RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SLU7O95391 586 aaKnown RBP13.83□□□□□ -0.2
SMG6-201ENST00000263073 MAP3K12Q12852 859 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 NAA15Q9BXJ9 866 aaKnown RBP13.83□□□□□ -0.2
SMG6-201ENST00000263073 PRXQ9BXM0 1461 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 VGLL3A8MV65 326 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 ESYT1Q9BSJ8 1104 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 CATIPQ7Z7H3 387 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 IQCA1Q86XH1 822 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 ZNF444Q8N0Y2 327 aaPredicted RBP13.83□□□□□ -0.2
SMG6-201ENST00000263073 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 RBM8AQ9Y5S9 174 aaKnown RBP13.83□□□□□ -0.2
SMG6-201ENST00000263073 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
SMG6-201ENST00000263073 RAB3GAP1Q15042 981 aa13.82□□□□□ -0.2
SMG6-201ENST00000263073 POTEJP0CG39 1038 aa13.82□□□□□ -0.2
SMG6-201ENST00000263073 CRACR2BQ8N4Y2 399 aaPredicted RBP13.82□□□□□ -0.2
SMG6-201ENST00000263073 SBNO2Q9Y2G9 1366 aa13.82□□□□□ -0.2
SMG6-201ENST00000263073 AKR1B10O60218 316 aa13.82□□□□□ -0.2
SMG6-201ENST00000263073 FAM160A1Q05DH4 1040 aa13.82□□□□□ -0.2
SMG6-201ENST00000263073 SCLT1Q96NL6 688 aa13.82□□□□□ -0.2
SMG6-201ENST00000263073 TRMT112Q9UI30 125 aaKnown RBP13.82□□□□□ -0.2
SMG6-201ENST00000263073 CAVIN4Q5BKX8 364 aa13.82□□□□□ -0.2
SMG6-201ENST00000263073 PDE1AP54750 535 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 TMEM266Q2M3C6 531 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 UBE3BQ7Z3V4 1068 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 URB2Q14146 1524 aaKnown RBP13.81□□□□□ -0.2
SMG6-201ENST00000263073 CETN2P41208 172 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 IFNKQ9P0W0 207 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 HOOK3Q86VS8 718 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 RHPN1Q8TCX5 695 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
SMG6-201ENST00000263073 TMEM110-MUSTN1A8MSY1 372 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 RXRAP19793 462 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 TSC1Q92574 1164 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 SELENOSQ9BQE4 189 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 PHAXQ9H814 394 aaKnown RBP13.81□□□□□ -0.2
SMG6-201ENST00000263073 GUCA1BQ9UMX6 200 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 ALG1Q9BT22 464 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 PA2G4Q9UQ80 394 aaKnown RBP13.81□□□□□ -0.2
SMG6-201ENST00000263073 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
SMG6-201ENST00000263073 GOLGA6L9A6NEM1 432 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 AK2P54819 239 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 KRBA2Q6ZNG9 492 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 DHX58Q96C10 678 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 IQSEC3Q9UPP2 1182 aaPredicted RBP13.8□□□□□ -0.2
SMG6-201ENST00000263073 HSPA4P34932 840 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 PHF23Q9BUL5 403 aaPredicted RBP13.8□□□□□ -0.2
SMG6-201ENST00000263073 PTPRCP08575 1304 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 ZNF569Q5MCW4 686 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 IFT81Q8WYA0 676 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 CCDC61Q9Y6R9 512 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 A0A1W2PRG0 241 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 UBA7P41226 1012 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 SPECC1LQ69YQ0 1117 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 CALML4Q96GE6 196 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 PLIN2Q99541 437 aa13.8□□□□□ -0.2
SMG6-201ENST00000263073 UTP14AQ9BVJ6 771 aaKnown RBP13.8□□□□□ -0.2
SMG6-201ENST00000263073 FGFR1OPO95684 399 aaKnown RBP13.79□□□□□ -0.2
SMG6-201ENST00000263073 SF3A3Q12874 501 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMG6-201ENST00000263073 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
SMG6-201ENST00000263073 GPIHBP1Q8IV16 184 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 NCOA7Q8NI08 942 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
SMG6-201ENST00000263073 IQGAP2Q13576 1575 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 GJC1P36383 396 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 MSL1Q68DK7 614 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 GIGYF2Q6Y7W6 1299 aaKnown RBP13.79□□□□□ -0.2
SMG6-201ENST00000263073 C8orf58Q8NAV2 365 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 GOLGA1Q92805 767 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 TCP11L1Q9NUJ3 509 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 MFSD6Q6ZSS7 791 aa13.79□□□□□ -0.2
SMG6-201ENST00000263073 STARD3NLO95772 234 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 TTC31Q49AM3 519 aaPredicted RBP13.78□□□□□ -0.2
SMG6-201ENST00000263073 EXOC1Q9NV70 894 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 ABCC11Q96J66 1382 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 CTAGE9A4FU28 777 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 SLC5A1P13866 664 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 NMIQ13287 307 aaPredicted RBP13.78□□□□□ -0.2
SMG6-201ENST00000263073 FBF1Q8TES7 1133 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 ZSCAN16Q9H4T2 348 aaPredicted RBP13.78□□□□□ -0.2
SMG6-201ENST00000263073 TSPY2A6NKD2 308 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
SMG6-201ENST00000263073 MAP3K1Q13233 1512 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 CCDC160A6NGH7 325 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 DESP17661 470 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 TAOK3Q9H2K8 898 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 HOMER2Q9NSB8 354 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 CHPF2Q9P2E5 772 aa13.78□□□□□ -0.2
SMG6-201ENST00000263073 KRT13P13646 458 aa13.77□□□□□ -0.2
SMG6-201ENST00000263073 TMOD3Q9NYL9 352 aa13.77□□□□□ -0.2
SMG6-201ENST00000263073 FSD2A1L4K1 749 aa13.77□□□□□ -0.2
SMG6-201ENST00000263073 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.2
SMG6-201ENST00000263073 KIAA0753Q2KHM9 967 aa13.77□□□□□ -0.2
SMG6-201ENST00000263073 SYCP3Q8IZU3 236 aa13.77□□□□□ -0.2
SMG6-201ENST00000263073 GTPBP4Q9BZE4 634 aaKnown RBP13.77□□□□□ -0.2
SMG6-201ENST00000263073 DBF4Q9UBU7 674 aaPredicted RBP13.77□□□□□ -0.2
SMG6-201ENST00000263073 FAM170AA1A519 330 aa13.77□□□□□ -0.21
SMG6-201ENST00000263073 STAT6P42226 847 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms