RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 HMG20BQ9P0W2 317 aa25.66■■□□□ 1.7
LIMS2-201ENST00000324938 RBM27Q9P2N5 1060 aaKnown RBP25.66■■□□□ 1.7
LIMS2-201ENST00000324938 TMEM63CQ9P1W3 806 aa25.65■■□□□ 1.7
LIMS2-201ENST00000324938 NSFL1CQ9UNZ2 370 aaKnown RBP25.65■■□□□ 1.7
LIMS2-201ENST00000324938 COL14A1Q05707 1796 aaKnown RBP25.65■■□□□ 1.7
LIMS2-201ENST00000324938 SPEF2Q9C093 1822 aa25.65■■□□□ 1.7
LIMS2-201ENST00000324938 TAF5LO75529 589 aa25.64■■□□□ 1.7
LIMS2-201ENST00000324938 ZSCAN22P10073 491 aaPredicted RBP25.64■■□□□ 1.7
LIMS2-201ENST00000324938 NASPP49321 788 aaPredicted RBP25.64■■□□□ 1.7
LIMS2-201ENST00000324938 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.64■■□□□ 1.7
LIMS2-201ENST00000324938 PLCH1Q4KWH8 1693 aa25.64■■□□□ 1.7
LIMS2-201ENST00000324938 ZNF609O15014 1411 aa25.64■■□□□ 1.7
LIMS2-201ENST00000324938 STX6O43752 255 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 SYT1P21579 422 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 TSGA10IPQ3SY00 556 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 USPL1Q5W0Q7 1092 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 CCDC83Q8IWF9 413 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 IL15P40933 162 aaPredicted RBP25.63■■□□□ 1.69
LIMS2-201ENST00000324938 ISCA1Q9BUE6 129 aa25.63■■□□□ 1.69
LIMS2-201ENST00000324938 TMEM87AQ8NBN3 555 aa25.63■■□□□ 1.69
LIMS2-201ENST00000324938 DNAJC2Q99543 621 aaKnown RBP25.63■■□□□ 1.69
LIMS2-201ENST00000324938 ALDH8A1Q9H2A2 487 aaPredicted RBP25.63■■□□□ 1.69
LIMS2-201ENST00000324938 RRAGDQ9NQL2 400 aaPredicted RBP25.63■■□□□ 1.69
LIMS2-201ENST00000324938 ATG3Q9NT62 314 aa25.63■■□□□ 1.69
LIMS2-201ENST00000324938 VSIG10Q8N0Z9 540 aa25.62■■□□□ 1.69
LIMS2-201ENST00000324938 PALLDQ8WX93 1383 aa25.62■■□□□ 1.69
LIMS2-201ENST00000324938 ST3GAL1Q11201 340 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 ME3Q16798 604 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 BLOC1S2Q6QNY1 142 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 WNK3Q9BYP7 1800 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 LRP6O75581 1613 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 TEX13AQ9BXU3 409 aaPredicted RBP25.61■■□□□ 1.69
LIMS2-201ENST00000324938 NDUFB9Q9Y6M9 179 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 DISP2A7MBM2 1401 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 EYA2O00167 538 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 CIAO1O76071 339 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 GJB2P29033 226 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 ANKRD36CQ5JPF3 1778 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 RPS6KB1P23443 525 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 TCIRG1Q13488 830 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 ANKRD1Q15327 319 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 KBTBD3Q8NAB2 608 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 TPCN1Q9ULQ1 816 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 F13A1P00488 732 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 CCDC173Q0VFZ6 552 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 LRSAM1Q6UWE0 723 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 TICAM2Q86XR7 235 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 SH3TC1Q8TE82 1336 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 PRIM1P49642 420 aaKnown RBP25.58■■□□□ 1.69
LIMS2-201ENST00000324938 TRIM28Q13263 835 aaKnown RBP25.58■■□□□ 1.69
LIMS2-201ENST00000324938 PIGBQ92521 554 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 TAF6LQ9Y6J9 622 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 LAMA4Q16363 1823 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 KRT32Q14532 448 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 MCMDC2Q4G0Z9 681 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 DDX46Q7L014 1031 aaKnown RBP25.58■■□□□ 1.69
LIMS2-201ENST00000324938 USP48Q86UV5 1035 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 PPP1R9BQ96SB3 815 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 BTG4Q9NY30 223 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 COL9A3Q14050 684 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 FOXD4L6Q3SYB3 417 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 FOXD4L3Q6VB84 417 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 ASAP1Q9ULH1 1129 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 ATP6V1DQ9Y5K8 247 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 LRRC24Q50LG9 513 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 DNAJC10Q8IXB1 793 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 SYAP1Q96A49 352 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 NEUROD6Q96NK8 337 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 GDPD2Q9HCC8 539 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 U3KPZ7 1027 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 COL22A1Q8NFW1 1626 aaPredicted RBP25.56■■□□□ 1.68
LIMS2-201ENST00000324938 SYCE3A1L190 88 aa25.56■■□□□ 1.68
LIMS2-201ENST00000324938 RBSNQ9H1K0 784 aa25.56■■□□□ 1.68
LIMS2-201ENST00000324938 KIF6Q6ZMV9 814 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 ANP32BQ92688 251 aaKnown RBP25.55■■□□□ 1.68
LIMS2-201ENST00000324938 ZNF594Q96JF6 807 aaPredicted RBP25.55■■□□□ 1.68
LIMS2-201ENST00000324938 PAG1Q9NWQ8 432 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 MTMR6Q9Y217 621 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
LIMS2-201ENST00000324938 MYH3P11055 1940 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 GADD45BO75293 160 aaPredicted RBP25.55■■□□□ 1.68
LIMS2-201ENST00000324938 NECAB1Q8N987 351 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 TIMM10P62072 90 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 TOB2Q14106 344 aaPredicted RBP25.54■■□□□ 1.68
LIMS2-201ENST00000324938 CCDC129Q6ZRS4 1044 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 SEC62Q99442 399 aaKnown RBP25.54■■□□□ 1.68
LIMS2-201ENST00000324938 FBXO3Q9UK99 471 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 CNPY2Q9Y2B0 182 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 CHGBP05060 677 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 PCCAP05165 728 aaPredicted RBP25.54■■□□□ 1.68
LIMS2-201ENST00000324938 PDIA4P13667 645 aaKnown RBP25.54■■□□□ 1.68
LIMS2-201ENST00000324938 PLA2G12BQ9BX93 195 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 STARD3NLO95772 234 aa25.53■■□□□ 1.68
LIMS2-201ENST00000324938 TRIM44Q96DX7 344 aaPredicted RBP25.53■■□□□ 1.68
LIMS2-201ENST00000324938 BCL9O00512 1426 aa25.53■■□□□ 1.68
LIMS2-201ENST00000324938 A0A1B0GUL7 405 aa25.52■■□□□ 1.68
LIMS2-201ENST00000324938 GOLIM4O00461 696 aa25.52■■□□□ 1.68
LIMS2-201ENST00000324938 HELLSQ9NRZ9 838 aa25.52■■□□□ 1.68
LIMS2-201ENST00000324938 ZNF330Q9Y3S2 320 aaPredicted RBP25.52■■□□□ 1.68
LIMS2-201ENST00000324938 CCDC9Q9Y3X0 531 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms