RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 SIL1Q9H173 461 aa10.27□□□□□ -0.76
LRP1-201ENST00000243077 ALDH1L1O75891 902 aa10.27□□□□□ -0.77
LRP1-201ENST00000243077 GABPB2Q8TAK5 448 aaPredicted RBP10.27□□□□□ -0.77
LRP1-201ENST00000243077 BOLA2Q9H3K6 86 aa10.27□□□□□ -0.77
LRP1-201ENST00000243077 CNGA4Q8IV77 575 aa10.27□□□□□ -0.77
LRP1-201ENST00000243077 ORC3Q9UBD5 711 aaPredicted RBP10.27□□□□□ -0.77
LRP1-201ENST00000243077 SLU7O95391 586 aaKnown RBP10.27□□□□□ -0.77
LRP1-201ENST00000243077 CFAP58Q5T655 872 aa10.27□□□□□ -0.77
LRP1-201ENST00000243077 C16orf45Q96MC5 204 aaPredicted RBP10.27□□□□□ -0.77
LRP1-201ENST00000243077 NUP58Q9BVL2 599 aa10.27□□□□□ -0.77
LRP1-201ENST00000243077 CCDC113Q9H0I3 377 aa10.27□□□□□ -0.77
LRP1-201ENST00000243077 JADE2Q9NQC1 790 aa10.27□□□□□ -0.77
LRP1-201ENST00000243077 FEZ2Q9UHY8 353 aaPredicted RBP10.27□□□□□ -0.77
LRP1-201ENST00000243077 TTC41PQ6P2S7 1318 aa10.27□□□□□ -0.77
LRP1-201ENST00000243077 APBB1IPQ7Z5R6 666 aaPredicted RBP10.27□□□□□ -0.77
LRP1-201ENST00000243077 MAP3K9P80192 1104 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 MKRN1Q9UHC7 482 aaKnown RBP10.26□□□□□ -0.77
LRP1-201ENST00000243077 FAM135AQ9P2D6 1515 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 INSRP06213 1382 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 TRIM27P14373 513 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 SNX16P57768 344 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 GOPCQ9HD26 462 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 CWC25Q9NXE8 425 aaPredicted RBP10.26□□□□□ -0.77
LRP1-201ENST00000243077 AKR1B10O60218 316 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 CBX1P83916 185 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 MSL1Q68DK7 614 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 PPP1R14CQ8TAE6 165 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 MTRF1LQ9UGC7 380 aaKnown RBP10.26□□□□□ -0.77
LRP1-201ENST00000243077 SSX2IPQ9Y2D8 614 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 TMEM67Q5HYA8 995 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 POTEDQ86YR6 584 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 ESR2Q92731 530 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 PIK3R4Q99570 1358 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 METAP2P50579 478 aaKnown RBP eCLIP10.26□□□□□ -0.77
LRP1-201ENST00000243077 GPR161Q8N6U8 529 aaKnown RBP10.26□□□□□ -0.77
LRP1-201ENST00000243077 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 NUDT16Q96DE0 195 aaKnown RBP10.26□□□□□ -0.77
LRP1-201ENST00000243077 RSRC1Q96IZ7 334 aaKnown RBP10.26□□□□□ -0.77
LRP1-201ENST00000243077 TSKSQ9UJT2 592 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 PLCG2P16885 1265 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 ANAPC4Q9UJX5 808 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 MTUS1Q9ULD2 1270 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 IFT140Q96RY7 1462 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 NCOA1Q15788 1441 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 MCMDC2Q4G0Z9 681 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 CYB5RLQ6IPT4 315 aa10.26□□□□□ -0.77
LRP1-201ENST00000243077 SYCP3Q8IZU3 236 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 SMC6Q96SB8 1091 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 TRIM7Q9C029 511 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 GOLGA8AA7E2F4 631 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 MYL6BP14649 208 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 CCDC40Q4G0X9 1142 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 SETDB1Q15047 1291 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 ZSCAN29Q8IWY8 852 aaPredicted RBP10.25□□□□□ -0.77
LRP1-201ENST00000243077 GNA11P29992 359 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 RUSC2Q8N2Y8 1516 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 PABPN1LA6NDY0 278 aaKnown RBP10.25□□□□□ -0.77
LRP1-201ENST00000243077 RBM5P52756 815 aaKnown RBP eCLIP10.25□□□□□ -0.773e-6■■■■□ 20.1
LRP1-201ENST00000243077 AFAP1Q8N556 730 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 TBCAO75347 108 aaKnown RBP10.25□□□□□ -0.77
LRP1-201ENST00000243077 KRT13P13646 458 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 NUCKS1Q9H1E3 243 aaKnown RBP10.25□□□□□ -0.77
LRP1-201ENST00000243077 GJB2P29033 226 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 SPATS2Q86XZ4 545 aaKnown RBP10.25□□□□□ -0.77
LRP1-201ENST00000243077 TDRD12Q587J7 1177 aaKnown RBP10.25□□□□□ -0.77
LRP1-201ENST00000243077 CCDC42Q96M95 316 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 NSD3Q9BZ95 1437 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 ARHGAP25P42331 645 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 MAATS1Q7Z4T9 603 aa10.25□□□□□ -0.77
LRP1-201ENST00000243077 SMAP1Q8IYB5 467 aaPredicted RBP10.25□□□□□ -0.77
LRP1-201ENST00000243077 UTP14AQ9BVJ6 771 aaKnown RBP10.25□□□□□ -0.77
LRP1-201ENST00000243077 SF3B2Q13435 895 aaKnown RBP10.25□□□□□ -0.77
LRP1-201ENST00000243077 A0A1B0GUA9 196 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 NCBP1Q09161 790 aaKnown RBP10.24□□□□□ -0.77
LRP1-201ENST00000243077 CRNKL1Q9BZJ0 848 aaKnown RBP10.24□□□□□ -0.77
LRP1-201ENST00000243077 CAMSAP2Q08AD1 1489 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 SNRPA1P09661 255 aaKnown RBP10.24□□□□□ -0.77
LRP1-201ENST00000243077 UBE4AQ14139 1066 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 RPGRIP1Q96KN7 1286 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 IL1RAPL2Q9NP60 686 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 EXOC6BQ9Y2D4 811 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 CFTRP13569 1480 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 HLA-DOAP06340 250 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 RAB3GAP1Q15042 981 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 TMOD3Q9NYL9 352 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 IQCGQ9H095 443 aaKnown RBP10.24□□□□□ -0.77
LRP1-201ENST00000243077 ZBTB43O43298 467 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 PPFIA3O75145 1194 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 KDM4AO75164 1064 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 FLIIQ13045 1269 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 NPHP3Q7Z494 1330 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 CCDC96Q2M329 555 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 CCDC6Q16204 474 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 RUFY4Q6ZNE9 571 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 DDX23Q9BUQ8 820 aaKnown RBP10.24□□□□□ -0.77
LRP1-201ENST00000243077 BCAP29Q9UHQ4 241 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 GTF2F1P35269 517 aaKnown RBP eCLIP10.24□□□□□ -0.778e-7■■■■■ 31.7
LRP1-201ENST00000243077 ZMYM3Q14202 1370 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 GAS8O95995 478 aa10.24□□□□□ -0.77
LRP1-201ENST00000243077 RTN1Q16799 776 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms