RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 IL1RAPL2Q9NP60 686 aa8.77□□□□□ -1.01
NPHP1-201ENST00000316534 DBNLQ9UJU6 430 aaKnown RBP8.77□□□□□ -1.01
NPHP1-201ENST00000316534 ANKRD31Q8N7Z5 1873 aa8.77□□□□□ -1.01
NPHP1-201ENST00000316534 CHD4Q14839 1912 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 PTCD1O75127 700 aaKnown RBP8.76□□□□□ -1.01
NPHP1-201ENST00000316534 CYP2E1P05181 493 aaPredicted RBP8.76□□□□□ -1.01
NPHP1-201ENST00000316534 RIPOR2Q9Y4F9 1068 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 EYA2O00167 538 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 HIP1O00291 1037 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 G3BP1Q13283 466 aaKnown RBP eCLIP8.76□□□□□ -1.01
NPHP1-201ENST00000316534 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
NPHP1-201ENST00000316534 LAMB1P07942 1786 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 SH3TC1Q8TE82 1336 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 ATP5J2-PTCD1G3V325 749 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 NTSR2O95665 410 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 CRKLP46109 303 aaKnown RBP8.76□□□□□ -1.01
NPHP1-201ENST00000316534 CUL4AQ13619 759 aa8.76□□□□□ -1.01
NPHP1-201ENST00000316534 CACNA1SQ13698 1873 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 DDX60LQ5H9U9 1706 aaKnown RBP8.75□□□□□ -1.01
NPHP1-201ENST00000316534 SLC10A5Q5PT55 438 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 LMBR1LQ6UX01 489 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 TTLL11Q8NHH1 800 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 TTC14Q96N46 770 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 FGFR2P21802 821 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 PARP10Q53GL7 1025 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 LINC00116Q8NCU8 138 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 GPATCH3Q96I76 525 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 TM6SF1Q9BZW5 370 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 FOCADQ5VW36 1801 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 K7ELQ4 463 aaPredicted RBP8.75□□□□□ -1.01
NPHP1-201ENST00000316534 TFCP2Q12800 502 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 NECTIN1Q15223 517 aa8.75□□□□□ -1.01
NPHP1-201ENST00000316534 GJD4Q96KN9 370 aaPredicted RBP8.75□□□□□ -1.01
NPHP1-201ENST00000316534 ECM29Q5VYK3 1845 aa8.74□□□□□ -1.01
NPHP1-201ENST00000316534 CTSWP56202 376 aa8.74□□□□□ -1.01
NPHP1-201ENST00000316534 TSHZ3Q63HK5 1081 aa8.74□□□□□ -1.01
NPHP1-201ENST00000316534 MAP4K1Q92918 833 aa8.74□□□□□ -1.01
NPHP1-201ENST00000316534 ZBTB3Q9H5J0 574 aa8.74□□□□□ -1.01
NPHP1-201ENST00000316534 PDE8AO60658 829 aa8.74□□□□□ -1.01
NPHP1-201ENST00000316534 AACSQ86V21 672 aa8.74□□□□□ -1.01
NPHP1-201ENST00000316534 TAF1P21675 1872 aa8.73□□□□□ -1.01
NPHP1-201ENST00000316534 BCL2L12Q9HB09 334 aa8.73□□□□□ -1.01
NPHP1-201ENST00000316534 USP21Q9UK80 565 aa8.73□□□□□ -1.01
NPHP1-201ENST00000316534 MCM2P49736 904 aa8.73□□□□□ -1.01
NPHP1-201ENST00000316534 DZIP3Q86Y13 1208 aaKnown RBP8.73□□□□□ -1.01
NPHP1-201ENST00000316534 KLHDC4Q8TBB5 520 aa8.73□□□□□ -1.01
NPHP1-201ENST00000316534 IRS2Q9Y4H2 1338 aa8.73□□□□□ -1.01
NPHP1-201ENST00000316534 IFIT2P09913 472 aaKnown RBP8.73□□□□□ -1.01
NPHP1-201ENST00000316534 PIP4K2BP78356 416 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 RAB3GAP1Q15042 981 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 FBXL16Q8N461 479 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 PALD1Q9ULE6 856 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 CDK5RAP2Q96SN8 1893 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 KCNQ2O43526 872 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 ARID4AP29374 1257 aaPredicted RBP8.72□□□□□ -1.01
NPHP1-201ENST00000316534 HSPA1LP34931 641 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 INTS4Q96HW7 963 aaKnown RBP8.72□□□□□ -1.01
NPHP1-201ENST00000316534 KIF13BQ9NQT8 1826 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 COL11A2P13942 1736 aaPredicted RBP8.72□□□□□ -1.01
NPHP1-201ENST00000316534 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 SF3B3Q15393 1217 aaKnown RBP8.72□□□□□ -1.01
NPHP1-201ENST00000316534 FAM98CQ17RN3 349 aaKnown RBP8.72□□□□□ -1.01
NPHP1-201ENST00000316534 CCDC88AQ3V6T2 1871 aa8.72□□□□□ -1.01
NPHP1-201ENST00000316534 RPS6KA4O75676 772 aa8.71□□□□□ -1.01
NPHP1-201ENST00000316534 LRRC24Q50LG9 513 aa8.71□□□□□ -1.01
NPHP1-201ENST00000316534 SUSD4Q5VX71 490 aa8.71□□□□□ -1.01
NPHP1-201ENST00000316534 RBM42Q9BTD8 480 aaKnown RBP8.71□□□□□ -1.01
NPHP1-201ENST00000316534 SNX14Q9Y5W7 946 aa8.71□□□□□ -1.01
NPHP1-201ENST00000316534 CCDC171Q6TFL3 1326 aa8.71□□□□□ -1.01
NPHP1-201ENST00000316534 SLC4A3P48751 1232 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 HSCBQ8IWL3 235 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 CHMP5Q9NZZ3 219 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 AFF2P51816 1311 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 MROH5Q6ZUA9 1318 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 APBB1O00213 710 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 KBTBD3Q8NAB2 608 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 RUFY2Q8WXA3 655 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 BCL11BQ9C0K0 894 aaPredicted RBP8.71□□□□□ -1.02
NPHP1-201ENST00000316534 ZSWIM6Q9HCJ5 1215 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 HELLSQ9NRZ9 838 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 TRPC5Q9UL62 973 aaPredicted RBP8.71□□□□□ -1.02
NPHP1-201ENST00000316534 ZMYM6O95789 1325 aa8.71□□□□□ -1.02
NPHP1-201ENST00000316534 PDS5AQ29RF7 1337 aaKnown RBP8.71□□□□□ -1.02
NPHP1-201ENST00000316534 NFKBIBQ15653 356 aa8.7□□□□□ -1.02
NPHP1-201ENST00000316534 C8orf37Q96NL8 207 aa8.7□□□□□ -1.02
NPHP1-201ENST00000316534 DBNDD2Q9BQY9 259 aa8.7□□□□□ -1.02
NPHP1-201ENST00000316534 NARFQ9UHQ1 456 aa8.7□□□□□ -1.02
NPHP1-201ENST00000316534 AKAP2Q9Y2D5 859 aa8.7□□□□□ -1.02
NPHP1-201ENST00000316534 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
NPHP1-201ENST00000316534 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
NPHP1-201ENST00000316534 ZMYM1Q5SVZ6 1142 aa8.7□□□□□ -1.02
NPHP1-201ENST00000316534 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
NPHP1-201ENST00000316534 NGLY1Q96IV0 654 aa8.7□□□□□ -1.02
NPHP1-201ENST00000316534 PUS3Q9BZE2 481 aaKnown RBP8.7□□□□□ -1.02
NPHP1-201ENST00000316534 CCDC8Q9H0W5 538 aaPredicted RBP8.7□□□□□ -1.02
NPHP1-201ENST00000316534 GREM2Q9H772 168 aa8.7□□□□□ -1.02
NPHP1-201ENST00000316534 CWC22Q9HCG8 908 aaKnown RBP8.7□□□□□ -1.02
NPHP1-201ENST00000316534 CARMIL3Q8ND23 1372 aa8.69□□□□□ -1.02
NPHP1-201ENST00000316534 ZNF804BA4D1E1 1349 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms