RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CYP2E1P05181 493 aaPredicted RBP18.75■□□□□ 0.59
SMAD6-201ENST00000288840 ANO6Q4KMQ2 910 aa18.75■□□□□ 0.59
SMAD6-201ENST00000288840 C16orf45Q96MC5 204 aaPredicted RBP18.75■□□□□ 0.59
SMAD6-201ENST00000288840 GCKRQ14397 625 aa18.75■□□□□ 0.59
SMAD6-201ENST00000288840 DNAJC25Q9H1X3 360 aa18.75■□□□□ 0.59
SMAD6-201ENST00000288840 A0A087WWV3 80 aa18.74■□□□□ 0.59
SMAD6-201ENST00000288840 ZNF165P49910 485 aa18.74■□□□□ 0.59
SMAD6-201ENST00000288840 EPHA10Q5JZY3 1008 aa18.74■□□□□ 0.59
SMAD6-201ENST00000288840 SCAND2PQ9GZW5 306 aaPredicted RBP18.74■□□□□ 0.59
SMAD6-201ENST00000288840 MTMR6Q9Y217 621 aa18.74■□□□□ 0.59
SMAD6-201ENST00000288840 LIG1P18858 919 aa18.73■□□□□ 0.59
SMAD6-201ENST00000288840 KRT32Q14532 448 aa18.73■□□□□ 0.59
SMAD6-201ENST00000288840 OTUD7BQ6GQQ9 843 aa18.73■□□□□ 0.59
SMAD6-201ENST00000288840 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.59
SMAD6-201ENST00000288840 IFT172Q9UG01 1749 aa18.73■□□□□ 0.59
SMAD6-201ENST00000288840 OVOS2A0A0J9YW53 1432 aa18.72■□□□□ 0.59
SMAD6-201ENST00000288840 OVOS2Q6IE36 1432 aa18.72■□□□□ 0.59
SMAD6-201ENST00000288840 NCOA3Q9Y6Q9 1424 aa18.72■□□□□ 0.59
SMAD6-201ENST00000288840 SMC2O95347 1197 aa18.72■□□□□ 0.59
SMAD6-201ENST00000288840 NEURL1BA8MQ27 555 aa18.72■□□□□ 0.59
SMAD6-201ENST00000288840 POLA2Q14181 598 aa18.72■□□□□ 0.59
SMAD6-201ENST00000288840 CCDC186Q7Z3E2 898 aa18.72■□□□□ 0.59
SMAD6-201ENST00000288840 ADAMTS13Q76LX8 1427 aa18.72■□□□□ 0.59
SMAD6-201ENST00000288840 RGS12O14924 1447 aa18.71■□□□□ 0.59
SMAD6-201ENST00000288840 HSPA2P54652 639 aa18.71■□□□□ 0.59
SMAD6-201ENST00000288840 TRMT1Q9NXH9 659 aaKnown RBP18.71■□□□□ 0.59
SMAD6-201ENST00000288840 NRDCO43847 1150 aa18.71■□□□□ 0.59
SMAD6-201ENST00000288840 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
SMAD6-201ENST00000288840 TAF6LQ9Y6J9 622 aa18.71■□□□□ 0.59
SMAD6-201ENST00000288840 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
SMAD6-201ENST00000288840 RXRAP19793 462 aa18.71■□□□□ 0.59
SMAD6-201ENST00000288840 GTF2E1P29083 439 aaPredicted RBP18.71■□□□□ 0.59
SMAD6-201ENST00000288840 TTC6Q86TZ1 520 aa18.71■□□□□ 0.59
SMAD6-201ENST00000288840 PTPRUQ92729 1446 aa18.71■□□□□ 0.59
SMAD6-201ENST00000288840 PTGS1P23219 599 aa18.7■□□□□ 0.58
SMAD6-201ENST00000288840 TYRO3Q06418 890 aa18.7■□□□□ 0.58
SMAD6-201ENST00000288840 MCMDC2Q4G0Z9 681 aa18.7■□□□□ 0.58
SMAD6-201ENST00000288840 METTL24Q5JXM2 366 aa18.7■□□□□ 0.58
SMAD6-201ENST00000288840 ARHGEF25Q86VW2 580 aa18.7■□□□□ 0.58
SMAD6-201ENST00000288840 CFAP45Q9UL16 551 aa18.7■□□□□ 0.58
SMAD6-201ENST00000288840 U3KPZ7 1027 aaPredicted RBP18.7■□□□□ 0.58
SMAD6-201ENST00000288840 RPS6KB1P23443 525 aa18.7■□□□□ 0.58
SMAD6-201ENST00000288840 METTL22Q9BUU2 404 aaPredicted RBP18.7■□□□□ 0.58
SMAD6-201ENST00000288840 SLC52A2Q9HAB3 445 aa18.7■□□□□ 0.58
SMAD6-201ENST00000288840 CWC25Q9NXE8 425 aaPredicted RBP18.7■□□□□ 0.58
SMAD6-201ENST00000288840 CEP170BQ9Y4F5 1589 aaPredicted RBP18.69■□□□□ 0.58
SMAD6-201ENST00000288840 AOX1Q06278 1338 aa18.69■□□□□ 0.58
SMAD6-201ENST00000288840 BABAM1Q9NWV8 329 aa18.69■□□□□ 0.58
SMAD6-201ENST00000288840 DBNLQ9UJU6 430 aaKnown RBP18.69■□□□□ 0.58
SMAD6-201ENST00000288840 MTMR7Q9Y216 660 aa18.69■□□□□ 0.58
SMAD6-201ENST00000288840 CDC42BPGQ6DT37 1551 aa18.69■□□□□ 0.58
SMAD6-201ENST00000288840 TTLL7Q6ZT98 887 aa18.69■□□□□ 0.58
SMAD6-201ENST00000288840 FAM89AQ96GI7 184 aa18.69■□□□□ 0.58
SMAD6-201ENST00000288840 USP32Q8NFA0 1604 aa18.69■□□□□ 0.58
SMAD6-201ENST00000288840 HOXB7P09629 217 aa18.69■□□□□ 0.58
SMAD6-201ENST00000288840 IGKV5-2P06315 115 aa18.68■□□□□ 0.58
SMAD6-201ENST00000288840 CCAR1Q8IX12 1150 aaKnown RBP18.68■□□□□ 0.58
SMAD6-201ENST00000288840 FSIP1Q8NA03 581 aa18.68■□□□□ 0.58
SMAD6-201ENST00000288840 HELBQ8NG08 1087 aaPredicted RBP18.68■□□□□ 0.58
SMAD6-201ENST00000288840 ZMYND15Q9H091 742 aa18.68■□□□□ 0.58
SMAD6-201ENST00000288840 ZSWIM6Q9HCJ5 1215 aa18.68■□□□□ 0.58
SMAD6-201ENST00000288840 USP31Q70CQ4 1352 aa18.68■□□□□ 0.58
SMAD6-201ENST00000288840 TTLL5Q6EMB2 1281 aa18.68■□□□□ 0.58
SMAD6-201ENST00000288840 KIF6Q6ZMV9 814 aa18.68■□□□□ 0.58
SMAD6-201ENST00000288840 FTOQ9C0B1 505 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMAD6-201ENST00000288840 PAG1Q9NWQ8 432 aa18.68■□□□□ 0.58
SMAD6-201ENST00000288840 CLIP2Q9UDT6 1046 aa18.67■□□□□ 0.58
SMAD6-201ENST00000288840 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.67■□□□□ 0.58
SMAD6-201ENST00000288840 CBX1P83916 185 aa18.67■□□□□ 0.58
SMAD6-201ENST00000288840 HSP90AA4PQ58FG1 418 aa18.67■□□□□ 0.58
SMAD6-201ENST00000288840 CPLX2Q6PUV4 134 aaKnown RBP18.67■□□□□ 0.58
SMAD6-201ENST00000288840 HOMER1Q86YM7 354 aa18.67■□□□□ 0.58
SMAD6-201ENST00000288840 TRIM29Q14134 588 aa18.67■□□□□ 0.58
SMAD6-201ENST00000288840 LRRFIP1Q32MZ4 808 aaKnown RBP18.67■□□□□ 0.58
SMAD6-201ENST00000288840 GOLGA8BA8MQT2 603 aa18.66■□□□□ 0.58
SMAD6-201ENST00000288840 FAM177A1Q8N128 213 aaPredicted RBP18.66■□□□□ 0.58
SMAD6-201ENST00000288840 ADCY9O60503 1353 aa18.66■□□□□ 0.58
SMAD6-201ENST00000288840 ZNF396Q96N95 335 aaPredicted RBP18.66■□□□□ 0.58
SMAD6-201ENST00000288840 LDHAL6AQ6ZMR3 332 aa18.66■□□□□ 0.58
SMAD6-201ENST00000288840 PIBF1Q8WXW3 757 aa18.66■□□□□ 0.58
SMAD6-201ENST00000288840 TPM4P67936 248 aa18.65■□□□□ 0.58
SMAD6-201ENST00000288840 CLEC17AQ6ZS10 378 aa18.65■□□□□ 0.58
SMAD6-201ENST00000288840 IQSEC3Q9UPP2 1182 aaPredicted RBP18.65■□□□□ 0.58
SMAD6-201ENST00000288840 NPHP3Q7Z494 1330 aa18.65■□□□□ 0.58
SMAD6-201ENST00000288840 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
SMAD6-201ENST00000288840 LRRC24Q50LG9 513 aa18.65■□□□□ 0.58
SMAD6-201ENST00000288840 FAM200AQ8TCP9 573 aa18.65■□□□□ 0.58
SMAD6-201ENST00000288840 PTPDC1A2A3K4 754 aa18.65■□□□□ 0.58
SMAD6-201ENST00000288840 IMMTQ16891 758 aaKnown RBP18.65■□□□□ 0.58
SMAD6-201ENST00000288840 CCAR2Q8N163 923 aaKnown RBP18.65■□□□□ 0.58
SMAD6-201ENST00000288840 MAP4K1Q92918 833 aa18.65■□□□□ 0.58
SMAD6-201ENST00000288840 C8orf76Q96K31 380 aa18.65■□□□□ 0.58
SMAD6-201ENST00000288840 IFIT5Q13325 482 aaKnown RBP18.64■□□□□ 0.58
SMAD6-201ENST00000288840 MICU3Q86XE3 530 aa18.64■□□□□ 0.58
SMAD6-201ENST00000288840 KDRP35968 1356 aa18.64■□□□□ 0.57
SMAD6-201ENST00000288840 NUP133Q8WUM0 1156 aa18.64■□□□□ 0.57
SMAD6-201ENST00000288840 C19orf44Q9H6X5 657 aa18.64■□□□□ 0.57
SMAD6-201ENST00000288840 HMG20BQ9P0W2 317 aa18.64■□□□□ 0.57
SMAD6-201ENST00000288840 A0A1B0GUL7 405 aa18.64■□□□□ 0.57
SMAD6-201ENST00000288840 NR1I2O75469 434 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms