RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 IFIT2P09913 472 aaKnown RBP27.69■■■□□ 2.02
IRF3-201ENST00000309877 GREM2Q9H772 168 aa27.69■■■□□ 2.02
IRF3-201ENST00000309877 STAP2Q9UGK3 403 aa27.69■■■□□ 2.02
IRF3-201ENST00000309877 UBR3Q6ZT12 1888 aa27.69■■■□□ 2.02
IRF3-201ENST00000309877 ANKRD18BA2A2Z9 1011 aa27.68■■■□□ 2.02
IRF3-201ENST00000309877 ITGA6P23229 1130 aa27.68■■■□□ 2.02
IRF3-201ENST00000309877 AACSQ86V21 672 aa27.68■■■□□ 2.02
IRF3-201ENST00000309877 C4AP0C0L4 1744 aa27.68■■■□□ 2.02
IRF3-201ENST00000309877 EYA2O00167 538 aa27.68■■■□□ 2.02
IRF3-201ENST00000309877 GSPT1P15170 499 aaKnown RBP27.68■■■□□ 2.02
IRF3-201ENST00000309877 IL15P40933 162 aaPredicted RBP27.68■■■□□ 2.02
IRF3-201ENST00000309877 NBPF5PQ86XG9 351 aaPredicted RBP27.68■■■□□ 2.02
IRF3-201ENST00000309877 CIAO1O76071 339 aa27.67■■■□□ 2.02
IRF3-201ENST00000309877 TFCP2Q12800 502 aa27.67■■■□□ 2.02
IRF3-201ENST00000309877 ERFEQ4G0M1 354 aa27.67■■■□□ 2.02
IRF3-201ENST00000309877 AKT1S1Q96B36 256 aa27.67■■■□□ 2.02
IRF3-201ENST00000309877 FBXO3Q9UK99 471 aa27.67■■■□□ 2.02
IRF3-201ENST00000309877 ZNF827Q17R98 1081 aa27.66■■■□□ 2.02
IRF3-201ENST00000309877 AOX1Q06278 1338 aa27.66■■■□□ 2.02
IRF3-201ENST00000309877 SF3B2Q13435 895 aaKnown RBP27.65■■■□□ 2.02
IRF3-201ENST00000309877 TSHZ3Q63HK5 1081 aa27.65■■■□□ 2.02
IRF3-201ENST00000309877 TPTE2Q6XPS3 522 aa27.65■■■□□ 2.02
IRF3-201ENST00000309877 ATG9AQ7Z3C6 839 aa27.65■■■□□ 2.02
IRF3-201ENST00000309877 CCDC152Q4G0S7 254 aa27.65■■■□□ 2.02
IRF3-201ENST00000309877 LRRC24Q50LG9 513 aa27.65■■■□□ 2.02
IRF3-201ENST00000309877 GPATCH3Q96I76 525 aa27.65■■■□□ 2.02
IRF3-201ENST00000309877 GYS1P13807 737 aa27.64■■■□□ 2.02
IRF3-201ENST00000309877 EAF2Q96CJ1 260 aaPredicted RBP27.64■■■□□ 2.02
IRF3-201ENST00000309877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.64■■■□□ 2.02
IRF3-201ENST00000309877 NPHP1O15259 732 aa27.63■■■□□ 2.01
IRF3-201ENST00000309877 EN1Q05925 392 aaPredicted RBP27.63■■■□□ 2.01
IRF3-201ENST00000309877 NFIXQ14938 502 aa27.63■■■□□ 2.01
IRF3-201ENST00000309877 ILDR1Q86SU0 546 aaPredicted RBP27.63■■■□□ 2.01
IRF3-201ENST00000309877 PUS3Q9BZE2 481 aaKnown RBP27.63■■■□□ 2.01
IRF3-201ENST00000309877 RGPD3A6NKT7 1758 aaPredicted RBP27.63■■■□□ 2.01
IRF3-201ENST00000309877 RGPD4Q7Z3J3 1758 aa27.63■■■□□ 2.01
IRF3-201ENST00000309877 CARMIL3Q8ND23 1372 aa27.63■■■□□ 2.01
IRF3-201ENST00000309877 FLAD1Q8NFF5 587 aa27.62■■■□□ 2.01
IRF3-201ENST00000309877 CCDC8Q9H0W5 538 aaPredicted RBP27.62■■■□□ 2.01
IRF3-201ENST00000309877 MYH3P11055 1940 aa27.62■■■□□ 2.01
IRF3-201ENST00000309877 TTC41PQ6P2S7 1318 aa27.62■■■□□ 2.01
IRF3-201ENST00000309877 EZH2Q15910 746 aaKnown RBP27.62■■■□□ 2.01
IRF3-201ENST00000309877 TNNI3KQ59H18 835 aa27.62■■■□□ 2.01
IRF3-201ENST00000309877 SLC10A5Q5PT55 438 aa27.62■■■□□ 2.01
IRF3-201ENST00000309877 CAMKK2Q96RR4 588 aa27.62■■■□□ 2.01
IRF3-201ENST00000309877 FPGT-TNNI3KV9GXZ4 949 aa27.62■■■□□ 2.01
IRF3-201ENST00000309877 MSH5O43196 834 aa27.61■■■□□ 2.01
IRF3-201ENST00000309877 SDSP20132 328 aa27.61■■■□□ 2.01
IRF3-201ENST00000309877 LDHAL6AQ6ZMR3 332 aa27.61■■■□□ 2.01
IRF3-201ENST00000309877 ERC2O15083 957 aa27.6■■■□□ 2.01
IRF3-201ENST00000309877 ECHDC1Q9NTX5 307 aa27.6■■■□□ 2.01
IRF3-201ENST00000309877 CEP126Q9P2H0 1117 aa27.6■■■□□ 2.01
IRF3-201ENST00000309877 DDX60Q8IY21 1712 aaKnown RBP27.6■■■□□ 2.01
IRF3-201ENST00000309877 BAG6P46379 1132 aa27.59■■■□□ 2.01
IRF3-201ENST00000309877 GPR108Q9NPR9 543 aa27.59■■■□□ 2.01
IRF3-201ENST00000309877 CNNM1Q9NRU3 951 aa27.59■■■□□ 2.01
IRF3-201ENST00000309877 COL24A1Q17RW2 1714 aa27.59■■■□□ 2.01
IRF3-201ENST00000309877 CDC45O75419 566 aa27.59■■■□□ 2.01
IRF3-201ENST00000309877 RTL9Q8NET4 1388 aa27.58■■■□□ 2.01
IRF3-201ENST00000309877 LAMB2P55268 1798 aa27.58■■■□□ 2.01
IRF3-201ENST00000309877 COL23A1Q86Y22 540 aaPredicted RBP27.58■■■□□ 2.01
IRF3-201ENST00000309877 PI4K2BQ8TCG2 481 aa27.58■■■□□ 2.01
IRF3-201ENST00000309877 NLRP3Q96P20 1036 aa27.58■■■□□ 2.01
IRF3-201ENST00000309877 GLRX3O76003 335 aaKnown RBP27.57■■■□□ 2
IRF3-201ENST00000309877 SF3B3Q15393 1217 aaKnown RBP27.57■■■□□ 2
IRF3-201ENST00000309877 ABCC12Q96J65 1359 aa27.57■■■□□ 2
IRF3-201ENST00000309877 TRIM6-TRIM34B2RNG4 842 aa27.56■■■□□ 2
IRF3-201ENST00000309877 CNBD1Q8NA66 436 aa27.56■■■□□ 2
IRF3-201ENST00000309877 SEC31BQ9NQW1 1179 aa27.56■■■□□ 2
IRF3-201ENST00000309877 TLR7Q9NYK1 1049 aaKnown RBP27.56■■■□□ 2
IRF3-201ENST00000309877 RIPOR2Q9Y4F9 1068 aa27.56■■■□□ 2
IRF3-201ENST00000309877 TM4SF1P30408 202 aa27.56■■■□□ 2
IRF3-201ENST00000309877 MPHOSPH8Q99549 860 aa27.56■■■□□ 2
IRF3-201ENST00000309877 AKAP2Q9Y2D5 859 aa27.56■■■□□ 2
IRF3-201ENST00000309877 SEC24BO95487 1268 aa27.55■■■□□ 2
IRF3-201ENST00000309877 IGHMBP2P38935 993 aaKnown RBP27.55■■■□□ 2
IRF3-201ENST00000309877 METTL24Q5JXM2 366 aa27.55■■■□□ 2
IRF3-201ENST00000309877 RILPL2Q969X0 211 aa27.55■■■□□ 2
IRF3-201ENST00000309877 NEUROD6Q96NK8 337 aa27.55■■■□□ 2
IRF3-201ENST00000309877 CASC1Q6TDU7 716 aa27.54■■■□□ 2
IRF3-201ENST00000309877 TBC1D9Q6ZT07 1266 aa27.54■■■□□ 2
IRF3-201ENST00000309877 C3orf67Q6ZVT6 689 aa27.54■■■□□ 2
IRF3-201ENST00000309877 CCDC24Q8N4L8 307 aa27.54■■■□□ 2
IRF3-201ENST00000309877 CDC5LQ99459 802 aaKnown RBP27.54■■■□□ 2
IRF3-201ENST00000309877 UPF2Q9HAU5 1272 aaKnown RBP27.54■■■□□ 2
IRF3-201ENST00000309877 NLGN1Q8N2Q7 840 aa27.53■■■□□ 2
IRF3-201ENST00000309877 STK32BQ9NY57 414 aa27.53■■■□□ 2
IRF3-201ENST00000309877 DBNLQ9UJU6 430 aaKnown RBP27.53■■■□□ 2
IRF3-201ENST00000309877 SERPINB2P05120 415 aa27.52■■■□□ 2
IRF3-201ENST00000309877 DBNDD2Q9BQY9 259 aa27.52■■■□□ 2
IRF3-201ENST00000309877 PNPLA7Q6ZV29 1317 aa27.51■■□□□ 1.99
IRF3-201ENST00000309877 TIMM10P62072 90 aa27.51■■□□□ 1.99
IRF3-201ENST00000309877 SLC15A2Q16348 729 aa27.51■■□□□ 1.99
IRF3-201ENST00000309877 MROH5Q6ZUA9 1318 aa27.5■■□□□ 1.99
IRF3-201ENST00000309877 A0A1B0GUL7 405 aa27.5■■□□□ 1.99
IRF3-201ENST00000309877 MAP4K4O95819 1239 aaPredicted RBP27.5■■□□□ 1.99
IRF3-201ENST00000309877 ST5P78524 1137 aa27.5■■□□□ 1.99
IRF3-201ENST00000309877 PRR5LQ6MZQ0 368 aa27.5■■□□□ 1.99
IRF3-201ENST00000309877 DEFB132Q7Z7B7 95 aa27.5■■□□□ 1.99
IRF3-201ENST00000309877 CNTROBQ8N137 903 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms