RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 NFIXQ14938 502 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 ERFEQ4G0M1 354 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 HSP90AB4PQ58FF6 505 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 C16orf71Q8IYS4 520 aaPredicted RBP27.15■■□□□ 1.94
HOXC8-201ENST00000040584 TTLL11Q8NHH1 800 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 COPRSQ9NQ92 184 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 NBPF5PQ86XG9 351 aaPredicted RBP27.14■■□□□ 1.94
HOXC8-201ENST00000040584 FLAD1Q8NFF5 587 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 PNPLA7Q6ZV29 1317 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 GTF2E1P29083 439 aaPredicted RBP27.13■■□□□ 1.93
HOXC8-201ENST00000040584 G3BP1Q13283 466 aaKnown RBP eCLIP27.13■■□□□ 1.93
HOXC8-201ENST00000040584 SLC15A2Q16348 729 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 CCDC125Q86Z20 511 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 RHPN1Q8TCX5 695 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 NYXQ9GZU5 481 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 COL24A1Q17RW2 1714 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 CCDC57Q2TAC2 916 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 GREM2Q9H772 168 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 IL1RAPL2Q9NP60 686 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 STK32BQ9NY57 414 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 KIF1BPQ96EK5 621 aa27.11■■□□□ 1.93
HOXC8-201ENST00000040584 ZNF594Q96JF6 807 aaPredicted RBP27.11■■□□□ 1.93
HOXC8-201ENST00000040584 TPTE2Q6XPS3 522 aa27.1■■□□□ 1.93
HOXC8-201ENST00000040584 MYH3P11055 1940 aa27.1■■□□□ 1.93
HOXC8-201ENST00000040584 CARMIL3Q8ND23 1372 aa27.1■■□□□ 1.93
HOXC8-201ENST00000040584 DDX60Q8IY21 1712 aaKnown RBP27.1■■□□□ 1.93
HOXC8-201ENST00000040584 OTUD7AQ8TE49 926 aaPredicted RBP27.1■■□□□ 1.93
HOXC8-201ENST00000040584 HSP90B1P14625 803 aaKnown RBP27.09■■□□□ 1.93
HOXC8-201ENST00000040584 TM4SF1P30408 202 aa27.09■■□□□ 1.93
HOXC8-201ENST00000040584 IFIT5Q13325 482 aaKnown RBP27.09■■□□□ 1.93
HOXC8-201ENST00000040584 CCDC24Q8N4L8 307 aa27.09■■□□□ 1.93
HOXC8-201ENST00000040584 ERC1Q8IUD2 1116 aa27.08■■□□□ 1.93
HOXC8-201ENST00000040584 ABCC12Q96J65 1359 aa27.08■■□□□ 1.93
HOXC8-201ENST00000040584 SASH1O94885 1247 aa27.08■■□□□ 1.93
HOXC8-201ENST00000040584 ITGA6P23229 1130 aa27.08■■□□□ 1.93
HOXC8-201ENST00000040584 SLC10A5Q5PT55 438 aa27.07■■□□□ 1.92
HOXC8-201ENST00000040584 NPHP1O15259 732 aa27.06■■□□□ 1.92
HOXC8-201ENST00000040584 LAMB2P55268 1798 aa27.06■■□□□ 1.92
HOXC8-201ENST00000040584 C3orf67Q6ZVT6 689 aa27.06■■□□□ 1.92
HOXC8-201ENST00000040584 PLEKHM2Q8IWE5 1019 aa27.06■■□□□ 1.92
HOXC8-201ENST00000040584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.06■■□□□ 1.92
HOXC8-201ENST00000040584 ANKRD18BA2A2Z9 1011 aa27.05■■□□□ 1.92
HOXC8-201ENST00000040584 TAF7LQ5H9L4 462 aa27.05■■□□□ 1.92
HOXC8-201ENST00000040584 DDR1Q08345 913 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 CCDC152Q4G0S7 254 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 LRRC24Q50LG9 513 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 NLGN1Q8N2Q7 840 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 PUS3Q9BZE2 481 aaKnown RBP27.04■■□□□ 1.92
HOXC8-201ENST00000040584 UPF2Q9HAU5 1272 aaKnown RBP27.04■■□□□ 1.92
HOXC8-201ENST00000040584 SERPINB2P05120 415 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 ATG9AQ7Z3C6 839 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 CNBD1Q8NA66 436 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 EYA2O00167 538 aa27.03■■□□□ 1.92
HOXC8-201ENST00000040584 SEC31BQ9NQW1 1179 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 SALL3Q9BXA9 1300 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 POLRMTO00411 1230 aaKnown RBP27.02■■□□□ 1.92
HOXC8-201ENST00000040584 TFCP2Q12800 502 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 MSL1Q68DK7 614 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 PRR5LQ6MZQ0 368 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 CLASRPQ8N2M8 674 aaKnown RBP27.02■■□□□ 1.92
HOXC8-201ENST00000040584 BECN1Q14457 450 aa27.01■■□□□ 1.91
HOXC8-201ENST00000040584 SF3B3Q15393 1217 aaKnown RBP27.01■■□□□ 1.91
HOXC8-201ENST00000040584 NLRP3Q96P20 1036 aa27.01■■□□□ 1.91
HOXC8-201ENST00000040584 CIAO1O76071 339 aa27■■□□□ 1.91
HOXC8-201ENST00000040584 IL15P40933 162 aaPredicted RBP27■■□□□ 1.91
HOXC8-201ENST00000040584 LDHAL6AQ6ZMR3 332 aa26.99■■□□□ 1.91
HOXC8-201ENST00000040584 UPF1Q92900 1129 aaKnown RBP eCLIP26.99■■□□□ 1.91
HOXC8-201ENST00000040584 RTL9Q8NET4 1388 aa26.99■■□□□ 1.91
HOXC8-201ENST00000040584 PDE1AP54750 535 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 AACSQ86V21 672 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 OSBPL3Q9H4L5 887 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 MX1P20591 662 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 BMP2KLQ5H9B9 411 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 TSHZ3Q63HK5 1081 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 EAF2Q96CJ1 260 aaPredicted RBP26.98■■□□□ 1.91
HOXC8-201ENST00000040584 PDGFDQ9GZP0 370 aaPredicted RBP26.98■■□□□ 1.91
HOXC8-201ENST00000040584 FBXO3Q9UK99 471 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 QSER1Q2KHR3 1735 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 MMP10P09238 476 aa26.97■■□□□ 1.91
HOXC8-201ENST00000040584 ST5P78524 1137 aa26.96■■□□□ 1.91
HOXC8-201ENST00000040584 CNNM1Q9NRU3 951 aa26.96■■□□□ 1.91
HOXC8-201ENST00000040584 RIPOR2Q9Y4F9 1068 aa26.96■■□□□ 1.91
HOXC8-201ENST00000040584 CASZ1Q86V15 1759 aa26.96■■□□□ 1.91
HOXC8-201ENST00000040584 IFIT2P09913 472 aaKnown RBP26.96■■□□□ 1.91
HOXC8-201ENST00000040584 CCDC8Q9H0W5 538 aaPredicted RBP26.96■■□□□ 1.91
HOXC8-201ENST00000040584 STAP2Q9UGK3 403 aa26.95■■□□□ 1.9
HOXC8-201ENST00000040584 TNRC6CQ9HCJ0 1690 aaKnown RBP26.95■■□□□ 1.9
HOXC8-201ENST00000040584 TNNI3KQ59H18 835 aa26.94■■□□□ 1.9
HOXC8-201ENST00000040584 FPGT-TNNI3KV9GXZ4 949 aa26.94■■□□□ 1.9
HOXC8-201ENST00000040584 TTC22Q5TAA0 569 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 CEP126Q9P2H0 1117 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 GSPT1P15170 499 aaKnown RBP26.93■■□□□ 1.9
HOXC8-201ENST00000040584 NFKBIBQ15653 356 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 MPHOSPH8Q99549 860 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 TLR7Q9NYK1 1049 aaKnown RBP26.93■■□□□ 1.9
HOXC8-201ENST00000040584 PARP3Q9Y6F1 533 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 COL4A1P02462 1669 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 IGHMBP2P38935 993 aaKnown RBP26.92■■□□□ 1.9
HOXC8-201ENST00000040584 CDC5LQ99459 802 aaKnown RBP26.92■■□□□ 1.9
HOXC8-201ENST00000040584 SLC4A3P48751 1232 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms