RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 MCM6Q14566 821 aa12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 SEC63Q9UGP8 760 aaKnown RBP12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 ACEP12821 1306 aa12.33□□□□□ -0.43
PKNOX1-201ENST00000291547 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.43
PKNOX1-201ENST00000291547 HSF2BPO75031 334 aa12.33□□□□□ -0.43
PKNOX1-201ENST00000291547 LARP6Q9BRS8 491 aaKnown RBP12.33□□□□□ -0.43
PKNOX1-201ENST00000291547 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 RAB34Q9BZG1 259 aa12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 MYO1BO43795 1136 aa12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 KCNA6P17658 529 aa12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 TRIM21P19474 475 aaKnown RBP12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 LTKP29376 864 aa12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 CCDC150Q8NCX0 1101 aa12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 ATRIPQ8WXE1 791 aa12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 STRN4Q9NRL3 753 aa12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 KDM5CP41229 1560 aa12.33□□□□□ -0.44
PKNOX1-201ENST00000291547 FOXO3O43524 673 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 STX6O43752 255 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 CAVIN2O95810 425 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 RASSF4Q9H2L5 321 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 PPIP5K1Q6PFW1 1433 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 KIDINS220Q9ULH0 1771 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 HMGB1P09429 215 aaKnown RBP12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 TCERG1LQ5VWI1 586 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 NAPBQ9H115 298 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 NOLC1Q14978 699 aaKnown RBP eCLIP12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 C20orf194Q5TEA3 1177 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 SPTY2D1Q68D10 685 aaPredicted RBP12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 ISM2Q6H9L7 571 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 CCDC171Q6TFL3 1326 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 ABCA6Q8N139 1617 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 IDEP14735 1019 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 CCDC40Q4G0X9 1142 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 CADPS2Q86UW7 1296 aa12.32□□□□□ -0.44
PKNOX1-201ENST00000291547 AKR1B10O60218 316 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 KCNH5Q8NCM2 988 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 CCDC194A0A1B0GVG4 234 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 TBC1D32Q96NH3 1257 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 DNAI1Q9UI46 699 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 NLRP1Q9C000 1473 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 SPHKAPQ2M3C7 1700 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 CLTCL1P53675 1640 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 UBE2HP62256 183 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 TMEM266Q2M3C6 531 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 METTL24Q5JXM2 366 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 MYCBPQ99417 103 aaPredicted RBP12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 SRRTQ9BXP5 876 aaKnown RBP12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 ASXL1Q8IXJ9 1541 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 GOLGA8BA8MQT2 603 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 FCHSD2O94868 740 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 GJB2P29033 226 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 TNIP1Q15025 636 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 PPP1R14CQ8TAE6 165 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 EFCC1Q9HA90 598 aa12.31□□□□□ -0.44
PKNOX1-201ENST00000291547 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CTAGE15A4D2H0 777 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CTAGE8P0CG41 777 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 SKILP12757 684 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CETN1Q12798 172 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CTAGE6Q86UF2 777 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CTAGE4Q8IX94 777 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 MICALL1Q8N3F8 863 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CCDC155Q8N6L0 562 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 SLC12A7Q9Y666 1083 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 RNF17Q9BXT8 1623 aaKnown RBP12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 N4BP3O15049 544 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 KIAA0753Q2KHM9 967 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 ZSCAN23Q3MJ62 389 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 GIMAP6Q6P9H5 292 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CEP57Q86XR8 500 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 SSH1Q8WYL5 1049 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 MKNK2Q9HBH9 465 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 COMMD10Q9Y6G5 202 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CEP152O94986 1710 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 IFIT1P09914 478 aaKnown RBP12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CKAP4Q07065 602 aaKnown RBP12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 NFE2L2Q16236 605 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 ZNF287Q9HBT7 754 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 HYPKQ9NX55 129 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CCDC160A6NGH7 325 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CAPN2P17655 700 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 CCDC186Q7Z3E2 898 aa12.3□□□□□ -0.44
PKNOX1-201ENST00000291547 GOLGA8AA7E2F4 631 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 IGHMBP2P38935 993 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 MSH6P52701 1360 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 A0A1W2PRG0 241 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 CCDC102BQ68D86 513 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 THUMPD2Q9BTF0 503 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 SPG7Q9UQ90 795 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 IKBKGQ9Y6K9 419 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 ABCC11Q96J66 1382 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 RARSP54136 660 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms