44■■□□□ 1.18
SNCG-201ENST00000348795 RBM19Q9Y4C8 960 aaKnown RBP22.44■■□□□ 1.18
SNCG-201ENST00000348795 TRIM6-TRIM34B2RNG4 842 aa22.43■■□□□ 1.18
SNCG-201ENST00000348795 PDE8BO95263 885 aa22.43■■□□□ 1.18
SNCG-201ENST00000348795 ATP5JP18859 108 aa22.43■■□□□ 1.18
SNCG-201ENST00000348795 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.43■■□□□ 1.18
SNCG-201ENST00000348795 CCDC8Q9H0W5 538 aaPredicted RBP22.43■■□□□ 1.18
SNCG-201ENST00000348795 BSDC1Q9NW68 430 aaPredicted RBP22.43■■□□□ 1.18
SNCG-201ENST00000348795 PNPLA7Q6ZV29 1317 aa22.42■■□□□ 1.18
SNCG-201ENST00000348795 HIP1O00291 1037 aa22.42■■□□□ 1.18
SNCG-201ENST00000348795 CCDC158Q5M9N0 1113 aa22.42■■□□□ 1.18
SNCG-201ENST00000348795 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
SNCG-201ENST00000348795 ZNF609O15014 1411 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms