RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 ZNF428Q96B54 188 aa18.98■□□□□ 0.63
MBD1-204ENST00000347968 PGBD1Q96JS3 809 aa18.98■□□□□ 0.63
MBD1-204ENST00000347968 PLEKHG2Q9H7P9 1386 aa18.98■□□□□ 0.63
MBD1-204ENST00000347968 MCM6Q14566 821 aa18.98■□□□□ 0.63
MBD1-204ENST00000347968 JAKMIP1Q96N16 626 aaKnown RBP18.98■□□□□ 0.63
MBD1-204ENST00000347968 NUTM2FA1L443 756 aa18.97■□□□□ 0.63
MBD1-204ENST00000347968 STK3Q13188 491 aa18.97■□□□□ 0.63
MBD1-204ENST00000347968 LEKR1Q6ZMV7 388 aa18.97■□□□□ 0.63
MBD1-204ENST00000347968 AOPEPQ8N6M6 819 aa18.97■□□□□ 0.63
MBD1-204ENST00000347968 N4BP1O75113 896 aaKnown RBP18.97■□□□□ 0.63
MBD1-204ENST00000347968 ME3Q16798 604 aa18.97■□□□□ 0.63
MBD1-204ENST00000347968 TMC6Q7Z403 805 aa18.97■□□□□ 0.63
MBD1-204ENST00000347968 NFE2L2Q16236 605 aa18.97■□□□□ 0.63
MBD1-204ENST00000347968 SMC2O95347 1197 aa18.96■□□□□ 0.63
MBD1-204ENST00000347968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.96■□□□□ 0.63
MBD1-204ENST00000347968 PNMA6EA0A0J9YXQ4 647 aa18.96■□□□□ 0.63
MBD1-204ENST00000347968 WWC2Q6AWC2 1192 aa18.96■□□□□ 0.63
MBD1-204ENST00000347968 OSBPL3Q9H4L5 887 aa18.96■□□□□ 0.63
MBD1-204ENST00000347968 HYPKQ9NX55 129 aa18.96■□□□□ 0.63
MBD1-204ENST00000347968 CEP83Q9Y592 693 aa18.96■□□□□ 0.63
MBD1-204ENST00000347968 FYB1O15117 783 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 TADA3O75528 432 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 LEO1Q8WVC0 666 aaPredicted RBP18.95■□□□□ 0.62
MBD1-204ENST00000347968 LRRCC1Q9C099 1032 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 HMMRO75330 724 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 CCDC172P0C7W6 258 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 MAGEA9P43362 315 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 NOM1Q5C9Z4 860 aaKnown RBP18.95■□□□□ 0.62
MBD1-204ENST00000347968 NBPF6Q5VWK0 638 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 ARMCX5Q6P1M9 558 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 NBPF4Q96M43 638 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 CXorf56Q9H5V9 222 aa18.95■□□□□ 0.62
MBD1-204ENST00000347968 MRFAP1L1Q96HT8 127 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 FTOQ9C0B1 505 aaKnown RBP eCLIP18.94■□□□□ 0.62
MBD1-204ENST00000347968 BRMS1Q9HCU9 246 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 AATKQ6ZMQ8 1374 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 NEMFO60524 1076 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 PPFIA3O75145 1194 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 UBXN6Q9BZV1 441 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 DDX19AQ9NUU7 478 aaKnown RBP18.94■□□□□ 0.62
MBD1-204ENST00000347968 SUGCTQ9HAC7 445 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 PDE11AQ9HCR9 933 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 TMEM2Q9UHN6 1383 aa18.94■□□□□ 0.62
MBD1-204ENST00000347968 CDC25BP30305 580 aa18.93■□□□□ 0.62
MBD1-204ENST00000347968 PRPF40BQ6NWY9 871 aaKnown RBP18.93■□□□□ 0.62
MBD1-204ENST00000347968 NBPF11Q86T75 865 aa18.93■□□□□ 0.62
MBD1-204ENST00000347968 LARP1Q6PKG0 1096 aaKnown RBP18.93■□□□□ 0.62
MBD1-204ENST00000347968 G2E3Q7L622 706 aa18.93■□□□□ 0.62
MBD1-204ENST00000347968 FCHSD2O94868 740 aa18.92■□□□□ 0.62
MBD1-204ENST00000347968 ARFGAP3Q9NP61 516 aa18.92■□□□□ 0.62
MBD1-204ENST00000347968 FUT8Q9BYC5 575 aa18.92■□□□□ 0.62
MBD1-204ENST00000347968 PARD6BQ9BYG5 372 aa18.92■□□□□ 0.62
MBD1-204ENST00000347968 FAM135BQ49AJ0 1406 aa18.91■□□□□ 0.62
MBD1-204ENST00000347968 SLC4A2P04920 1241 aa18.91■□□□□ 0.62
MBD1-204ENST00000347968 DHX40Q8IX18 779 aaKnown RBP18.91■□□□□ 0.62
MBD1-204ENST00000347968 EXOC4Q96A65 974 aa18.91■□□□□ 0.62
MBD1-204ENST00000347968 TPCN1Q9ULQ1 816 aa18.91■□□□□ 0.62
MBD1-204ENST00000347968 NRXN3Q9Y4C0 1643 aa18.91■□□□□ 0.62
MBD1-204ENST00000347968 ELP1O95163 1332 aa18.91■□□□□ 0.62
MBD1-204ENST00000347968 ETF1P62495 437 aaKnown RBP18.91■□□□□ 0.62
MBD1-204ENST00000347968 MICALL1Q8N3F8 863 aa18.91■□□□□ 0.62
MBD1-204ENST00000347968 IFNKQ9P0W0 207 aa18.91■□□□□ 0.62
MBD1-204ENST00000347968 KIF2AO00139 706 aaPredicted RBP18.9■□□□□ 0.62
MBD1-204ENST00000347968 SFPQP23246 707 aaKnown RBP eCLIP18.9■□□□□ 0.62
MBD1-204ENST00000347968 PLEKHO1Q53GL0 409 aaPredicted RBP18.9■□□□□ 0.62
MBD1-204ENST00000347968 XPO4Q9C0E2 1151 aaKnown RBP18.9■□□□□ 0.62
MBD1-204ENST00000347968 SUFUQ9UMX1 484 aa18.9■□□□□ 0.62
MBD1-204ENST00000347968 FAN1Q9Y2M0 1017 aa18.9■□□□□ 0.62
MBD1-204ENST00000347968 PTH1RQ03431 593 aa18.9■□□□□ 0.62
MBD1-204ENST00000347968 CCDC30Q5VVM6 783 aa18.9■□□□□ 0.62
MBD1-204ENST00000347968 NECTIN2Q92692 538 aa18.9■□□□□ 0.62
MBD1-204ENST00000347968 RABEP2Q9H5N1 569 aa18.9■□□□□ 0.62
MBD1-204ENST00000347968 TERF2IPQ9NYB0 399 aa18.9■□□□□ 0.62
MBD1-204ENST00000347968 NPHP3Q7Z494 1330 aa18.9■□□□□ 0.62
MBD1-204ENST00000347968 IBSPP21815 317 aaPredicted RBP18.89■□□□□ 0.62
MBD1-204ENST00000347968 SALL3Q9BXA9 1300 aa18.89■□□□□ 0.61
MBD1-204ENST00000347968 LSG1Q9H089 658 aaKnown RBP18.89■□□□□ 0.61
MBD1-204ENST00000347968 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
MBD1-204ENST00000347968 ZNF853P0CG23 659 aa18.89■□□□□ 0.61
MBD1-204ENST00000347968 HDGFP51858 240 aaKnown RBP18.89■□□□□ 0.61
MBD1-204ENST00000347968 LONRF2Q1L5Z9 754 aa18.89■□□□□ 0.61
MBD1-204ENST00000347968 SARM1Q6SZW1 724 aa18.89■□□□□ 0.61
MBD1-204ENST00000347968 LRRC7Q96NW7 1537 aa18.89■□□□□ 0.61
MBD1-204ENST00000347968 TTC21AQ8NDW8 1320 aa18.88■□□□□ 0.61
MBD1-204ENST00000347968 BIN1O00499 593 aa18.88■□□□□ 0.61
MBD1-204ENST00000347968 SGSM2O43147 1006 aa18.88■□□□□ 0.61
MBD1-204ENST00000347968 HDGFL2Q7Z4V5 671 aaPredicted RBP18.88■□□□□ 0.61
MBD1-204ENST00000347968 CCDC158Q5M9N0 1113 aa18.87■□□□□ 0.61
MBD1-204ENST00000347968 RBM43Q6ZSC3 357 aaKnown RBP18.87■□□□□ 0.61
MBD1-204ENST00000347968 PUS7Q96PZ0 661 aaKnown RBP18.87■□□□□ 0.61
MBD1-204ENST00000347968 PARP3Q9Y6F1 533 aa18.87■□□□□ 0.61
MBD1-204ENST00000347968 CD163L1Q9NR16 1453 aa18.87■□□□□ 0.61
MBD1-204ENST00000347968 SETD1AO15047 1707 aaKnown RBP18.87■□□□□ 0.61
MBD1-204ENST00000347968 TTC21BQ7Z4L5 1316 aa18.87■□□□□ 0.61
MBD1-204ENST00000347968 ZNF622Q969S3 477 aaKnown RBP eCLIP18.87■□□□□ 0.615e-7■■■□□ 14.6
MBD1-204ENST00000347968 EMILIN1Q9Y6C2 1016 aa18.87■□□□□ 0.61
MBD1-204ENST00000347968 UBR1Q8IWV7 1749 aa18.87■□□□□ 0.61
MBD1-204ENST00000347968 STX1AQ16623 288 aa18.87■□□□□ 0.61
MBD1-204ENST00000347968 AXDND1Q5T1B0 1012 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms