RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 UBR3Q6ZT12 1888 aa21.52■■□□□ 1.04
KRT28-201ENST00000306658 EYA2O00167 538 aa21.52■■□□□ 1.04
KRT28-201ENST00000306658 IL15P40933 162 aaPredicted RBP21.52■■□□□ 1.04
KRT28-201ENST00000306658 TAF7LQ5H9L4 462 aa21.52■■□□□ 1.04
KRT28-201ENST00000306658 ANKRD18BA2A2Z9 1011 aa21.51■■□□□ 1.03
KRT28-201ENST00000306658 AACSQ86V21 672 aa21.51■■□□□ 1.03
KRT28-201ENST00000306658 GPATCH3Q96I76 525 aa21.51■■□□□ 1.03
KRT28-201ENST00000306658 HCLS1P14317 486 aaPredicted RBP21.5■■□□□ 1.03
KRT28-201ENST00000306658 ITGA6P23229 1130 aa21.5■■□□□ 1.03
KRT28-201ENST00000306658 GTF2E1P29083 439 aaPredicted RBP21.5■■□□□ 1.03
KRT28-201ENST00000306658 CCDC85AQ96PX6 553 aaPredicted RBP21.5■■□□□ 1.03
KRT28-201ENST00000306658 GREM2Q9H772 168 aa21.5■■□□□ 1.03
KRT28-201ENST00000306658 C4AP0C0L4 1744 aa21.5■■□□□ 1.03
KRT28-201ENST00000306658 TTC41PQ6P2S7 1318 aa21.5■■□□□ 1.03
KRT28-201ENST00000306658 TFCP2Q12800 502 aa21.5■■□□□ 1.03
KRT28-201ENST00000306658 ATG9AQ7Z3C6 839 aa21.5■■□□□ 1.03
KRT28-201ENST00000306658 ZNF594Q96JF6 807 aaPredicted RBP21.5■■□□□ 1.03
KRT28-201ENST00000306658 TPTE2Q6XPS3 522 aa21.49■■□□□ 1.03
KRT28-201ENST00000306658 EAF2Q96CJ1 260 aaPredicted RBP21.49■■□□□ 1.03
KRT28-201ENST00000306658 TNS1Q9HBL0 1735 aaKnown RBP21.49■■□□□ 1.03
KRT28-201ENST00000306658 ERC2O15083 957 aa21.48■■□□□ 1.03
KRT28-201ENST00000306658 SDSP20132 328 aa21.48■■□□□ 1.03
KRT28-201ENST00000306658 CCDC152Q4G0S7 254 aa21.48■■□□□ 1.03
KRT28-201ENST00000306658 NBPF5PQ86XG9 351 aaPredicted RBP21.48■■□□□ 1.03
KRT28-201ENST00000306658 CDC45O75419 566 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 TSHZ3Q63HK5 1081 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 GPR108Q9NPR9 543 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 ECHDC1Q9NTX5 307 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 TFCP2L1Q9NZI6 479 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 RGPD3A6NKT7 1758 aaPredicted RBP21.47■■□□□ 1.03
KRT28-201ENST00000306658 RGPD4Q7Z3J3 1758 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 ERFEQ4G0M1 354 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 LRRC24Q50LG9 513 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 TNNI3KQ59H18 835 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 SLC10A5Q5PT55 438 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 UPF2Q9HAU5 1272 aaKnown RBP21.47■■□□□ 1.03
KRT28-201ENST00000306658 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.47■■□□□ 1.03
KRT28-201ENST00000306658 FPGT-TNNI3KV9GXZ4 949 aa21.47■■□□□ 1.03
KRT28-201ENST00000306658 EIF5BO60841 1220 aaKnown RBP21.46■■□□□ 1.03
KRT28-201ENST00000306658 GLRX3O76003 335 aaKnown RBP21.46■■□□□ 1.03
KRT28-201ENST00000306658 LDHAL6AQ6ZMR3 332 aa21.46■■□□□ 1.03
KRT28-201ENST00000306658 AKT1S1Q96B36 256 aa21.46■■□□□ 1.03
KRT28-201ENST00000306658 CEP126Q9P2H0 1117 aa21.46■■□□□ 1.03
KRT28-201ENST00000306658 LAMB2P55268 1798 aa21.46■■□□□ 1.03
KRT28-201ENST00000306658 DDX60Q8IY21 1712 aaKnown RBP21.45■■□□□ 1.02
KRT28-201ENST00000306658 FLAD1Q8NFF5 587 aa21.45■■□□□ 1.02
KRT28-201ENST00000306658 PI4K2BQ8TCG2 481 aa21.45■■□□□ 1.02
KRT28-201ENST00000306658 PUS3Q9BZE2 481 aaKnown RBP21.45■■□□□ 1.02
KRT28-201ENST00000306658 CCDC8Q9H0W5 538 aaPredicted RBP21.45■■□□□ 1.02
KRT28-201ENST00000306658 COL24A1Q17RW2 1714 aa21.45■■□□□ 1.02
KRT28-201ENST00000306658 CARMIL3Q8ND23 1372 aa21.44■■□□□ 1.02
KRT28-201ENST00000306658 RTL9Q8NET4 1388 aa21.44■■□□□ 1.02
KRT28-201ENST00000306658 GYS1P13807 737 aa21.44■■□□□ 1.02
KRT28-201ENST00000306658 CASC1Q6TDU7 716 aa21.44■■□□□ 1.02
KRT28-201ENST00000306658 TRIM6-TRIM34B2RNG4 842 aa21.44■■□□□ 1.02
KRT28-201ENST00000306658 SEC24BO95487 1268 aa21.44■■□□□ 1.02
KRT28-201ENST00000306658 NFIXQ14938 502 aa21.44■■□□□ 1.02
KRT28-201ENST00000306658 TBC1D9Q6ZT07 1266 aa21.44■■□□□ 1.02
KRT28-201ENST00000306658 CNNM1Q9NRU3 951 aa21.44■■□□□ 1.02
KRT28-201ENST00000306658 NPHP1O15259 732 aa21.43■■□□□ 1.02
KRT28-201ENST00000306658 SF3B2Q13435 895 aaKnown RBP21.43■■□□□ 1.02
KRT28-201ENST00000306658 SF3B3Q15393 1217 aaKnown RBP21.43■■□□□ 1.02
KRT28-201ENST00000306658 ZNF827Q17R98 1081 aa21.43■■□□□ 1.02
KRT28-201ENST00000306658 AKAP2Q9Y2D5 859 aa21.43■■□□□ 1.02
KRT28-201ENST00000306658 RIPOR2Q9Y4F9 1068 aa21.42■■□□□ 1.02
KRT28-201ENST00000306658 RILPL2Q969X0 211 aa21.41■■□□□ 1.02
KRT28-201ENST00000306658 NLRP3Q96P20 1036 aa21.41■■□□□ 1.02
KRT28-201ENST00000306658 CAMKK2Q96RR4 588 aa21.4■■□□□ 1.02
KRT28-201ENST00000306658 MPHOSPH8Q99549 860 aa21.4■■□□□ 1.02
KRT28-201ENST00000306658 TLR7Q9NYK1 1049 aaKnown RBP21.4■■□□□ 1.02
KRT28-201ENST00000306658 IGHMBP2P38935 993 aaKnown RBP21.4■■□□□ 1.02
KRT28-201ENST00000306658 ANP32AP39687 249 aaKnown RBP21.4■■□□□ 1.02
KRT28-201ENST00000306658 METTL24Q5JXM2 366 aa21.4■■□□□ 1.02
KRT28-201ENST00000306658 CNTROBQ8N137 903 aa21.4■■□□□ 1.02
KRT28-201ENST00000306658 NEUROD6Q96NK8 337 aa21.4■■□□□ 1.02
KRT28-201ENST00000306658 CDC5LQ99459 802 aaKnown RBP21.4■■□□□ 1.02
KRT28-201ENST00000306658 DBNLQ9UJU6 430 aaKnown RBP21.4■■□□□ 1.02
KRT28-201ENST00000306658 TUBGCP6Q96RT7 1819 aa21.39■■□□□ 1.02
KRT28-201ENST00000306658 EN1Q05925 392 aaPredicted RBP21.39■■□□□ 1.01
KRT28-201ENST00000306658 CNBD1Q8NA66 436 aa21.39■■□□□ 1.01
KRT28-201ENST00000306658 SEC31BQ9NQW1 1179 aa21.39■■□□□ 1.01
KRT28-201ENST00000306658 ABCC12Q96J65 1359 aa21.39■■□□□ 1.01
KRT28-201ENST00000306658 MSH5O43196 834 aa21.38■■□□□ 1.01
KRT28-201ENST00000306658 TM4SF1P30408 202 aa21.38■■□□□ 1.01
KRT28-201ENST00000306658 MFAP1P55081 439 aaKnown RBP21.38■■□□□ 1.01
KRT28-201ENST00000306658 EZH2Q15910 746 aaKnown RBP21.38■■□□□ 1.01
KRT28-201ENST00000306658 MROH5Q6ZUA9 1318 aa21.38■■□□□ 1.01
KRT28-201ENST00000306658 A0A1B0GUL7 405 aa21.37■■□□□ 1.01
KRT28-201ENST00000306658 BAG6P46379 1132 aa21.37■■□□□ 1.01
KRT28-201ENST00000306658 TIMM10P62072 90 aa21.37■■□□□ 1.01
KRT28-201ENST00000306658 COL23A1Q86Y22 540 aaPredicted RBP21.37■■□□□ 1.01
KRT28-201ENST00000306658 NLGN1Q8N2Q7 840 aa21.37■■□□□ 1.01
KRT28-201ENST00000306658 DBNDD2Q9BQY9 259 aa21.37■■□□□ 1.01
KRT28-201ENST00000306658 ATP5JP18859 108 aa21.37■■□□□ 1.01
KRT28-201ENST00000306658 ZNF609O15014 1411 aa21.37■■□□□ 1.01
KRT28-201ENST00000306658 SERPINB2P05120 415 aa21.36■■□□□ 1.01
KRT28-201ENST00000306658 C3orf67Q6ZVT6 689 aa21.36■■□□□ 1.01
KRT28-201ENST00000306658 PDE8BO95263 885 aa21.35■■□□□ 1.01
KRT28-201ENST00000306658 MAP4K4O95819 1239 aaPredicted RBP21.35■■□□□ 1.01
KRT28-201ENST00000306658 ANKRD18AQ8IVF6 992 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms