RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 COL24A1Q17RW2 1714 aa13.84□□□□□ -0.19
CTSC-201ENST00000227266 CSF1RP07333 972 aa13.84□□□□□ -0.19
CTSC-201ENST00000227266 GREM2Q9H772 168 aa13.84□□□□□ -0.19
CTSC-201ENST00000227266 POLA2Q14181 598 aa13.83□□□□□ -0.2
CTSC-201ENST00000227266 CCDC152Q4G0S7 254 aa13.83□□□□□ -0.2
CTSC-201ENST00000227266 SSH3Q8TE77 659 aa13.83□□□□□ -0.2
CTSC-201ENST00000227266 SOCS7O14512 581 aa13.82□□□□□ -0.2
CTSC-201ENST00000227266 POLD1P28340 1107 aa13.82□□□□□ -0.2
CTSC-201ENST00000227266 CCDC57Q2TAC2 916 aa13.82□□□□□ -0.2
CTSC-201ENST00000227266 KLHDC4Q8TBB5 520 aa13.82□□□□□ -0.2
CTSC-201ENST00000227266 ITGA6P23229 1130 aa13.82□□□□□ -0.2
CTSC-201ENST00000227266 IFIT5Q13325 482 aaKnown RBP13.82□□□□□ -0.2
CTSC-201ENST00000227266 PA2G4Q9UQ80 394 aaKnown RBP13.82□□□□□ -0.2
CTSC-201ENST00000227266 SF3B3Q15393 1217 aaKnown RBP13.81□□□□□ -0.2
CTSC-201ENST00000227266 TAF7LQ5H9L4 462 aa13.81□□□□□ -0.2
CTSC-201ENST00000227266 BRIP1Q9BX63 1249 aa13.81□□□□□ -0.2
CTSC-201ENST00000227266 SIL1Q9H173 461 aa13.81□□□□□ -0.2
CTSC-201ENST00000227266 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
CTSC-201ENST00000227266 APBB1O00213 710 aa13.8□□□□□ -0.2
CTSC-201ENST00000227266 SURF6O75683 361 aaKnown RBP13.8□□□□□ -0.2
CTSC-201ENST00000227266 RFX5P48382 616 aaPredicted RBP13.8□□□□□ -0.2
CTSC-201ENST00000227266 ZNF594Q96JF6 807 aaPredicted RBP13.8□□□□□ -0.2
CTSC-201ENST00000227266 SEC31BQ9NQW1 1179 aa13.8□□□□□ -0.2
CTSC-201ENST00000227266 EXOC6BQ9Y2D4 811 aa13.8□□□□□ -0.2
CTSC-201ENST00000227266 RBM19Q9Y4C8 960 aaKnown RBP13.8□□□□□ -0.2
CTSC-201ENST00000227266 CASZ1Q86V15 1759 aa13.8□□□□□ -0.2
CTSC-201ENST00000227266 CENPQQ7L2Z9 268 aaPredicted RBP13.8□□□□□ -0.2
CTSC-201ENST00000227266 DCTPP1Q9H773 170 aa13.8□□□□□ -0.2
CTSC-201ENST00000227266 KDM2BQ8NHM5 1336 aa13.79□□□□□ -0.2
CTSC-201ENST00000227266 PDE6BP35913 854 aa13.79□□□□□ -0.2
CTSC-201ENST00000227266 PTPN12Q05209 780 aaKnown RBP13.79□□□□□ -0.2
CTSC-201ENST00000227266 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
CTSC-201ENST00000227266 RPGRQ92834 1020 aaKnown RBP13.79□□□□□ -0.2
CTSC-201ENST00000227266 BCL11AQ9H165 835 aa13.79□□□□□ -0.2
CTSC-201ENST00000227266 RIC1Q4ADV7 1423 aa13.78□□□□□ -0.2
CTSC-201ENST00000227266 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
CTSC-201ENST00000227266 GCC1Q96CN9 775 aa13.78□□□□□ -0.2
CTSC-201ENST00000227266 COPRSQ9NQ92 184 aa13.78□□□□□ -0.2
CTSC-201ENST00000227266 CRY2Q49AN0 593 aa13.78□□□□□ -0.2
CTSC-201ENST00000227266 ANP32EQ9BTT0 268 aa13.78□□□□□ -0.2
CTSC-201ENST00000227266 DDX60Q8IY21 1712 aaKnown RBP13.77□□□□□ -0.2
CTSC-201ENST00000227266 G3BP1Q13283 466 aaKnown RBP eCLIP13.77□□□□□ -0.21
CTSC-201ENST00000227266 SMC5Q8IY18 1101 aa13.77□□□□□ -0.21
CTSC-201ENST00000227266 CDC5LQ99459 802 aaKnown RBP13.77□□□□□ -0.21
CTSC-201ENST00000227266 SPON1Q9HCB6 807 aa13.77□□□□□ -0.21
CTSC-201ENST00000227266 PPP1R1BQ9UD71 204 aaPredicted RBP13.77□□□□□ -0.21
CTSC-201ENST00000227266 RTL9Q8NET4 1388 aa13.77□□□□□ -0.21
CTSC-201ENST00000227266 TNRC6CQ9HCJ0 1690 aaKnown RBP13.76□□□□□ -0.21
CTSC-201ENST00000227266 KLRG2A4D1S0 409 aaPredicted RBP13.76□□□□□ -0.21
CTSC-201ENST00000227266 IGHMBP2P38935 993 aaKnown RBP13.76□□□□□ -0.21
CTSC-201ENST00000227266 PTGER2P43116 358 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 HSP90AB4PQ58FF6 505 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 LDHAL6AQ6ZMR3 332 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 C2CD5Q86YS7 1000 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 SGIP1Q9BQI5 828 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 PUS3Q9BZE2 481 aaKnown RBP13.76□□□□□ -0.21
CTSC-201ENST00000227266 NOP58Q9Y2X3 529 aaKnown RBP13.76□□□□□ -0.21
CTSC-201ENST00000227266 SRCAPQ6ZRS2 3230 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 LRRC24Q50LG9 513 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 ANKRD18AQ8IVF6 992 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 CELF1Q92879 486 aaKnown RBP13.76□□□□□ -0.21
CTSC-201ENST00000227266 RBM17Q96I25 401 aaKnown RBP13.76□□□□□ -0.21
CTSC-201ENST00000227266 MPHOSPH8Q99549 860 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 CNNM1Q9NRU3 951 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
CTSC-201ENST00000227266 H0YIN7 160 aa13.75□□□□□ -0.21
CTSC-201ENST00000227266 EYA2O00167 538 aa13.75□□□□□ -0.21
CTSC-201ENST00000227266 SRGNP10124 158 aa13.75□□□□□ -0.21
CTSC-201ENST00000227266 CHRNA5P30532 468 aa13.75□□□□□ -0.21
CTSC-201ENST00000227266 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
CTSC-201ENST00000227266 LAMB2P55268 1798 aa13.75□□□□□ -0.21
CTSC-201ENST00000227266 C10orf71Q711Q0 1435 aa13.75□□□□□ -0.21
CTSC-201ENST00000227266 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
CTSC-201ENST00000227266 RAB11FIP3O75154 756 aa13.74□□□□□ -0.21
CTSC-201ENST00000227266 NPR1P16066 1061 aa13.74□□□□□ -0.21
CTSC-201ENST00000227266 RPS8P62241 208 aaKnown RBP13.74□□□□□ -0.21
CTSC-201ENST00000227266 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTSC-201ENST00000227266 HOXA10P31260 410 aaPredicted RBP13.74□□□□□ -0.21
CTSC-201ENST00000227266 GRAPQ13588 217 aa13.74□□□□□ -0.21
CTSC-201ENST00000227266 ATG9AQ7Z3C6 839 aa13.74□□□□□ -0.21
CTSC-201ENST00000227266 ERC1Q8IUD2 1116 aa13.74□□□□□ -0.21
CTSC-201ENST00000227266 GRAPLQ8TC17 118 aaPredicted RBP13.74□□□□□ -0.21
CTSC-201ENST00000227266 RHPN1Q8TCX5 695 aa13.74□□□□□ -0.21
CTSC-201ENST00000227266 MASTLQ96GX5 879 aa13.74□□□□□ -0.21
CTSC-201ENST00000227266 LRRCC1Q9C099 1032 aa13.74□□□□□ -0.21
CTSC-201ENST00000227266 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
CTSC-201ENST00000227266 CIAO1O76071 339 aa13.73□□□□□ -0.21
CTSC-201ENST00000227266 IL15P40933 162 aaPredicted RBP13.73□□□□□ -0.21
CTSC-201ENST00000227266 NUCB1Q02818 461 aa13.73□□□□□ -0.21
CTSC-201ENST00000227266 KIF1BPQ96EK5 621 aa13.73□□□□□ -0.21
CTSC-201ENST00000227266 LNPKQ9C0E8 428 aa13.73□□□□□ -0.21
CTSC-201ENST00000227266 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
CTSC-201ENST00000227266 SASH1O94885 1247 aa13.72□□□□□ -0.21
CTSC-201ENST00000227266 TFCP2Q12800 502 aa13.72□□□□□ -0.21
CTSC-201ENST00000227266 CHD1LQ86WJ1 897 aa13.72□□□□□ -0.21
CTSC-201ENST00000227266 SKAP1Q86WV1 359 aa13.72□□□□□ -0.21
CTSC-201ENST00000227266 CRAMP1Q96RY5 1269 aa13.72□□□□□ -0.21
CTSC-201ENST00000227266 BSDC1Q9NW68 430 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms