RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 ANKARQ7Z5J8 1434 aa20.03■□□□□ 0.8
RTN1-201ENST00000267484 A0A087WWV3 80 aa20.03■□□□□ 0.8
RTN1-201ENST00000267484 SLFNL1Q499Z3 407 aa20.03■□□□□ 0.8
RTN1-201ENST00000267484 DNAJC25Q9H1X3 360 aa20.03■□□□□ 0.8
RTN1-201ENST00000267484 COL15A1P39059 1388 aa20.03■□□□□ 0.8
RTN1-201ENST00000267484 RNF20Q5VTR2 975 aa20.03■□□□□ 0.8
RTN1-201ENST00000267484 TRIM5Q9C035 493 aa20.02■□□□□ 0.8
RTN1-201ENST00000267484 GTF2F1P35269 517 aaKnown RBP eCLIP20.02■□□□□ 0.8
RTN1-201ENST00000267484 PDIA6Q15084 440 aa20.02■□□□□ 0.8
RTN1-201ENST00000267484 PPP4R3BQ5MIZ7 849 aa20.02■□□□□ 0.8
RTN1-201ENST00000267484 DNAJC2Q99543 621 aaKnown RBP20.02■□□□□ 0.8
RTN1-201ENST00000267484 TAF5LO75529 589 aa20.02■□□□□ 0.79
RTN1-201ENST00000267484 PDCP20941 246 aa20.02■□□□□ 0.79
RTN1-201ENST00000267484 BRF1Q92994 677 aa20.02■□□□□ 0.79
RTN1-201ENST00000267484 FTOQ9C0B1 505 aaKnown RBP eCLIP20.02■□□□□ 0.79
RTN1-201ENST00000267484 PRDM4Q9UKN5 801 aa20.02■□□□□ 0.79
RTN1-201ENST00000267484 HIP1O00291 1037 aa20.01■□□□□ 0.79
RTN1-201ENST00000267484 HSP90B1P14625 803 aaKnown RBP20.01■□□□□ 0.79
RTN1-201ENST00000267484 MYD88Q99836 296 aa20.01■□□□□ 0.79
RTN1-201ENST00000267484 AXIN2Q9Y2T1 843 aa20.01■□□□□ 0.79
RTN1-201ENST00000267484 ATP2B3Q16720 1220 aa20.01■□□□□ 0.79
RTN1-201ENST00000267484 C16orf45Q96MC5 204 aaPredicted RBP20.01■□□□□ 0.79
RTN1-201ENST00000267484 ARHGAP23Q9P227 1491 aa20.01■□□□□ 0.79
RTN1-201ENST00000267484 SPDYE4A6NLX3 237 aa20.01■□□□□ 0.79
RTN1-201ENST00000267484 ANKRD24Q8TF21 1146 aa20.01■□□□□ 0.79
RTN1-201ENST00000267484 MED23Q9ULK4 1368 aa20■□□□□ 0.79
RTN1-201ENST00000267484 GOLGA6L6A8MZA4 724 aa20■□□□□ 0.79
RTN1-201ENST00000267484 ELP1O95163 1332 aa20■□□□□ 0.79
RTN1-201ENST00000267484 CHMP4AQ9BY43 222 aa20■□□□□ 0.79
RTN1-201ENST00000267484 SCAND2PQ9GZW5 306 aaPredicted RBP20■□□□□ 0.79
RTN1-201ENST00000267484 DBNLQ9UJU6 430 aaKnown RBP20■□□□□ 0.79
RTN1-201ENST00000267484 Q6ZUG5 572 aa19.99■□□□□ 0.79
RTN1-201ENST00000267484 XAGE3Q8WTP9 111 aa19.99■□□□□ 0.79
RTN1-201ENST00000267484 DDX21Q9NR30 783 aaKnown RBP eCLIP19.99■□□□□ 0.79
RTN1-201ENST00000267484 SLIT1O75093 1534 aa19.99■□□□□ 0.79
RTN1-201ENST00000267484 GCP02774 474 aa19.99■□□□□ 0.79
RTN1-201ENST00000267484 DDX58O95786 925 aaKnown RBP19.99■□□□□ 0.79
RTN1-201ENST00000267484 TFCP2Q12800 502 aa19.99■□□□□ 0.79
RTN1-201ENST00000267484 ANKRD1Q15327 319 aa19.99■□□□□ 0.79
RTN1-201ENST00000267484 COPS6Q7L5N1 327 aa19.99■□□□□ 0.79
RTN1-201ENST00000267484 ZNF165P49910 485 aa19.98■□□□□ 0.79
RTN1-201ENST00000267484 AMOTQ4VCS5 1084 aa19.98■□□□□ 0.79
RTN1-201ENST00000267484 ORAI2Q96SN7 254 aa19.98■□□□□ 0.79
RTN1-201ENST00000267484 CLSTN2Q9H4D0 955 aa19.98■□□□□ 0.79
RTN1-201ENST00000267484 NFAT5O94916 1531 aa19.98■□□□□ 0.79
RTN1-201ENST00000267484 NPHP3Q7Z494 1330 aa19.98■□□□□ 0.79
RTN1-201ENST00000267484 NEURL1BA8MQ27 555 aa19.98■□□□□ 0.79
RTN1-201ENST00000267484 DDX46Q7L014 1031 aaKnown RBP19.98■□□□□ 0.79
RTN1-201ENST00000267484 CHAF1AQ13111 956 aaPredicted RBP19.98■□□□□ 0.79
RTN1-201ENST00000267484 NEK1Q96PY6 1258 aa19.98■□□□□ 0.79
RTN1-201ENST00000267484 KIF13AQ9H1H9 1805 aa19.97■□□□□ 0.79
RTN1-201ENST00000267484 H3BQV1 296 aa19.97■□□□□ 0.79
RTN1-201ENST00000267484 IFFO2Q5TF58 517 aa19.97■□□□□ 0.79
RTN1-201ENST00000267484 FBXW7Q969H0 707 aa19.97■□□□□ 0.79
RTN1-201ENST00000267484 ZNF75DP51815 510 aa19.97■□□□□ 0.79
RTN1-201ENST00000267484 ERCC4Q92889 916 aaPredicted RBP19.97■□□□□ 0.79
RTN1-201ENST00000267484 GTF3C6Q969F1 213 aa19.97■□□□□ 0.79
RTN1-201ENST00000267484 ZHX1Q9UKY1 873 aaPredicted RBP19.97■□□□□ 0.79
RTN1-201ENST00000267484 ATP5J2-PTCD1G3V325 749 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 PTCD1O75127 700 aaKnown RBP19.96■□□□□ 0.79
RTN1-201ENST00000267484 GCKRQ14397 625 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 ARID5BQ14865 1188 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 CCDC144BQ3MJ40 725 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 CCDC144CPQ8IYA2 1237 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 KCNH5Q8NCM2 988 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 DBNDD2Q9BQY9 259 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 SNRKQ9NRH2 765 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 A0A0G2JLW4 131 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 CYP21A2P08686 494 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 FGD1P98174 961 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 RESTQ13127 1097 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 NAA30Q147X3 362 aaPredicted RBP19.96■□□□□ 0.79
RTN1-201ENST00000267484 DDX19AQ9NUU7 478 aaKnown RBP19.96■□□□□ 0.79
RTN1-201ENST00000267484 NAP1L2Q9ULW6 460 aaPredicted RBP19.96■□□□□ 0.79
RTN1-201ENST00000267484 HDAC5Q9UQL6 1122 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 UTYO14607 1347 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 HEG1Q9ULI3 1381 aa19.96■□□□□ 0.79
RTN1-201ENST00000267484 U2AF2P26368 475 aaKnown RBP eCLIP19.95■□□□□ 0.78
RTN1-201ENST00000267484 NEXNQ0ZGT2 675 aa19.95■□□□□ 0.78
RTN1-201ENST00000267484 SCRN1Q12765 414 aa19.95■□□□□ 0.78
RTN1-201ENST00000267484 ZSCAN25Q6NSZ9 544 aa19.95■□□□□ 0.78
RTN1-201ENST00000267484 UBE3BQ7Z3V4 1068 aa19.95■□□□□ 0.78
RTN1-201ENST00000267484 TPM3P06753 285 aa19.95■□□□□ 0.78
RTN1-201ENST00000267484 ARHGEF25Q86VW2 580 aa19.95■□□□□ 0.78
RTN1-201ENST00000267484 SMAP1Q8IYB5 467 aaPredicted RBP19.95■□□□□ 0.78
RTN1-201ENST00000267484 PDCL2Q8N4E4 241 aa19.95■□□□□ 0.78
RTN1-201ENST00000267484 GUCY1B3Q02153 619 aa19.94■□□□□ 0.78
RTN1-201ENST00000267484 TNNI3KQ59H18 835 aa19.94■□□□□ 0.78
RTN1-201ENST00000267484 C11orf57Q6ZUT1 292 aaPredicted RBP19.94■□□□□ 0.78
RTN1-201ENST00000267484 STOX1Q6ZVD7 989 aa19.94■□□□□ 0.78
RTN1-201ENST00000267484 NFATC2IPQ8NCF5 419 aa19.94■□□□□ 0.78
RTN1-201ENST00000267484 CACTINQ8WUQ7 758 aaKnown RBP19.94■□□□□ 0.78
RTN1-201ENST00000267484 FPGT-TNNI3KV9GXZ4 949 aa19.94■□□□□ 0.78
RTN1-201ENST00000267484 CCT2P78371 535 aaKnown RBP19.94■□□□□ 0.78
RTN1-201ENST00000267484 CLIP2Q9UDT6 1046 aa19.94■□□□□ 0.78
RTN1-201ENST00000267484 ZNF609O15014 1411 aa19.93■□□□□ 0.78
RTN1-201ENST00000267484 PLA2G4DQ86XP0 818 aa19.93■□□□□ 0.78
RTN1-201ENST00000267484 HMG20BQ9P0W2 317 aa19.93■□□□□ 0.78
RTN1-201ENST00000267484 USP16Q9Y5T5 823 aa19.93■□□□□ 0.78
RTN1-201ENST00000267484 ZC3H6P61129 1189 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms