RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 ATP2B3Q16720 1220 aa19.28■□□□□ 0.68
LONRF3-201ENST00000304778 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
LONRF3-201ENST00000304778 PHF14O94880 888 aa19.28■□□□□ 0.68
LONRF3-201ENST00000304778 TMEM87AQ8NBN3 555 aa19.28■□□□□ 0.68
LONRF3-201ENST00000304778 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.28■□□□□ 0.68
LONRF3-201ENST00000304778 UBR2Q8IWV8 1755 aa19.27■□□□□ 0.68
LONRF3-201ENST00000304778 USP48Q86UV5 1035 aa19.27■□□□□ 0.68
LONRF3-201ENST00000304778 AACSQ86V21 672 aa19.27■□□□□ 0.68
LONRF3-201ENST00000304778 RASEFQ8IZ41 740 aa19.27■□□□□ 0.68
LONRF3-201ENST00000304778 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.68
LONRF3-201ENST00000304778 AK2P54819 239 aa19.27■□□□□ 0.68
LONRF3-201ENST00000304778 CWC27Q6UX04 472 aaKnown RBP19.27■□□□□ 0.68
LONRF3-201ENST00000304778 UBE3BQ7Z3V4 1068 aa19.27■□□□□ 0.68
LONRF3-201ENST00000304778 LARP6Q9BRS8 491 aaKnown RBP19.27■□□□□ 0.68
LONRF3-201ENST00000304778 ECHDC1Q9NTX5 307 aa19.27■□□□□ 0.68
LONRF3-201ENST00000304778 TTLL7Q6ZT98 887 aa19.26■□□□□ 0.67
LONRF3-201ENST00000304778 A0A087WZG4 1122 aa19.26■□□□□ 0.67
LONRF3-201ENST00000304778 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
LONRF3-201ENST00000304778 LIMCH1Q9UPQ0 1083 aa19.26■□□□□ 0.67
LONRF3-201ENST00000304778 PAPPAQ13219 1627 aa19.25■□□□□ 0.67
LONRF3-201ENST00000304778 LETM1O95202 739 aaPredicted RBP19.25■□□□□ 0.67
LONRF3-201ENST00000304778 RUFY3Q7L099 469 aa19.25■□□□□ 0.67
LONRF3-201ENST00000304778 EAF2Q96CJ1 260 aaPredicted RBP19.25■□□□□ 0.67
LONRF3-201ENST00000304778 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
LONRF3-201ENST00000304778 TMOD3Q9NYL9 352 aa19.25■□□□□ 0.67
LONRF3-201ENST00000304778 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.25■□□□□ 0.67
LONRF3-201ENST00000304778 GPATCH3Q96I76 525 aa19.24■□□□□ 0.67
LONRF3-201ENST00000304778 CCDC8Q9H0W5 538 aaPredicted RBP19.24■□□□□ 0.67
LONRF3-201ENST00000304778 TTC12Q9H892 705 aaPredicted RBP19.24■□□□□ 0.67
LONRF3-201ENST00000304778 DIAPH3Q9NSV4 1193 aa19.24■□□□□ 0.67
LONRF3-201ENST00000304778 TNS2Q63HR2 1409 aa19.24■□□□□ 0.67
LONRF3-201ENST00000304778 ZSCAN22P10073 491 aaPredicted RBP19.24■□□□□ 0.67
LONRF3-201ENST00000304778 RUFY2Q8WXA3 655 aa19.24■□□□□ 0.67
LONRF3-201ENST00000304778 TOGARAM1Q9Y4F4 1720 aa19.23■□□□□ 0.67
LONRF3-201ENST00000304778 CASP7P55210 303 aa19.23■□□□□ 0.67
LONRF3-201ENST00000304778 SPDYE4A6NLX3 237 aa19.23■□□□□ 0.67
LONRF3-201ENST00000304778 STX6O43752 255 aa19.23■□□□□ 0.67
LONRF3-201ENST00000304778 PRIMPOLQ96LW4 560 aa19.23■□□□□ 0.67
LONRF3-201ENST00000304778 CASTP20810 708 aaKnown RBP19.22■□□□□ 0.67
LONRF3-201ENST00000304778 RFX5P48382 616 aaPredicted RBP19.22■□□□□ 0.67
LONRF3-201ENST00000304778 TLR7Q9NYK1 1049 aaKnown RBP19.22■□□□□ 0.67
LONRF3-201ENST00000304778 USP25Q9UHP3 1055 aa19.22■□□□□ 0.67
LONRF3-201ENST00000304778 ROBO1Q9Y6N7 1651 aa19.22■□□□□ 0.67
LONRF3-201ENST00000304778 SYT1P21579 422 aa19.22■□□□□ 0.67
LONRF3-201ENST00000304778 RABL6Q3YEC7 729 aaPredicted RBP19.22■□□□□ 0.67
LONRF3-201ENST00000304778 ZBTB3Q9H5J0 574 aa19.22■□□□□ 0.67
LONRF3-201ENST00000304778 PLCB2Q00722 1185 aa19.21■□□□□ 0.67
LONRF3-201ENST00000304778 PIGBQ92521 554 aa19.21■□□□□ 0.67
LONRF3-201ENST00000304778 COPRSQ9NQ92 184 aa19.21■□□□□ 0.67
LONRF3-201ENST00000304778 ASAP1Q9ULH1 1129 aa19.21■□□□□ 0.67
LONRF3-201ENST00000304778 SMC3Q9UQE7 1217 aa19.21■□□□□ 0.67
LONRF3-201ENST00000304778 CNPY2Q9Y2B0 182 aa19.21■□□□□ 0.67
LONRF3-201ENST00000304778 IGSF3O75054 1194 aa19.21■□□□□ 0.67
LONRF3-201ENST00000304778 PTPN12Q05209 780 aaKnown RBP19.21■□□□□ 0.67
LONRF3-201ENST00000304778 COL15A1P39059 1388 aa19.21■□□□□ 0.67
LONRF3-201ENST00000304778 HMGN5P82970 282 aaKnown RBP19.2■□□□□ 0.66
LONRF3-201ENST00000304778 CCDC183Q5T5S1 534 aa19.2■□□□□ 0.66
LONRF3-201ENST00000304778 FAM184AQ8NB25 1140 aa19.2■□□□□ 0.66
LONRF3-201ENST00000304778 BCL11BQ9C0K0 894 aaPredicted RBP19.2■□□□□ 0.66
LONRF3-201ENST00000304778 F13A1P00488 732 aa19.2■□□□□ 0.66
LONRF3-201ENST00000304778 H7C1W4 665 aa19.2■□□□□ 0.66
LONRF3-201ENST00000304778 PTH1RQ03431 593 aa19.2■□□□□ 0.66
LONRF3-201ENST00000304778 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
LONRF3-201ENST00000304778 ATP6V1DQ9Y5K8 247 aa19.2■□□□□ 0.66
LONRF3-201ENST00000304778 LARGE1O95461 756 aa19.19■□□□□ 0.66
LONRF3-201ENST00000304778 CPA1P15085 419 aa19.19■□□□□ 0.66
LONRF3-201ENST00000304778 VPS53Q5VIR6 699 aa19.19■□□□□ 0.66
LONRF3-201ENST00000304778 KCNB2Q92953 911 aa19.19■□□□□ 0.66
LONRF3-201ENST00000304778 TM6SF1Q9BZW5 370 aa19.19■□□□□ 0.66
LONRF3-201ENST00000304778 CWC25Q9NXE8 425 aaPredicted RBP19.19■□□□□ 0.66
LONRF3-201ENST00000304778 COL14A1Q05707 1796 aaKnown RBP19.19■□□□□ 0.66
LONRF3-201ENST00000304778 GTF2F1P35269 517 aaKnown RBP eCLIP19.19■□□□□ 0.66
LONRF3-201ENST00000304778 UBE2HP62256 183 aa19.19■□□□□ 0.66
LONRF3-201ENST00000304778 KIF3AQ9Y496 699 aa19.19■□□□□ 0.66
LONRF3-201ENST00000304778 LMBR1LQ6UX01 489 aa19.18■□□□□ 0.66
LONRF3-201ENST00000304778 EVI5LQ96CN4 794 aa19.18■□□□□ 0.66
LONRF3-201ENST00000304778 JAKMIP1Q96N16 626 aaKnown RBP19.18■□□□□ 0.66
LONRF3-201ENST00000304778 NUP188Q5SRE5 1749 aa19.18■□□□□ 0.66
LONRF3-201ENST00000304778 FOXO4P98177 505 aa19.18■□□□□ 0.66
LONRF3-201ENST00000304778 NOLC1Q14978 699 aaKnown RBP eCLIP19.18■□□□□ 0.66
LONRF3-201ENST00000304778 ATG3Q9NT62 314 aa19.18■□□□□ 0.66
LONRF3-201ENST00000304778 NAP1L2Q9ULW6 460 aaPredicted RBP19.18■□□□□ 0.66
LONRF3-201ENST00000304778 DISP2A7MBM2 1401 aa19.18■□□□□ 0.66
LONRF3-201ENST00000304778 UVSSAQ2YD98 709 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 ADCK5Q3MIX3 580 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 PRPF40BQ6NWY9 871 aaKnown RBP19.17■□□□□ 0.66
LONRF3-201ENST00000304778 ZSWIM6Q9HCJ5 1215 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 PDRG1Q9NUG6 133 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 TMEM51Q9NW97 253 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 DNAJC10Q8IXB1 793 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 SH2B1Q9NRF2 756 aaPredicted RBP19.17■□□□□ 0.66
LONRF3-201ENST00000304778 CCDC171Q6TFL3 1326 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 TFCP2Q12800 502 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 ZSCAN31Q96LW9 406 aaPredicted RBP19.17■□□□□ 0.66
LONRF3-201ENST00000304778 BOLA2Q9H3K6 86 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 BCL2L12Q9HB09 334 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 ZNF330Q9Y3S2 320 aaPredicted RBP19.17■□□□□ 0.66
LONRF3-201ENST00000304778 CYP46A1Q9Y6A2 500 aa19.17■□□□□ 0.66
LONRF3-201ENST00000304778 CCDC83Q8IWF9 413 aa19.16■□□□□ 0.66
LONRF3-201ENST00000304778 PIBF1Q8WXW3 757 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms