RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 TYRO3Q06418 890 aa8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 UVSSAQ2YD98 709 aa8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 TDRD12Q587J7 1177 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 JAKMIP3Q5VZ66 844 aa8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 LUZP1Q86V48 1076 aa8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 ZSCAN16Q9H4T2 348 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 ZNF652Q9Y2D9 606 aa8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 NDUFB9Q9Y6M9 179 aa8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 PNMA6EA0A0J9YXQ4 647 aa8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 ALDH1L1O75891 902 aa8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 CASQ1P31415 396 aa8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 RNF41Q9H4P4 317 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 SEC63Q9UGP8 760 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-203ENST00000312123 NUP160Q12769 1436 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 ZBTB43O43298 467 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 UBASH3AP57075 661 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 SPA17Q15506 151 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 CEP135Q66GS9 1140 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 CHAMP1Q96JM3 812 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 DNAI1Q9UI46 699 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 PTGS1P23219 599 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 GSDMDP57764 484 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 CCDC96Q2M329 555 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 C6orf229H3BNL8 230 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 N4BP3O15049 544 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 GTF2F1P35269 517 aaKnown RBP eCLIP8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 MTIF2P46199 727 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 CRACR2BQ8N4Y2 399 aaPredicted RBP8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 TAF4BQ92750 862 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.16□□□□□ -1.16e-7■■■■■ 57.6
GAPVD1-203ENST00000312123 CGNQ9P2M7 1197 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 MYO6Q9UM54 1294 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 MSH6P52701 1360 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 A2MP01023 1474 aa8.16□□□□□ -1.1
GAPVD1-203ENST00000312123 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 TFCP2Q12800 502 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 SPTY2D1Q68D10 685 aaPredicted RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 CCDC129Q6ZRS4 1044 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 MRPS27Q92552 414 aaKnown RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 ZFP91Q96JP5 570 aaPredicted RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 WDR62O43379 1518 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 NPHP3Q7Z494 1330 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 DYNC1I1O14576 645 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 PRC1O43663 620 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 KIAA0754O94854 1291 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 NBPF7P0C2Y1 421 aaPredicted RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 IBSPP21815 317 aaPredicted RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 MATR3P43243 847 aaKnown RBP eCLIP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 AKAP4Q5JQC9 854 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 C17orf53Q8N3J3 647 aaPredicted RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 ZNF397Q8NF99 534 aaPredicted RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 CCDC148Q8NFR7 591 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 CCDC12Q8WUD4 166 aaPredicted RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 BICC1Q9H694 974 aaKnown RBP8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 TNRQ92752 1358 aa8.15□□□□□ -1.1
GAPVD1-203ENST00000312123 NEMFO60524 1076 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 ERLIN2O94905 339 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 GCP02774 474 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 KCNA6P17658 529 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 SSR1P43307 286 aaKnown RBP8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 WTAPQ15007 396 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 FKBP15Q5T1M5 1219 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 PHF23Q9BUL5 403 aaPredicted RBP8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 PAG1Q9NWQ8 432 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 TTC21AQ8NDW8 1320 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 LIG1P18858 919 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 IL13P35225 146 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 RDXP35241 583 aaKnown RBP8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 CNKSR2Q8WXI2 1034 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 LGR6Q9HBX8 967 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 NPATQ14207 1427 aa8.15□□□□□ -1.11
GAPVD1-203ENST00000312123 RAPGEF6Q8TEU7 1601 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 CYP7A1P22680 504 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 STX17P56962 302 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 TCERG1LQ5VWI1 586 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 CCDC191Q8NCU4 936 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 ZCRB1Q8TBF4 217 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 ACSBG1Q96GR2 724 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 FAM227BQ96M60 508 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 ZMYND15Q9H091 742 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 COL17A1Q9UMD9 1497 aaPredicted RBP8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 FLT4P35916 1363 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 PTPDC1A2A3K4 754 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 IL15P40933 162 aaPredicted RBP8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 TCOF1Q13428 1488 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 A0A1B0GVL5 298 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 CHL1O00533 1208 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 SPTLC2O15270 562 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 TTF1Q15361 905 aaPredicted RBP8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 OTUD7BQ6GQQ9 843 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 MIGA1Q8NAN2 632 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 PRIMPOLQ96LW4 560 aa8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 NCOA5Q9HCD5 579 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-203ENST00000312123 ASXL2Q76L83 1435 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 DUOX2Q9NRD8 1548 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 MYO1BO43795 1136 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 YEATS4O95619 227 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 INTS4Q96HW7 963 aaKnown RBP8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 DBNDD2Q9BQY9 259 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms