RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 EPC1Q9H2F5 836 aa18.49■□□□□ 0.55
CTDSP1-201ENST00000273062 A0A1B0GUL7 405 aa18.49■□□□□ 0.55
CTDSP1-201ENST00000273062 LIG1P18858 919 aa18.49■□□□□ 0.55
CTDSP1-201ENST00000273062 MSH6P52701 1360 aa18.48■□□□□ 0.55
CTDSP1-201ENST00000273062 F13A1P00488 732 aa18.48■□□□□ 0.55
CTDSP1-201ENST00000273062 LMAN1P49257 510 aa18.48■□□□□ 0.55
CTDSP1-201ENST00000273062 IL17REQ8NFR9 667 aa18.48■□□□□ 0.55
CTDSP1-201ENST00000273062 SETD1BQ9UPS6 1966 aaKnown RBP18.48■□□□□ 0.55
CTDSP1-201ENST00000273062 LTN1O94822 1766 aa18.48■□□□□ 0.55
CTDSP1-201ENST00000273062 F6X3S4 739 aa18.48■□□□□ 0.55
CTDSP1-201ENST00000273062 STX6O43752 255 aa18.48■□□□□ 0.55
CTDSP1-201ENST00000273062 CCAR2Q8N163 923 aaKnown RBP18.48■□□□□ 0.55
CTDSP1-201ENST00000273062 GNAT3A8MTJ3 354 aa18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 PATL2C9JE40 543 aaKnown RBP18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 GORABQ5T7V8 394 aa18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 NBPF6Q5VWK0 638 aa18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 NBPF4Q96M43 638 aa18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 BCCIPQ9P287 314 aaKnown RBP eCLIP18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 CCZ1BP86790 482 aa18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 CCZ1P86791 482 aaPredicted RBP18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 MAP3K11Q16584 847 aa18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 TMCO3Q6UWJ1 677 aa18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 GOLGA5Q8TBA6 731 aa18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
CTDSP1-201ENST00000273062 USP54Q70EL1 1684 aa18.46■□□□□ 0.55
CTDSP1-201ENST00000273062 L2HGDHQ9H9P8 463 aa18.46■□□□□ 0.55
CTDSP1-201ENST00000273062 USP16Q9Y5T5 823 aa18.46■□□□□ 0.55
CTDSP1-201ENST00000273062 NFAT5O94916 1531 aa18.46■□□□□ 0.55
CTDSP1-201ENST00000273062 MEIS3Q99687 375 aa18.46■□□□□ 0.55
CTDSP1-201ENST00000273062 ANO2Q9NQ90 1003 aa18.46■□□□□ 0.55
CTDSP1-201ENST00000273062 CWC15Q9P013 229 aaKnown RBP18.46■□□□□ 0.55
CTDSP1-201ENST00000273062 CASTP20810 708 aaKnown RBP18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 FAM212AQ96EL1 285 aa18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 DNAJC25Q9H1X3 360 aa18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 TBC1D8O95759 1140 aa18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 CCDC93Q567U6 631 aa18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 RNF20Q5VTR2 975 aa18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 FILIP1Q7Z7B0 1213 aa18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 GOLGA6L1Q8N7Z2 621 aa18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 CXorf56Q9H5V9 222 aa18.45■□□□□ 0.54
CTDSP1-201ENST00000273062 GPS2Q13227 327 aa18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 SLC4A10Q6U841 1118 aa18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 IP6K1Q92551 441 aa18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 NUP62CLQ9H1M0 184 aa18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 KIF24Q5T7B8 1368 aa18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 MAP3K5Q99683 1374 aa18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 CCDC69A6NI79 296 aa18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 SMC1AQ14683 1233 aaKnown RBP18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 TDRD7Q8NHU6 1098 aaKnown RBP18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 ORC3Q9UBD5 711 aaPredicted RBP18.44■□□□□ 0.54
CTDSP1-201ENST00000273062 ESYT1Q9BSJ8 1104 aa18.43■□□□□ 0.54
CTDSP1-201ENST00000273062 ADAM21Q9UKJ8 722 aa18.43■□□□□ 0.54
CTDSP1-201ENST00000273062 IL25Q9H293 177 aa18.43■□□□□ 0.54
CTDSP1-201ENST00000273062 ATP10DQ9P241 1426 aa18.43■□□□□ 0.54
CTDSP1-201ENST00000273062 MAGEA9P43362 315 aa18.42■□□□□ 0.54
CTDSP1-201ENST00000273062 FAM173BQ6P4H8 233 aa18.42■□□□□ 0.54
CTDSP1-201ENST00000273062 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.42■□□□□ 0.545e-7■■■□□ 16
CTDSP1-201ENST00000273062 LRRC37A3O60309 1634 aa18.42■□□□□ 0.54
CTDSP1-201ENST00000273062 EIF3CLB5ME19 914 aaKnown RBP18.42■□□□□ 0.54
CTDSP1-201ENST00000273062 PROSER2Q86WR7 435 aaPredicted RBP18.42■□□□□ 0.54
CTDSP1-201ENST00000273062 EIF3CQ99613 913 aaKnown RBP18.42■□□□□ 0.54
CTDSP1-201ENST00000273062 ZNF165P49910 485 aa18.41■□□□□ 0.54
CTDSP1-201ENST00000273062 TTC6Q86TZ1 520 aa18.41■□□□□ 0.54
CTDSP1-201ENST00000273062 DACT1Q9NYF0 836 aa18.41■□□□□ 0.54
CTDSP1-201ENST00000273062 H3BQF6 201 aa18.41■□□□□ 0.54
CTDSP1-201ENST00000273062 DDX17Q92841 729 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-201ENST00000273062 RGPD2P0DJD1 1756 aa18.41■□□□□ 0.54
CTDSP1-201ENST00000273062 ACTN2P35609 894 aa18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 HAP1P54257 671 aaPredicted RBP18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 SNW1Q13573 536 aaKnown RBP18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 DEF6Q9H4E7 631 aa18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 LGR6Q9HBX8 967 aa18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 DONSONQ9NYP3 566 aa18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 SUFUQ9UMX1 484 aa18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 GCP02774 474 aa18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 CEP85Q6P2H3 762 aa18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 TNMDQ9H2S6 317 aa18.4■□□□□ 0.54
CTDSP1-201ENST00000273062 LARGE1O95461 756 aa18.39■□□□□ 0.54
CTDSP1-201ENST00000273062 E4F1Q66K89 784 aaPredicted RBP18.39■□□□□ 0.54
CTDSP1-201ENST00000273062 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-201ENST00000273062 MTMR6Q9Y217 621 aa18.39■□□□□ 0.53
CTDSP1-201ENST00000273062 UBXN4Q92575 508 aa18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 A0A087WWV3 80 aa18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 FANCGO15287 622 aa18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 MCCP23508 829 aa18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 PDE1AP54750 535 aa18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 GSCP56915 257 aaPredicted RBP18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 EGFL6Q8IUX8 553 aa18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 ANKRD44Q8N8A2 993 aa18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 IQUBQ8NA54 791 aa18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 PDRG1Q9NUG6 133 aa18.38■□□□□ 0.53
CTDSP1-201ENST00000273062 TAF7Q15545 349 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-201ENST00000273062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTDSP1-201ENST00000273062 PPP1R13BQ96KQ4 1090 aa18.37■□□□□ 0.53
CTDSP1-201ENST00000273062 AK7Q96M32 723 aa18.37■□□□□ 0.53
CTDSP1-201ENST00000273062 ARGLU1Q9NWB6 273 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-201ENST00000273062 AXIN2Q9Y2T1 843 aa18.37■□□□□ 0.53
CTDSP1-201ENST00000273062 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms