RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 KAT6BQ8WYB5 2073 aa16.76■□□□□ 0.27
CSNK1D-202ENST00000314028 MARCKSP29966 332 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-202ENST00000314028 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
CSNK1D-202ENST00000314028 MRVI1Q9Y6F6 885 aa16.76■□□□□ 0.27
CSNK1D-202ENST00000314028 CHGBP05060 677 aa16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 ZNF75DP51815 510 aa16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 PTPN21Q16825 1174 aa16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 ZFP91Q96JP5 570 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 SLFNL1Q499Z3 407 aa16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 VGLL3A8MV65 326 aa16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 TFCP2Q12800 502 aa16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 STX1AQ16623 288 aa16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 SETBP1Q9Y6X0 1596 aa16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-202ENST00000314028 RPS6KB1P23443 525 aa16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 ZSCAN25Q6NSZ9 544 aa16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 AATKQ6ZMQ8 1374 aa16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 TIMM10P62072 90 aa16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 TRIM29Q14134 588 aa16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 DBNDD2Q9BQY9 259 aa16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 RXRAP19793 462 aa16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 C8orf76Q96K31 380 aa16.74■□□□□ 0.27
CSNK1D-202ENST00000314028 PTPRMP28827 1452 aa16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 CACTINQ8WUQ7 758 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 ZBTB3Q9H5J0 574 aa16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 PTPDC1A2A3K4 754 aa16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 SNW1Q13573 536 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 ELF2Q15723 593 aa16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 CPLX2Q6PUV4 134 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 UBXN4Q92575 508 aa16.73■□□□□ 0.27
CSNK1D-202ENST00000314028 SYT10Q6XYQ8 523 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 GTF3C6Q969F1 213 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 KCNF1Q9H3M0 494 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 NRXN1Q9ULB1 1477 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 IFIT1P09914 478 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 KCNA6P17658 529 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 LMBR1LQ6UX01 489 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 LINS1Q8NG48 757 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 GOLGA8BA8MQT2 603 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 IFNKQ9P0W0 207 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 RPAP1Q9BWH6 1393 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-202ENST00000314028 AP5Z1O43299 807 aa16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 TTC14Q96N46 770 aa16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 CLSTN2Q9H4D0 955 aa16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 ZNF215Q9UL58 517 aaPredicted RBP16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 KIAA1210Q9ULL0 1709 aa16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 SBNO1A3KN83 1393 aa16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 CD163L1Q9NR16 1453 aa16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 SMTNL1A8MU46 457 aa16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 SLC3A2P08195 630 aaKnown RBP16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 OLFM4Q6UX06 510 aa16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 ORC3Q9UBD5 711 aaPredicted RBP16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
CSNK1D-202ENST00000314028 ARHGEF40Q8TER5 1519 aa16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 TTC39AQ5SRH9 613 aa16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 AEBP2Q6ZN18 517 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 ARGLU1Q9NWB6 273 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 ATP7BP35670 1465 aa16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 RASSF8Q8NHQ8 419 aa16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■■■■ 37.7
CSNK1D-202ENST00000314028 TEX35Q5T0J7 233 aa16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 MAP2P11137 1827 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-202ENST00000314028 SSH2Q76I76 1423 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 IDH1O75874 414 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 KLHL10Q6JEL2 608 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 C11orf57Q6ZUT1 292 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 ANKRD24Q8TF21 1146 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 PAXBP1Q9Y5B6 917 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 MLH3Q9UHC1 1453 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 AOX1Q06278 1338 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 ADGRB2O60241 1585 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 ZNF710Q8N1W2 664 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 CPLX3Q8WVH0 158 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 USP28Q96RU2 1077 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 MYO3AQ8NEV4 1616 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 TNRQ92752 1358 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 CPS1P31327 1500 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 MICU3Q86XE3 530 aa16.69■□□□□ 0.26
CSNK1D-202ENST00000314028 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 CABP4P57796 275 aa16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 MCMDC2Q4G0Z9 681 aa16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 HMG20BQ9P0W2 317 aa16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 ZC3H13Q5T200 1668 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 PLEKHG3A1L390 1219 aa16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 COL9A3Q14050 684 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 CEP126Q9P2H0 1117 aa16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 CPSF1Q10570 1443 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms