RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 DNAJB12Q9NXW2 375 aaKnown RBP7.1□□□□□ -1.27
SKP1-201ENST00000328392 USTQ9Y2C2 406 aa7.1□□□□□ -1.27
SKP1-201ENST00000328392 KCNMB2Q9Y691 235 aa7.1□□□□□ -1.27
SKP1-201ENST00000328392 M0R082 166 aa7.09□□□□□ -1.27
SKP1-201ENST00000328392 PDE4CQ08493 712 aa7.09□□□□□ -1.27
SKP1-201ENST00000328392 C20orf204Q6ZNR8 217 aa7.09□□□□□ -1.27
SKP1-201ENST00000328392 MICALL1Q8N3F8 863 aa7.09□□□□□ -1.27
SKP1-201ENST00000328392 ZNF417Q8TAU3 575 aa7.09□□□□□ -1.27
SKP1-201ENST00000328392 ZNF587Q96SQ5 575 aaPredicted RBP7.09□□□□□ -1.27
SKP1-201ENST00000328392 NAGPAQ9UK23 515 aa7.09□□□□□ -1.27
SKP1-201ENST00000328392 SLC6A14Q9UN76 642 aa7.09□□□□□ -1.27
SKP1-201ENST00000328392 ZBTB42B2RXF5 422 aa7.08□□□□□ -1.28
SKP1-201ENST00000328392 XYLBO75191 536 aa7.08□□□□□ -1.28
SKP1-201ENST00000328392 SSFA2P28290 1259 aa7.08□□□□□ -1.28
SKP1-201ENST00000328392 MLLT1Q03111 559 aaPredicted RBP7.08□□□□□ -1.28
SKP1-201ENST00000328392 PLA2G4EQ3MJ16 856 aa7.08□□□□□ -1.28
SKP1-201ENST00000328392 PHLDB3Q6NSJ2 640 aa7.08□□□□□ -1.28
SKP1-201ENST00000328392 GPAT2Q6NUI2 795 aa7.08□□□□□ -1.28
SKP1-201ENST00000328392 PLVAPQ9BX97 442 aa7.08□□□□□ -1.28
SKP1-201ENST00000328392 RARAP10276 462 aa7.07□□□□□ -1.28
SKP1-201ENST00000328392 TRIP4Q15650 581 aaPredicted RBP7.07□□□□□ -1.28
SKP1-201ENST00000328392 EFCC1Q9HA90 598 aa7.07□□□□□ -1.28
SKP1-201ENST00000328392 STIM2Q9P246 746 aa7.07□□□□□ -1.28
SKP1-201ENST00000328392 MAP3K6O95382 1288 aa7.06□□□□□ -1.28
SKP1-201ENST00000328392 EGFRP00533 1210 aa7.06□□□□□ -1.28
SKP1-201ENST00000328392 ZAP70P43403 619 aa7.06□□□□□ -1.28
SKP1-201ENST00000328392 DHX32Q7L7V1 743 aaKnown RBP7.06□□□□□ -1.28
SKP1-201ENST00000328392 NUDT8Q8WV74 236 aa7.06□□□□□ -1.28
SKP1-201ENST00000328392 PLAURQ03405 335 aa7.05□□□□□ -1.28
SKP1-201ENST00000328392 MTMR3Q13615 1198 aa7.05□□□□□ -1.28
SKP1-201ENST00000328392 PSAPL1Q6NUJ1 521 aa7.05□□□□□ -1.28
SKP1-201ENST00000328392 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
SKP1-201ENST00000328392 ATCAYQ86WG3 371 aa7.05□□□□□ -1.28
SKP1-201ENST00000328392 GPR152Q8TDT2 470 aa7.05□□□□□ -1.28
SKP1-201ENST00000328392 C11orf16Q9NQ32 467 aa7.05□□□□□ -1.28
SKP1-201ENST00000328392 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
SKP1-201ENST00000328392 MMP20O60882 483 aa7.04□□□□□ -1.28
SKP1-201ENST00000328392 NID1P14543 1247 aa7.04□□□□□ -1.28
SKP1-201ENST00000328392 CPB1P15086 417 aa7.04□□□□□ -1.28
SKP1-201ENST00000328392 FAM35AQ86V20 835 aa7.04□□□□□ -1.28
SKP1-201ENST00000328392 GTF3C2Q8WUA4 911 aaPredicted RBP7.04□□□□□ -1.28
SKP1-201ENST00000328392 GZF1Q9H116 711 aaPredicted RBP7.04□□□□□ -1.28
SKP1-201ENST00000328392 PRDM6Q9NQX0 595 aa7.04□□□□□ -1.28
SKP1-201ENST00000328392 PIK3R2O00459 728 aa7.03□□□□□ -1.28
SKP1-201ENST00000328392 BRD1O95696 1058 aa7.03□□□□□ -1.28
SKP1-201ENST00000328392 PERM1Q5SV97 790 aa7.03□□□□□ -1.28
SKP1-201ENST00000328392 TRPM4Q8TD43 1214 aa7.03□□□□□ -1.28
SKP1-201ENST00000328392 JPH1Q9HDC5 661 aaPredicted RBP7.03□□□□□ -1.28
SKP1-201ENST00000328392 TLR7Q9NYK1 1049 aaKnown RBP7.03□□□□□ -1.28
SKP1-201ENST00000328392 NOP53Q9NZM5 478 aaKnown RBP7.03□□□□□ -1.28
SKP1-201ENST00000328392 UBAP1LF5GYI3 381 aa7.02□□□□□ -1.29
SKP1-201ENST00000328392 J3QW42 95 aa7.02□□□□□ -1.29
SKP1-201ENST00000328392 LILRB5O75023 590 aa7.02□□□□□ -1.29
SKP1-201ENST00000328392 AFF1P51825 1210 aaKnown RBP7.02□□□□□ -1.29
SKP1-201ENST00000328392 HELQQ8TDG4 1101 aa7.02□□□□□ -1.29
SKP1-201ENST00000328392 PIK3R5Q8WYR1 880 aa7.02□□□□□ -1.29
SKP1-201ENST00000328392 IVNS1ABPQ9Y6Y0 642 aa7.02□□□□□ -1.29
SKP1-201ENST00000328392 C1QTNF9BB2RNN3 333 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 RGS9O75916 674 aaPredicted RBP7.01□□□□□ -1.29
SKP1-201ENST00000328392 PROCP04070 461 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 MPSTP25325 297 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 CHRNA4P43681 627 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 GPLD1P80108 840 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 CD163Q86VB7 1156 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 NLRP13Q86W25 1043 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 ABTB2Q8N961 1025 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 NSUN5Q96P11 429 aaKnown RBP7.01□□□□□ -1.29
SKP1-201ENST00000328392 SPOCK3Q9BQ16 436 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 LPIN3Q9BQK8 851 aa7.01□□□□□ -1.29
SKP1-201ENST00000328392 MSTNO14793 375 aa7□□□□□ -1.29
SKP1-201ENST00000328392 PSAPP07602 524 aa7□□□□□ -1.29
SKP1-201ENST00000328392 NRLP54845 237 aa7□□□□□ -1.29
SKP1-201ENST00000328392 GRIK5Q16478 980 aa7□□□□□ -1.29
SKP1-201ENST00000328392 ALYREFQ86V81 257 aaKnown RBP7□□□□□ -1.29
SKP1-201ENST00000328392 NUDT16Q96DE0 195 aaKnown RBP7□□□□□ -1.29
SKP1-201ENST00000328392 ANO2Q9NQ90 1003 aa7□□□□□ -1.29
SKP1-201ENST00000328392 LOC102724428A0A0B4J2F2 783 aa6.99□□□□□ -1.29
SKP1-201ENST00000328392 IGHA1P01876 353 aa6.99□□□□□ -1.29
SKP1-201ENST00000328392 EIF1AXP47813 144 aaKnown RBP6.99□□□□□ -1.29
SKP1-201ENST00000328392 SIK1P57059 783 aa6.99□□□□□ -1.29
SKP1-201ENST00000328392 TRAPPC3LQ5T215 181 aa6.99□□□□□ -1.29
SKP1-201ENST00000328392 COL13A1Q5TAT6 717 aaPredicted RBP6.99□□□□□ -1.29
SKP1-201ENST00000328392 B4GALNT3Q6L9W6 998 aa6.99□□□□□ -1.29
SKP1-201ENST00000328392 ELMSAN1Q6PJG2 1045 aa6.99□□□□□ -1.29
SKP1-201ENST00000328392 EDEM1Q92611 657 aa6.99□□□□□ -1.29
SKP1-201ENST00000328392 SMG9Q9H0W8 520 aaKnown RBP6.99□□□□□ -1.29
SKP1-201ENST00000328392 FAM13BQ9NYF5 915 aa6.99□□□□□ -1.29
SKP1-201ENST00000328392 A6NHS1 94 aa6.98□□□□□ -1.29
SKP1-201ENST00000328392 CYP2E1P05181 493 aaPredicted RBP6.98□□□□□ -1.29
SKP1-201ENST00000328392 EIF2AK2P19525 551 aaKnown RBP6.98□□□□□ -1.29
SKP1-201ENST00000328392 DNM1Q05193 864 aaKnown RBP6.98□□□□□ -1.29
SKP1-201ENST00000328392 KCNA1Q09470 495 aa6.98□□□□□ -1.29
SKP1-201ENST00000328392 ZNF211Q13398 564 aaPredicted RBP6.98□□□□□ -1.29
SKP1-201ENST00000328392 GRIK4Q16099 956 aa6.98□□□□□ -1.29
SKP1-201ENST00000328392 PCSK7Q16549 785 aa6.98□□□□□ -1.29
SKP1-201ENST00000328392 NOM1Q5C9Z4 860 aaKnown RBP6.98□□□□□ -1.29
SKP1-201ENST00000328392 ILDR2Q71H61 639 aa6.98□□□□□ -1.29
SKP1-201ENST00000328392 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
SKP1-201ENST00000328392 GGNBP2Q9H3C7 697 aa6.98□□□□□ -1.29
SKP1-201ENST00000328392 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms