RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CASQ1P31415 396 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 CCDC12Q8WUD4 166 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 TRIM35Q9UPQ4 493 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 ZBTB43O43298 467 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 KIAA0754O94854 1291 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 MRPS27Q92552 414 aaKnown RBP19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 TSG101Q99816 390 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 ZKSCAN5Q9Y2L8 839 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 TRPM2O94759 1503 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 SYKP43405 635 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 DNM1Q05193 864 aaKnown RBP19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 MAP9Q49MG5 647 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 SLC26A6Q9BXS9 759 aa19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 PA2G4Q9UQ80 394 aaKnown RBP19.72■□□□□ 0.75
TRAPPC11-201ENST00000334690 YEATS4O95619 227 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 BMP15O95972 392 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 IL13P35225 146 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 AK2P54819 239 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 PDE4BQ07343 736 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 NMIQ13287 307 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 TCP11L1Q9NUJ3 509 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 PAXBP1Q9Y5B6 917 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 SAMD9Q5K651 1589 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 PRIM1P49642 420 aaKnown RBP19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 EDC4Q6P2E9 1401 aaKnown RBP19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 KRT23Q9C075 422 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 CHL1O00533 1208 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 MCM3P25205 808 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 CACNA2D4Q7Z3S7 1137 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 ZGPATQ8N5A5 531 aaKnown RBP19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 CNNM2Q9H8M5 875 aa19.71■□□□□ 0.75
TRAPPC11-201ENST00000334690 UBA7P41226 1012 aa19.7■□□□□ 0.74
TRAPPC11-201ENST00000334690 Q6ZUG5 572 aa19.7■□□□□ 0.74
TRAPPC11-201ENST00000334690 LRRC2Q9BYS8 371 aa19.7■□□□□ 0.74
TRAPPC11-201ENST00000334690 PTPRTO14522 1441 aa19.7■□□□□ 0.74
TRAPPC11-201ENST00000334690 SNW1Q13573 536 aaKnown RBP19.7■□□□□ 0.74
TRAPPC11-201ENST00000334690 JAKMIP3Q5VZ66 844 aa19.7■□□□□ 0.74
TRAPPC11-201ENST00000334690 CRACR2BQ8N4Y2 399 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC11-201ENST00000334690 TBX22Q9Y458 520 aa19.7■□□□□ 0.74
TRAPPC11-201ENST00000334690 HOXB7P09629 217 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 WTAPQ15007 396 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 CCDC144CPQ8IYA2 1237 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 NUP88Q99567 741 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 DMRT2Q9Y5R5 561 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 TSPY2A6NKD2 308 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 USO1O60763 962 aaKnown RBP19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 ANO6Q4KMQ2 910 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 ALG1Q9BT22 464 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 CCDC171Q6TFL3 1326 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 CREB3L3Q68CJ9 461 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 VPS36Q86VN1 386 aa19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 DDX21Q9NR30 783 aaKnown RBP eCLIP19.69■□□□□ 0.74
TRAPPC11-201ENST00000334690 BAG3O95817 575 aa19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 AMPD3Q01432 767 aa19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 PAG1Q9NWQ8 432 aa19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 PPFIA3O75145 1194 aa19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 SPTY2D1Q68D10 685 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 CPLX3Q8WVH0 158 aa19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 MPHOSPH10O00566 681 aaKnown RBP19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 NBPF7P0C2Y1 421 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 NOLC1Q14978 699 aaKnown RBP eCLIP19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 CWF19L2Q2TBE0 894 aaKnown RBP19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 CCDC152Q4G0S7 254 aa19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 IP6K1Q92551 441 aa19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 MSH6P52701 1360 aa19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 HOXC9P31274 260 aa19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 SEPT11Q9NVA2 429 aaKnown RBP19.68■□□□□ 0.74
TRAPPC11-201ENST00000334690 GCP02774 474 aa19.67■□□□□ 0.74
TRAPPC11-201ENST00000334690 RAB11FIP4Q86YS3 637 aa19.67■□□□□ 0.74
TRAPPC11-201ENST00000334690 ESR2Q92731 530 aa19.67■□□□□ 0.74
TRAPPC11-201ENST00000334690 LRRC59Q96AG4 307 aaKnown RBP19.67■□□□□ 0.74
TRAPPC11-201ENST00000334690 CENPHQ9H3R5 247 aa19.67■□□□□ 0.74
TRAPPC11-201ENST00000334690 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
TRAPPC11-201ENST00000334690 PAFAH1B1P43034 410 aa19.67■□□□□ 0.74
TRAPPC11-201ENST00000334690 FAM193AP78312 1265 aa19.66■□□□□ 0.74
TRAPPC11-201ENST00000334690 WWC2Q6AWC2 1192 aa19.66■□□□□ 0.74
TRAPPC11-201ENST00000334690 CCDC186Q7Z3E2 898 aa19.66■□□□□ 0.74
TRAPPC11-201ENST00000334690 ADAMTS2O95450 1211 aa19.66■□□□□ 0.74
TRAPPC11-201ENST00000334690 SLC9C2Q5TAH2 1124 aa19.66■□□□□ 0.74
TRAPPC11-201ENST00000334690 NFATC2IPQ8NCF5 419 aa19.66■□□□□ 0.74
TRAPPC11-201ENST00000334690 KAT14Q9H8E8 782 aa19.66■□□□□ 0.74
TRAPPC11-201ENST00000334690 G2E3Q7L622 706 aa19.66■□□□□ 0.74
TRAPPC11-201ENST00000334690 DCAF5Q96JK2 942 aa19.66■□□□□ 0.74
TRAPPC11-201ENST00000334690 CEP135Q66GS9 1140 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 DHX32Q7L7V1 743 aaKnown RBP19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 CALML4Q96GE6 196 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 CBX1P83916 185 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 RUFY3Q7L099 469 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 CRNKL1Q9BZJ0 848 aaKnown RBP19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 SBNO2Q9Y2G9 1366 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 AOX1Q06278 1338 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 POTEB2H3BUK9 544 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 SYT1P21579 422 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 MTIF2P46199 727 aaKnown RBP19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 PKNOX2Q96KN3 472 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 ATP7AQ04656 1500 aa19.65■□□□□ 0.74
TRAPPC11-201ENST00000334690 SKILP12757 684 aa19.64■□□□□ 0.74
TRAPPC11-201ENST00000334690 PIP4K2BP78356 416 aa19.64■□□□□ 0.74
TRAPPC11-201ENST00000334690 CCDC96Q2M329 555 aa19.64■□□□□ 0.74
TRAPPC11-201ENST00000334690 RPGRQ92834 1020 aaKnown RBP19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms