RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 TSPOAP1O95153 1857 aa16.64■□□□□ 0.26
SHPK-201ENST00000225519 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.25
SHPK-201ENST00000225519 TPM4P67936 248 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 SARM1Q6SZW1 724 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 RBM43Q6ZSC3 357 aaKnown RBP16.64■□□□□ 0.25
SHPK-201ENST00000225519 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
SHPK-201ENST00000225519 CPS1P31327 1500 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 CCZ1BP86790 482 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 CCZ1P86791 482 aaPredicted RBP16.64■□□□□ 0.25
SHPK-201ENST00000225519 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 PI4KAP2A4QPH2 592 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 RPS6KB1P23443 525 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 GNL2Q13823 731 aaKnown RBP16.64■□□□□ 0.25
SHPK-201ENST00000225519 PI4KAP1Q8N8J0 262 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
SHPK-201ENST00000225519 BOLA2Q9H3K6 86 aa16.64■□□□□ 0.25
SHPK-201ENST00000225519 CLCN6P51797 869 aa16.63■□□□□ 0.25
SHPK-201ENST00000225519 CREBRFQ8IUR6 639 aa16.63■□□□□ 0.25
SHPK-201ENST00000225519 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
SHPK-201ENST00000225519 MAP3K5Q99683 1374 aa16.63■□□□□ 0.25
SHPK-201ENST00000225519 SIGLEC1Q9BZZ2 1709 aa16.63■□□□□ 0.25
SHPK-201ENST00000225519 FSIP1Q8NA03 581 aa16.63■□□□□ 0.25
SHPK-201ENST00000225519 DNAAF4Q8WXU2 420 aa16.63■□□□□ 0.25
SHPK-201ENST00000225519 ANXA1P04083 346 aa16.63■□□□□ 0.25
SHPK-201ENST00000225519 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
SHPK-201ENST00000225519 GPS2Q13227 327 aa16.62■□□□□ 0.25
SHPK-201ENST00000225519 ZNF446Q9NWS9 450 aa16.62■□□□□ 0.25
SHPK-201ENST00000225519 URI1O94763 535 aaPredicted RBP16.62■□□□□ 0.25
SHPK-201ENST00000225519 SF3A1Q15459 793 aaKnown RBP16.62■□□□□ 0.25
SHPK-201ENST00000225519 NEK11Q8NG66 645 aa16.62■□□□□ 0.25
SHPK-201ENST00000225519 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
SHPK-201ENST00000225519 PPFIA3O75145 1194 aa16.62■□□□□ 0.25
SHPK-201ENST00000225519 G3BP1Q13283 466 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHPK-201ENST00000225519 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
SHPK-201ENST00000225519 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
SHPK-201ENST00000225519 TSPYL1Q9H0U9 437 aa16.62■□□□□ 0.25
SHPK-201ENST00000225519 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
SHPK-201ENST00000225519 ERC1Q8IUD2 1116 aa16.61■□□□□ 0.25
SHPK-201ENST00000225519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHPK-201ENST00000225519 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
SHPK-201ENST00000225519 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
SHPK-201ENST00000225519 EYA1Q99502 592 aa16.61■□□□□ 0.25
SHPK-201ENST00000225519 ACEP12821 1306 aa16.61■□□□□ 0.25
SHPK-201ENST00000225519 CYP2C19P33261 490 aa16.61■□□□□ 0.25
SHPK-201ENST00000225519 FAM193AP78312 1265 aa16.61■□□□□ 0.25
SHPK-201ENST00000225519 LRRC2Q9BYS8 371 aa16.61■□□□□ 0.25
SHPK-201ENST00000225519 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHPK-201ENST00000225519 GUCY1B3Q02153 619 aa16.6■□□□□ 0.25
SHPK-201ENST00000225519 PPP1R13BQ96KQ4 1090 aa16.6■□□□□ 0.25
SHPK-201ENST00000225519 SIL1Q9H173 461 aa16.6■□□□□ 0.25
SHPK-201ENST00000225519 IFNKQ9P0W0 207 aa16.6■□□□□ 0.25
SHPK-201ENST00000225519 RESTQ13127 1097 aa16.6■□□□□ 0.25
SHPK-201ENST00000225519 CCDC150Q8NCX0 1101 aa16.6■□□□□ 0.25
SHPK-201ENST00000225519 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
SHPK-201ENST00000225519 ZNF396Q96N95 335 aaPredicted RBP16.59■□□□□ 0.25
SHPK-201ENST00000225519 BIN1O00499 593 aa16.59■□□□□ 0.25
SHPK-201ENST00000225519 TOB2Q14106 344 aaPredicted RBP16.59■□□□□ 0.25
SHPK-201ENST00000225519 TAF6LQ9Y6J9 622 aa16.59■□□□□ 0.25
SHPK-201ENST00000225519 LRRN4CLQ8ND94 238 aa16.59■□□□□ 0.25
SHPK-201ENST00000225519 CHPF2Q9P2E5 772 aa16.59■□□□□ 0.25
SHPK-201ENST00000225519 TAOK2Q9UL54 1235 aa16.59■□□□□ 0.25
SHPK-201ENST00000225519 Q6ZUG5 572 aa16.58■□□□□ 0.25
SHPK-201ENST00000225519 H2AFXP16104 143 aaPredicted RBP16.58■□□□□ 0.24
SHPK-201ENST00000225519 TXLNBQ8N3L3 684 aa16.58■□□□□ 0.24
SHPK-201ENST00000225519 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
SHPK-201ENST00000225519 XPO4Q9C0E2 1151 aaKnown RBP16.58■□□□□ 0.24
SHPK-201ENST00000225519 FHOD1Q9Y613 1164 aa16.58■□□□□ 0.24
SHPK-201ENST00000225519 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.24
SHPK-201ENST00000225519 FAM160A1Q05DH4 1040 aa16.57■□□□□ 0.24
SHPK-201ENST00000225519 KRT32Q14532 448 aa16.57■□□□□ 0.24
SHPK-201ENST00000225519 E4F1Q66K89 784 aaPredicted RBP16.57■□□□□ 0.24
SHPK-201ENST00000225519 DHX40Q8IX18 779 aaKnown RBP16.57■□□□□ 0.24
SHPK-201ENST00000225519 KCNB2Q92953 911 aa16.57■□□□□ 0.24
SHPK-201ENST00000225519 CAPN2P17655 700 aa16.57■□□□□ 0.24
SHPK-201ENST00000225519 HMG20BQ9P0W2 317 aa16.57■□□□□ 0.24
SHPK-201ENST00000225519 KRBA2Q6ZNG9 492 aa16.57■□□□□ 0.24
SHPK-201ENST00000225519 GOLPH3LQ9H4A5 285 aa16.57■□□□□ 0.24
SHPK-201ENST00000225519 PRR36Q9H6K5 1346 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 SEC31AO94979 1220 aaKnown RBP16.56■□□□□ 0.24
SHPK-201ENST00000225519 IMPACTQ9P2X3 320 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 CCP110O43303 1012 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 NUTM2GQ5VZR2 741 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 IL17REQ8NFR9 667 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 CCDC34Q96HJ3 373 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 CARD6Q9BX69 1037 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.56■□□□□ 0.24
SHPK-201ENST00000225519 RAD51AP2Q09MP3 1159 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
SHPK-201ENST00000225519 USP28Q96RU2 1077 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 HDAC5Q9UQL6 1122 aa16.56■□□□□ 0.24
SHPK-201ENST00000225519 PLA2G4AP47712 749 aa16.55■□□□□ 0.24
SHPK-201ENST00000225519 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
SHPK-201ENST00000225519 FAM53CQ9NYF3 392 aa16.55■□□□□ 0.24
SHPK-201ENST00000225519 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
SHPK-201ENST00000225519 L2HGDHQ9H9P8 463 aa16.55■□□□□ 0.24
SHPK-201ENST00000225519 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
SHPK-201ENST00000225519 A0A1B0GVL5 298 aa16.55■□□□□ 0.24
SHPK-201ENST00000225519 ETF1P62495 437 aaKnown RBP16.55■□□□□ 0.24
SHPK-201ENST00000225519 STK38Q15208 465 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms