RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 RAB3GAP1Q15042 981 aa23.99■■□□□ 1.43
LTBP3-201ENST00000301873 FKBP15Q5T1M5 1219 aa23.99■■□□□ 1.43
LTBP3-201ENST00000301873 TTC12Q9H892 705 aaPredicted RBP23.99■■□□□ 1.43
LTBP3-201ENST00000301873 MARCKSP29966 332 aaPredicted RBP23.99■■□□□ 1.43
LTBP3-201ENST00000301873 TAF4BQ92750 862 aa23.99■■□□□ 1.43
LTBP3-201ENST00000301873 UQCRFS1P1P0C7P4 283 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 RBM25P49756 843 aaKnown RBP23.98■■□□□ 1.43
LTBP3-201ENST00000301873 WTAPQ15007 396 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 CCDC186Q7Z3E2 898 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 TAX1BP1Q86VP1 789 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 RAB34Q9BZG1 259 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 ZNF518AQ6AHZ1 1483 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 UVSSAQ2YD98 709 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 ANO6Q4KMQ2 910 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 PRDM10Q9NQV6 1147 aa23.98■■□□□ 1.43
LTBP3-201ENST00000301873 CYP7A1P22680 504 aa23.97■■□□□ 1.43
LTBP3-201ENST00000301873 NPHP3Q7Z494 1330 aa23.97■■□□□ 1.43
LTBP3-201ENST00000301873 GSDMDP57764 484 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 CCDC148Q8NFR7 591 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 TCP11L1Q9NUJ3 509 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 PDE4BQ07343 736 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 DNAJC25Q9H1X3 360 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 PAG1Q9NWQ8 432 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 SBNO2Q9Y2G9 1366 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 DTNBO60941 627 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 TDRD12Q587J7 1177 aaKnown RBP23.96■■□□□ 1.43
LTBP3-201ENST00000301873 NEMFO60524 1076 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 CREB3L3Q68CJ9 461 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 FAM200AQ8TCP9 573 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 CRACR2AQ9BSW2 395 aa23.96■■□□□ 1.43
LTBP3-201ENST00000301873 CAVIN2O95810 425 aa23.95■■□□□ 1.42
LTBP3-201ENST00000301873 LDHCP07864 332 aa23.95■■□□□ 1.42
LTBP3-201ENST00000301873 HOXC9P31274 260 aa23.95■■□□□ 1.42
LTBP3-201ENST00000301873 KIF5BP33176 963 aa23.95■■□□□ 1.42
LTBP3-201ENST00000301873 IL13P35225 146 aa23.95■■□□□ 1.42
LTBP3-201ENST00000301873 MTIF2P46199 727 aaKnown RBP23.95■■□□□ 1.42
LTBP3-201ENST00000301873 ZSWIM4Q9H7M6 989 aa23.95■■□□□ 1.42
LTBP3-201ENST00000301873 IQCEQ6IPM2 695 aa23.95■■□□□ 1.42
LTBP3-201ENST00000301873 TTC41PQ6P2S7 1318 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 TIMM10P62072 90 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 KAT14Q9H8E8 782 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 TMEM266Q2M3C6 531 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 TFCP2Q12800 502 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 PPP1R12BO60237 982 aaPredicted RBP23.94■■□□□ 1.42
LTBP3-201ENST00000301873 CCDC152Q4G0S7 254 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 NBPF6Q5VWK0 638 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 NBPF5PQ86XG9 351 aaPredicted RBP23.94■■□□□ 1.42
LTBP3-201ENST00000301873 KLHDC4Q8TBB5 520 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 NBPF4Q96M43 638 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 SLC4A4Q9Y6R1 1079 aa23.94■■□□□ 1.42
LTBP3-201ENST00000301873 BAG3O95817 575 aa23.93■■□□□ 1.42
LTBP3-201ENST00000301873 AFMP43652 599 aa23.93■■□□□ 1.42
LTBP3-201ENST00000301873 COL17A1Q9UMD9 1497 aaPredicted RBP23.93■■□□□ 1.42
LTBP3-201ENST00000301873 PRC1O43663 620 aa23.93■■□□□ 1.42
LTBP3-201ENST00000301873 CASQ1P31415 396 aa23.93■■□□□ 1.42
LTBP3-201ENST00000301873 SYT1P21579 422 aa23.93■■□□□ 1.42
LTBP3-201ENST00000301873 MRPS27Q92552 414 aaKnown RBP23.93■■□□□ 1.42
LTBP3-201ENST00000301873 BICC1Q9H694 974 aaKnown RBP23.93■■□□□ 1.42
LTBP3-201ENST00000301873 DDX21Q9NR30 783 aaKnown RBP eCLIP23.93■■□□□ 1.42
LTBP3-201ENST00000301873 SSR1P43307 286 aaKnown RBP23.92■■□□□ 1.42
LTBP3-201ENST00000301873 APOBRQ0VD83 1088 aa23.92■■□□□ 1.42
LTBP3-201ENST00000301873 WWC2Q6AWC2 1192 aa23.92■■□□□ 1.42
LTBP3-201ENST00000301873 MAP3K5Q99683 1374 aa23.92■■□□□ 1.42
LTBP3-201ENST00000301873 CHL1O00533 1208 aa23.92■■□□□ 1.42
LTBP3-201ENST00000301873 N4BP3O15049 544 aa23.92■■□□□ 1.42
LTBP3-201ENST00000301873 SNW1Q13573 536 aaKnown RBP23.91■■□□□ 1.42
LTBP3-201ENST00000301873 JAKMIP3Q5VZ66 844 aa23.91■■□□□ 1.42
LTBP3-201ENST00000301873 YEATS4O95619 227 aa23.91■■□□□ 1.42
LTBP3-201ENST00000301873 GNG11P61952 73 aa23.91■■□□□ 1.42
LTBP3-201ENST00000301873 CCDC191Q8NCU4 936 aa23.91■■□□□ 1.42
LTBP3-201ENST00000301873 KCNG4Q8TDN1 519 aa23.91■■□□□ 1.42
LTBP3-201ENST00000301873 YTHDC2Q9H6S0 1430 aaKnown RBP23.91■■□□□ 1.42
LTBP3-201ENST00000301873 UBASH3AP57075 661 aa23.91■■□□□ 1.42
LTBP3-201ENST00000301873 ANKRD18AQ8IVF6 992 aa23.91■■□□□ 1.42
LTBP3-201ENST00000301873 PAF1Q8N7H5 531 aa23.91■■□□□ 1.42
LTBP3-201ENST00000301873 ESR2Q92731 530 aa23.91■■□□□ 1.42
LTBP3-201ENST00000301873 NIP7Q9Y221 180 aaKnown RBP eCLIP23.91■■□□□ 1.42
LTBP3-201ENST00000301873 LMOD1P29536 600 aaPredicted RBP23.9■■□□□ 1.42
LTBP3-201ENST00000301873 CLCN1P35523 988 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 RTN1Q16799 776 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 TSG101Q99816 390 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 WDR7Q9Y4E6 1490 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 MSH6P52701 1360 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 SKILP12757 684 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 MATR3P43243 847 aaKnown RBP eCLIP23.9■■□□□ 1.42
LTBP3-201ENST00000301873 TCERG1LQ5VWI1 586 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 IP6K1Q92551 441 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 POLR3GO15318 223 aaPredicted RBP23.9■■□□□ 1.42
LTBP3-201ENST00000301873 NBPF7P0C2Y1 421 aaPredicted RBP23.9■■□□□ 1.42
LTBP3-201ENST00000301873 ATP6V1AP38606 617 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 NOLC1Q14978 699 aaKnown RBP eCLIP23.9■■□□□ 1.42
LTBP3-201ENST00000301873 LGR6Q9HBX8 967 aa23.9■■□□□ 1.42
LTBP3-201ENST00000301873 ARHGEF12Q9NZN5 1544 aa23.89■■□□□ 1.42
LTBP3-201ENST00000301873 RNMTO43148 476 aaKnown RBP23.89■■□□□ 1.42
LTBP3-201ENST00000301873 KDM2BQ8NHM5 1336 aa23.89■■□□□ 1.42
LTBP3-201ENST00000301873 KIAA0754O94854 1291 aa23.89■■□□□ 1.41
LTBP3-201ENST00000301873 RXRAP19793 462 aa23.89■■□□□ 1.41
LTBP3-201ENST00000301873 CRNKL1Q9BZJ0 848 aaKnown RBP23.89■■□□□ 1.41
LTBP3-201ENST00000301873 GBP3Q9H0R5 595 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms