RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 HYPKQ9NX55 129 aa14□□□□□ -0.17
APOBEC3B-201ENST00000333467 COL4A1P02462 1669 aa13.99□□□□□ -0.17
APOBEC3B-201ENST00000333467 COL4A5P29400 1685 aa13.99□□□□□ -0.17
APOBEC3B-201ENST00000333467 PLIN1O60240 522 aa13.99□□□□□ -0.17
APOBEC3B-201ENST00000333467 TOMM70O94826 608 aa13.99□□□□□ -0.17
APOBEC3B-201ENST00000333467 TCIRG1Q13488 830 aa13.99□□□□□ -0.17
APOBEC3B-201ENST00000333467 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
APOBEC3B-201ENST00000333467 C8orf58Q8NAV2 365 aa13.99□□□□□ -0.17
APOBEC3B-201ENST00000333467 ZNF428Q96B54 188 aa13.99□□□□□ -0.17
APOBEC3B-201ENST00000333467 GLTPD2A6NH11 291 aa13.98□□□□□ -0.17
APOBEC3B-201ENST00000333467 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
APOBEC3B-201ENST00000333467 HOXA10P31260 410 aaPredicted RBP13.98□□□□□ -0.17
APOBEC3B-201ENST00000333467 FKBP4Q02790 459 aaKnown RBP eCLIP13.98□□□□□ -0.17
APOBEC3B-201ENST00000333467 SLC51AQ86UW1 340 aa13.98□□□□□ -0.17
APOBEC3B-201ENST00000333467 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
APOBEC3B-201ENST00000333467 RRAGCQ9HB90 399 aa13.98□□□□□ -0.17
APOBEC3B-201ENST00000333467 LTBP1Q14766 1721 aa13.98□□□□□ -0.17
APOBEC3B-201ENST00000333467 SH3TC1Q8TE82 1336 aa13.97□□□□□ -0.17
APOBEC3B-201ENST00000333467 HSPA6P17066 643 aa13.97□□□□□ -0.17
APOBEC3B-201ENST00000333467 ANKRD13DQ6ZTN6 518 aa13.97□□□□□ -0.17
APOBEC3B-201ENST00000333467 C16orf71Q8IYS4 520 aaPredicted RBP13.97□□□□□ -0.17
APOBEC3B-201ENST00000333467 TSPYL6Q8N831 410 aa13.97□□□□□ -0.17
APOBEC3B-201ENST00000333467 NLRP3Q96P20 1036 aa13.97□□□□□ -0.17
APOBEC3B-201ENST00000333467 PHAXQ9H814 394 aaKnown RBP13.97□□□□□ -0.17
APOBEC3B-201ENST00000333467 DUOX1Q9NRD9 1551 aa13.97□□□□□ -0.17
APOBEC3B-201ENST00000333467 ABCC4O15439 1325 aa13.97□□□□□ -0.17
APOBEC3B-201ENST00000333467 PPEF1O14829 653 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3B-201ENST00000333467 SYNE4Q8N205 404 aa13.96□□□□□ -0.17
APOBEC3B-201ENST00000333467 RBM17Q96I25 401 aaKnown RBP13.96□□□□□ -0.17
APOBEC3B-201ENST00000333467 ZNF277Q9NRM2 450 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3B-201ENST00000333467 TRMT112Q9UI30 125 aaKnown RBP13.96□□□□□ -0.17
APOBEC3B-201ENST00000333467 ATP5J2-PTCD1G3V325 749 aa13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 CT47B1P0C2W7 299 aaPredicted RBP13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 HCLS1P14317 486 aaPredicted RBP13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 RTKN2Q8IZC4 609 aa13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 RBM46Q8TBY0 533 aaKnown RBP13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 CRAMP1Q96RY5 1269 aa13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 ISCA1Q9BUE6 129 aa13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 IL16Q14005 1332 aa13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 CCDC30Q5VVM6 783 aa13.95□□□□□ -0.18
APOBEC3B-201ENST00000333467 ADAMTSL1Q8N6G6 1762 aa13.94□□□□□ -0.18
APOBEC3B-201ENST00000333467 IARSP41252 1262 aaKnown RBP13.94□□□□□ -0.18
APOBEC3B-201ENST00000333467 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
APOBEC3B-201ENST00000333467 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
APOBEC3B-201ENST00000333467 RIC3Q7Z5B4 369 aa13.94□□□□□ -0.18
APOBEC3B-201ENST00000333467 PSMD1Q99460 953 aa13.94□□□□□ -0.18
APOBEC3B-201ENST00000333467 ZNF541Q9H0D2 1346 aa13.93□□□□□ -0.18
APOBEC3B-201ENST00000333467 TWISTNBQ3B726 338 aaPredicted RBP13.93□□□□□ -0.18
APOBEC3B-201ENST00000333467 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
APOBEC3B-201ENST00000333467 C20orf194Q5TEA3 1177 aa13.93□□□□□ -0.18
APOBEC3B-201ENST00000333467 CC2D2BQ6DHV5 1058 aa13.93□□□□□ -0.18
APOBEC3B-201ENST00000333467 FAM89AQ96GI7 184 aa13.93□□□□□ -0.18
APOBEC3B-201ENST00000333467 DDNO94850 711 aaPredicted RBP13.92□□□□□ -0.18
APOBEC3B-201ENST00000333467 VEGFAP15692 232 aaPredicted RBP13.92□□□□□ -0.18
APOBEC3B-201ENST00000333467 MYD88Q99836 296 aa13.92□□□□□ -0.18
APOBEC3B-201ENST00000333467 POTECB2RU33 542 aa13.91□□□□□ -0.18
APOBEC3B-201ENST00000333467 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
APOBEC3B-201ENST00000333467 CHMP4AQ9BY43 222 aa13.91□□□□□ -0.18
APOBEC3B-201ENST00000333467 A0A1B0GUL6 1792 aa13.91□□□□□ -0.18
APOBEC3B-201ENST00000333467 DDX58O95786 925 aaKnown RBP13.9□□□□□ -0.18
APOBEC3B-201ENST00000333467 FSTL1Q12841 308 aa13.9□□□□□ -0.18
APOBEC3B-201ENST00000333467 GRAPQ13588 217 aa13.9□□□□□ -0.18
APOBEC3B-201ENST00000333467 DDX46Q7L014 1031 aaKnown RBP13.9□□□□□ -0.18
APOBEC3B-201ENST00000333467 GRAPLQ8TC17 118 aaPredicted RBP13.9□□□□□ -0.18
APOBEC3B-201ENST00000333467 MYH16Q9H6N6 1097 aa13.9□□□□□ -0.18
APOBEC3B-201ENST00000333467 ATP6V0A2Q9Y487 856 aa13.9□□□□□ -0.18
APOBEC3B-201ENST00000333467 PSME4Q14997 1843 aa13.9□□□□□ -0.18
APOBEC3B-201ENST00000333467 TRIM28Q13263 835 aaKnown RBP13.9□□□□□ -0.19
APOBEC3B-201ENST00000333467 GRIPAP1Q4V328 841 aa13.9□□□□□ -0.19
APOBEC3B-201ENST00000333467 SMC1BQ8NDV3 1235 aa13.9□□□□□ -0.19
APOBEC3B-201ENST00000333467 MAP3K2Q9Y2U5 619 aa13.9□□□□□ -0.19
APOBEC3B-201ENST00000333467 IRS4O14654 1257 aaPredicted RBP13.89□□□□□ -0.19
APOBEC3B-201ENST00000333467 KCNA4P22459 653 aa13.89□□□□□ -0.19
APOBEC3B-201ENST00000333467 APLP1P51693 650 aa13.89□□□□□ -0.19
APOBEC3B-201ENST00000333467 ZBTB38Q8NAP3 1195 aaPredicted RBP13.89□□□□□ -0.19
APOBEC3B-201ENST00000333467 L3MBTL3Q96JM7 780 aaPredicted RBP13.89□□□□□ -0.19
APOBEC3B-201ENST00000333467 METTL22Q9BUU2 404 aaPredicted RBP13.89□□□□□ -0.19
APOBEC3B-201ENST00000333467 FZD9O00144 591 aa13.88□□□□□ -0.19
APOBEC3B-201ENST00000333467 G2E3Q7L622 706 aa13.88□□□□□ -0.19
APOBEC3B-201ENST00000333467 LARGE2Q8N3Y3 721 aa13.88□□□□□ -0.19
APOBEC3B-201ENST00000333467 CCDC191Q8NCU4 936 aa13.88□□□□□ -0.19
APOBEC3B-201ENST00000333467 JDP2Q8WYK2 163 aa13.88□□□□□ -0.19
APOBEC3B-201ENST00000333467 TMX4Q9H1E5 349 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3B-201ENST00000333467 CWC25Q9NXE8 425 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3B-201ENST00000333467 PI4KAP2A4QPH2 592 aa13.87□□□□□ -0.19
APOBEC3B-201ENST00000333467 PPIP5K2O43314 1243 aa13.87□□□□□ -0.19
APOBEC3B-201ENST00000333467 EXOSC9Q06265 439 aaKnown RBP13.87□□□□□ -0.19
APOBEC3B-201ENST00000333467 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
APOBEC3B-201ENST00000333467 AOC3Q16853 763 aa13.87□□□□□ -0.19
APOBEC3B-201ENST00000333467 KSR2Q6VAB6 950 aa13.87□□□□□ -0.19
APOBEC3B-201ENST00000333467 PI4KAP1Q8N8J0 262 aa13.87□□□□□ -0.19
APOBEC3B-201ENST00000333467 CLUAP1Q96AJ1 413 aa13.87□□□□□ -0.19
APOBEC3B-201ENST00000333467 IQCA1LA6NCM1 817 aa13.86□□□□□ -0.19
APOBEC3B-201ENST00000333467 BBOX1O75936 387 aa13.86□□□□□ -0.19
APOBEC3B-201ENST00000333467 PCCAP05165 728 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3B-201ENST00000333467 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
APOBEC3B-201ENST00000333467 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
APOBEC3B-201ENST00000333467 DPP8Q6V1X1 898 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3B-201ENST00000333467 SP8Q8IXZ3 490 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms