RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 PLEKHG3A1L390 1219 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 ESR2Q92731 530 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 ZBTB43O43298 467 aa13.06□□□□□ -0.32
USP6NL-201ENST00000277575 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
USP6NL-201ENST00000277575 SFPQP23246 707 aaKnown RBP eCLIP13.06□□□□□ -0.32
USP6NL-201ENST00000277575 ZGPATQ8N5A5 531 aaKnown RBP13.06□□□□□ -0.32
USP6NL-201ENST00000277575 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
USP6NL-201ENST00000277575 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
USP6NL-201ENST00000277575 WDR78Q5VTH9 848 aa13.06□□□□□ -0.32
USP6NL-201ENST00000277575 NYXQ9GZU5 481 aa13.06□□□□□ -0.32
USP6NL-201ENST00000277575 PBRM1Q86U86 1689 aa13.06□□□□□ -0.32
USP6NL-201ENST00000277575 LTKP29376 864 aa13.06□□□□□ -0.32
USP6NL-201ENST00000277575 PANK2Q9BZ23 570 aa13.06□□□□□ -0.32
USP6NL-201ENST00000277575 KRT23Q9C075 422 aa13.06□□□□□ -0.32
USP6NL-201ENST00000277575 LGR6Q9HBX8 967 aa13.06□□□□□ -0.32
USP6NL-201ENST00000277575 ZBTB7BO15156 539 aaPredicted RBP13.05□□□□□ -0.32
USP6NL-201ENST00000277575 CCDC181Q5TID7 509 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 TMTC2Q8N394 836 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
USP6NL-201ENST00000277575 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
USP6NL-201ENST00000277575 HOXB7P09629 217 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
USP6NL-201ENST00000277575 MTERF4Q7Z6M4 381 aaKnown RBP13.05□□□□□ -0.32
USP6NL-201ENST00000277575 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 CFAP65Q6ZU64 1925 aaKnown RBP13.05□□□□□ -0.32
USP6NL-201ENST00000277575 UBA7P41226 1012 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
USP6NL-201ENST00000277575 ARHGAP29Q52LW3 1261 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 BICC1Q9H694 974 aaKnown RBP13.05□□□□□ -0.32
USP6NL-201ENST00000277575 TCP11L1Q9NUJ3 509 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 NEO1Q92859 1461 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 PTPRTO14522 1441 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 PLEKHM2Q8IWE5 1019 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 CNNM2Q9H8M5 875 aa13.05□□□□□ -0.32
USP6NL-201ENST00000277575 MATR3P43243 847 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP6NL-201ENST00000277575 TFCP2Q12800 502 aa13.04□□□□□ -0.32
USP6NL-201ENST00000277575 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
USP6NL-201ENST00000277575 F8W031 263 aaPredicted RBP13.04□□□□□ -0.32
USP6NL-201ENST00000277575 FAM89AQ96GI7 184 aa13.04□□□□□ -0.32
USP6NL-201ENST00000277575 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
USP6NL-201ENST00000277575 SAMD9Q5K651 1589 aa13.04□□□□□ -0.32
USP6NL-201ENST00000277575 MAP7D2Q96T17 732 aa13.04□□□□□ -0.32
USP6NL-201ENST00000277575 UBA5Q9GZZ9 404 aa13.04□□□□□ -0.32
USP6NL-201ENST00000277575 TFCP2L1Q9NZI6 479 aa13.04□□□□□ -0.32
USP6NL-201ENST00000277575 BIN1O00499 593 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 RBM25P49756 843 aaKnown RBP13.03□□□□□ -0.32
USP6NL-201ENST00000277575 PAF1Q8N7H5 531 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 IDEP14735 1019 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 CDCA7Q9BWT1 371 aaPredicted RBP13.03□□□□□ -0.32
USP6NL-201ENST00000277575 NBPF7P0C2Y1 421 aaPredicted RBP13.03□□□□□ -0.32
USP6NL-201ENST00000277575 ZSCAN22P10073 491 aaPredicted RBP13.03□□□□□ -0.32
USP6NL-201ENST00000277575 UBE2HP62256 183 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 C8orf34Q49A92 452 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 WDHD1O75717 1129 aaPredicted RBP13.03□□□□□ -0.32
USP6NL-201ENST00000277575 TSPY3P0CV98 308 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 TSPY8P0CW00 308 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 PLBD2Q8NHP8 589 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 USP25Q9UHP3 1055 aa13.03□□□□□ -0.32
USP6NL-201ENST00000277575 IFIT1BQ5T764 474 aaKnown RBP13.02□□□□□ -0.32
USP6NL-201ENST00000277575 Q6ZUG5 572 aa13.02□□□□□ -0.32
USP6NL-201ENST00000277575 KIAA1328Q86T90 577 aa13.02□□□□□ -0.32
USP6NL-201ENST00000277575 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.32
USP6NL-201ENST00000277575 RNF113AO15541 343 aaKnown RBP13.02□□□□□ -0.33
USP6NL-201ENST00000277575 MYO1BO43795 1136 aa13.02□□□□□ -0.33
USP6NL-201ENST00000277575 SETQ01105 290 aaPredicted RBP13.02□□□□□ -0.33
USP6NL-201ENST00000277575 RTN1Q16799 776 aa13.02□□□□□ -0.33
USP6NL-201ENST00000277575 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.33
USP6NL-201ENST00000277575 OGFOD1Q8N543 542 aa13.02□□□□□ -0.33
USP6NL-201ENST00000277575 TSG101Q99816 390 aa13.02□□□□□ -0.33
USP6NL-201ENST00000277575 ALG1Q9BT22 464 aa13.02□□□□□ -0.33
USP6NL-201ENST00000277575 FKBP15Q5T1M5 1219 aa13.02□□□□□ -0.33
USP6NL-201ENST00000277575 KIF20AO95235 890 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 TOP1P11387 765 aaKnown RBP13.01□□□□□ -0.33
USP6NL-201ENST00000277575 ZNF165P49910 485 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 CCDC102BQ68D86 513 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 DDX17Q92841 729 aaKnown RBP13.01□□□□□ -0.33
USP6NL-201ENST00000277575 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
USP6NL-201ENST00000277575 GNPATO15228 680 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 A1BGP04217 495 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 TIMM10P62072 90 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 ZNF804AQ7Z570 1209 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 CALML4Q96GE6 196 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 SH3TC1Q8TE82 1336 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 PRC1O43663 620 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 CHMLP26374 656 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 SKIDA1Q1XH10 827 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 KLHL40Q2TBA0 621 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 MAGI3Q5TCQ9 1506 aa13.01□□□□□ -0.33
USP6NL-201ENST00000277575 EYA2O00167 538 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 ERLIN2O94905 339 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 GNAQP50148 359 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 CCDC178Q5BJE1 867 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 YEATS2Q9ULM3 1422 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 MAGEB6P1A0A0J9YX57 407 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
USP6NL-201ENST00000277575 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms