RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 BLOC1S2Q6QNY1 142 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 DDX21Q9NR30 783 aaKnown RBP eCLIP20.56■□□□□ 0.88
USB1-201ENST00000219281 CHMP3Q9Y3E7 222 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 TAF6LQ9Y6J9 622 aa20.56■□□□□ 0.88
USB1-201ENST00000219281 KRT85P78386 507 aa20.55■□□□□ 0.88
USB1-201ENST00000219281 PDIA6Q15084 440 aa20.55■□□□□ 0.88
USB1-201ENST00000219281 TTC6Q86TZ1 520 aa20.55■□□□□ 0.88
USB1-201ENST00000219281 MAP7D2Q96T17 732 aa20.55■□□□□ 0.88
USB1-201ENST00000219281 SNRKQ9NRH2 765 aa20.55■□□□□ 0.88
USB1-201ENST00000219281 SLAIN2Q9P270 581 aa20.55■□□□□ 0.88
USB1-201ENST00000219281 IGKV5-2P06315 115 aa20.55■□□□□ 0.88
USB1-201ENST00000219281 RNF20Q5VTR2 975 aa20.55■□□□□ 0.88
USB1-201ENST00000219281 RIC3Q7Z5B4 369 aa20.55■□□□□ 0.88
USB1-201ENST00000219281 IFNL2Q8IZJ0 200 aa20.54■□□□□ 0.88
USB1-201ENST00000219281 KLHL34Q8N239 644 aa20.54■□□□□ 0.88
USB1-201ENST00000219281 RPS6KB1P23443 525 aa20.53■□□□□ 0.88
USB1-201ENST00000219281 CCDC192P0DO97 292 aa20.53■□□□□ 0.88
USB1-201ENST00000219281 ANKRD1Q15327 319 aa20.53■□□□□ 0.88
USB1-201ENST00000219281 ZNF589Q86UQ0 364 aaPredicted RBP20.53■□□□□ 0.88
USB1-201ENST00000219281 SOS2Q07890 1332 aaPredicted RBP20.53■□□□□ 0.88
USB1-201ENST00000219281 TOB2Q14106 344 aaPredicted RBP20.52■□□□□ 0.88
USB1-201ENST00000219281 MYL6BP14649 208 aa20.52■□□□□ 0.88
USB1-201ENST00000219281 LIG1P18858 919 aa20.52■□□□□ 0.88
USB1-201ENST00000219281 PDCP20941 246 aa20.52■□□□□ 0.88
USB1-201ENST00000219281 STK3Q13188 491 aa20.52■□□□□ 0.88
USB1-201ENST00000219281 CAMK4Q16566 473 aa20.52■□□□□ 0.88
USB1-201ENST00000219281 MYRIPQ8NFW9 859 aa20.52■□□□□ 0.88
USB1-201ENST00000219281 EDC3Q96F86 508 aaKnown RBP20.52■□□□□ 0.88
USB1-201ENST00000219281 ZMYND15Q9H091 742 aa20.51■□□□□ 0.87
USB1-201ENST00000219281 MED23Q9ULK4 1368 aa20.51■□□□□ 0.87
USB1-201ENST00000219281 PDIA4P13667 645 aaKnown RBP20.51■□□□□ 0.87
USB1-201ENST00000219281 EPHA10Q5JZY3 1008 aa20.51■□□□□ 0.87
USB1-201ENST00000219281 LARP1Q6PKG0 1096 aaKnown RBP20.51■□□□□ 0.87
USB1-201ENST00000219281 NEURL1BA8MQ27 555 aa20.5■□□□□ 0.87
USB1-201ENST00000219281 SPC24Q8NBT2 197 aa20.5■□□□□ 0.87
USB1-201ENST00000219281 NUP62CLQ9H1M0 184 aa20.5■□□□□ 0.87
USB1-201ENST00000219281 ALDH8A1Q9H2A2 487 aaPredicted RBP20.5■□□□□ 0.87
USB1-201ENST00000219281 NEXNQ0ZGT2 675 aa20.5■□□□□ 0.87
USB1-201ENST00000219281 MAP3K11Q16584 847 aa20.5■□□□□ 0.87
USB1-201ENST00000219281 ZNF496Q96IT1 587 aaPredicted RBP20.5■□□□□ 0.87
USB1-201ENST00000219281 DCAF5Q96JK2 942 aa20.5■□□□□ 0.87
USB1-201ENST00000219281 MYD88Q99836 296 aa20.5■□□□□ 0.87
USB1-201ENST00000219281 SPTLC3Q9NUV7 552 aa20.5■□□□□ 0.87
USB1-201ENST00000219281 TFIP11Q9UBB9 837 aaKnown RBP20.5■□□□□ 0.87
USB1-201ENST00000219281 SCN11AQ9UI33 1791 aa20.49■□□□□ 0.87
USB1-201ENST00000219281 ELP1O95163 1332 aa20.49■□□□□ 0.87
USB1-201ENST00000219281 ABCC6O95255 1503 aa20.49■□□□□ 0.87
USB1-201ENST00000219281 GCKRQ14397 625 aa20.49■□□□□ 0.87
USB1-201ENST00000219281 XAGE3Q8WTP9 111 aa20.49■□□□□ 0.87
USB1-201ENST00000219281 JARID2Q92833 1246 aaPredicted RBP20.49■□□□□ 0.87
USB1-201ENST00000219281 TAF5LO75529 589 aa20.48■□□□□ 0.87
USB1-201ENST00000219281 PRIMPOLQ96LW4 560 aa20.48■□□□□ 0.87
USB1-201ENST00000219281 KCNF1Q9H3M0 494 aa20.48■□□□□ 0.87
USB1-201ENST00000219281 HMG20BQ9P0W2 317 aa20.48■□□□□ 0.87
USB1-201ENST00000219281 GOLGA6L4A6NEF3 574 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 TYRO3Q06418 890 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 FAM200AQ8TCP9 573 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 SPATA32Q96LK8 384 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 ARID3AQ99856 593 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 PRDM11Q9NQV5 511 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 MRVI1Q9Y6F6 885 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 TSGA10IPQ3SY00 556 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 MTERF4Q7Z6M4 381 aaKnown RBP20.47■□□□□ 0.87
USB1-201ENST00000219281 CKAP2LQ8IYA6 745 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 SCAND2PQ9GZW5 306 aaPredicted RBP20.47■□□□□ 0.87
USB1-201ENST00000219281 DACT1Q9NYF0 836 aa20.47■□□□□ 0.87
USB1-201ENST00000219281 TNMDQ9H2S6 317 aa20.46■□□□□ 0.87
USB1-201ENST00000219281 PYCARDQ9ULZ3 195 aa20.46■□□□□ 0.87
USB1-201ENST00000219281 USP16Q9Y5T5 823 aa20.46■□□□□ 0.87
USB1-201ENST00000219281 NDUFB9Q9Y6M9 179 aa20.46■□□□□ 0.87
USB1-201ENST00000219281 PLEKHG2Q9H7P9 1386 aa20.46■□□□□ 0.87
USB1-201ENST00000219281 JCADQ9P266 1359 aa20.46■□□□□ 0.87
USB1-201ENST00000219281 TSC1Q92574 1164 aa20.46■□□□□ 0.87
USB1-201ENST00000219281 METTL22Q9BUU2 404 aaPredicted RBP20.46■□□□□ 0.87
USB1-201ENST00000219281 TPM3P06753 285 aa20.45■□□□□ 0.86
USB1-201ENST00000219281 HMGN5P82970 282 aaKnown RBP20.45■□□□□ 0.86
USB1-201ENST00000219281 LUZP1Q86V48 1076 aa20.45■□□□□ 0.86
USB1-201ENST00000219281 KIAA1524Q8TCG1 905 aa20.45■□□□□ 0.86
USB1-201ENST00000219281 LEO1Q8WVC0 666 aaPredicted RBP20.45■□□□□ 0.86
USB1-201ENST00000219281 DBNLQ9UJU6 430 aaKnown RBP20.45■□□□□ 0.86
USB1-201ENST00000219281 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
USB1-201ENST00000219281 JAK2O60674 1132 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 ATP5JP18859 108 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 TFCP2Q12800 502 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 USPL1Q5W0Q7 1092 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 LRP10Q7Z4F1 713 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 COL15A1P39059 1388 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 GOLGA6L6A8MZA4 724 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 CHGBP05060 677 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 TNNI3KQ59H18 835 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 NEK1Q96PY6 1258 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 FPGT-TNNI3KV9GXZ4 949 aa20.44■□□□□ 0.86
USB1-201ENST00000219281 PIP4K2AP48426 406 aaPredicted RBP20.43■□□□□ 0.86
USB1-201ENST00000219281 KRT32Q14532 448 aa20.43■□□□□ 0.86
USB1-201ENST00000219281 CCDC129Q6ZRS4 1044 aa20.43■□□□□ 0.86
USB1-201ENST00000219281 COPRSQ9NQ92 184 aa20.43■□□□□ 0.86
USB1-201ENST00000219281 MRC1P22897 1456 aa20.43■□□□□ 0.86
USB1-201ENST00000219281 ANO6Q4KMQ2 910 aa20.43■□□□□ 0.86
USB1-201ENST00000219281 TOM1L2Q6ZVM7 507 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms