RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 NFIXQ14938 502 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 ERFEQ4G0M1 354 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 HSP90AB4PQ58FF6 505 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 C16orf71Q8IYS4 520 aaPredicted RBP27.15■■□□□ 1.94
HOXC8-201ENST00000040584 TTLL11Q8NHH1 800 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 COPRSQ9NQ92 184 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 NBPF5PQ86XG9 351 aaPredicted RBP27.14■■□□□ 1.94
HOXC8-201ENST00000040584 FLAD1Q8NFF5 587 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 PNPLA7Q6ZV29 1317 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 GTF2E1P29083 439 aaPredicted RBP27.13■■□□□ 1.93
HOXC8-201ENST00000040584 G3BP1Q13283 466 aaKnown RBP eCLIP27.13■■□□□ 1.93
HOXC8-201ENST00000040584 SLC15A2Q16348 729 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 CCDC125Q86Z20 511 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 RHPN1Q8TCX5 695 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 NYXQ9GZU5 481 aa27.13■■□□□ 1.93
HOXC8-201ENST00000040584 COL24A1Q17RW2 1714 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 CCDC57Q2TAC2 916 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 GREM2Q9H772 168 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 IL1RAPL2Q9NP60 686 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 STK32BQ9NY57 414 aa27.12■■□□□ 1.93
HOXC8-201ENST00000040584 KIF1BPQ96EK5 621 aa27.11■■□□□ 1.93
HOXC8-201ENST00000040584 ZNF594Q96JF6 807 aaPredicted RBP27.11■■□□□ 1.93
HOXC8-201ENST00000040584 TPTE2Q6XPS3 522 aa27.1■■□□□ 1.93
HOXC8-201ENST00000040584 MYH3P11055 1940 aa27.1■■□□□ 1.93
HOXC8-201ENST00000040584 CARMIL3Q8ND23 1372 aa27.1■■□□□ 1.93
HOXC8-201ENST00000040584 DDX60Q8IY21 1712 aaKnown RBP27.1■■□□□ 1.93
HOXC8-201ENST00000040584 OTUD7AQ8TE49 926 aaPredicted RBP27.1■■□□□ 1.93
HOXC8-201ENST00000040584 HSP90B1P14625 803 aaKnown RBP27.09■■□□□ 1.93
HOXC8-201ENST00000040584 TM4SF1P30408 202 aa27.09■■□□□ 1.93
HOXC8-201ENST00000040584 IFIT5Q13325 482 aaKnown RBP27.09■■□□□ 1.93
HOXC8-201ENST00000040584 CCDC24Q8N4L8 307 aa27.09■■□□□ 1.93
HOXC8-201ENST00000040584 ERC1Q8IUD2 1116 aa27.08■■□□□ 1.93
HOXC8-201ENST00000040584 ABCC12Q96J65 1359 aa27.08■■□□□ 1.93
HOXC8-201ENST00000040584 SASH1O94885 1247 aa27.08■■□□□ 1.93
HOXC8-201ENST00000040584 ITGA6P23229 1130 aa27.08■■□□□ 1.93
HOXC8-201ENST00000040584 SLC10A5Q5PT55 438 aa27.07■■□□□ 1.92
HOXC8-201ENST00000040584 NPHP1O15259 732 aa27.06■■□□□ 1.92
HOXC8-201ENST00000040584 LAMB2P55268 1798 aa27.06■■□□□ 1.92
HOXC8-201ENST00000040584 C3orf67Q6ZVT6 689 aa27.06■■□□□ 1.92
HOXC8-201ENST00000040584 PLEKHM2Q8IWE5 1019 aa27.06■■□□□ 1.92
HOXC8-201ENST00000040584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.06■■□□□ 1.92
HOXC8-201ENST00000040584 ANKRD18BA2A2Z9 1011 aa27.05■■□□□ 1.92
HOXC8-201ENST00000040584 TAF7LQ5H9L4 462 aa27.05■■□□□ 1.92
HOXC8-201ENST00000040584 DDR1Q08345 913 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 CCDC152Q4G0S7 254 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 LRRC24Q50LG9 513 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 NLGN1Q8N2Q7 840 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 PUS3Q9BZE2 481 aaKnown RBP27.04■■□□□ 1.92
HOXC8-201ENST00000040584 UPF2Q9HAU5 1272 aaKnown RBP27.04■■□□□ 1.92
HOXC8-201ENST00000040584 SERPINB2P05120 415 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 ATG9AQ7Z3C6 839 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 CNBD1Q8NA66 436 aa27.04■■□□□ 1.92
HOXC8-201ENST00000040584 EYA2O00167 538 aa27.03■■□□□ 1.92
HOXC8-201ENST00000040584 SEC31BQ9NQW1 1179 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 SALL3Q9BXA9 1300 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 POLRMTO00411 1230 aaKnown RBP27.02■■□□□ 1.92
HOXC8-201ENST00000040584 TFCP2Q12800 502 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 MSL1Q68DK7 614 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 PRR5LQ6MZQ0 368 aa27.02■■□□□ 1.92
HOXC8-201ENST00000040584 CLASRPQ8N2M8 674 aaKnown RBP27.02■■□□□ 1.92
HOXC8-201ENST00000040584 BECN1Q14457 450 aa27.01■■□□□ 1.91
HOXC8-201ENST00000040584 SF3B3Q15393 1217 aaKnown RBP27.01■■□□□ 1.91
HOXC8-201ENST00000040584 NLRP3Q96P20 1036 aa27.01■■□□□ 1.91
HOXC8-201ENST00000040584 CIAO1O76071 339 aa27■■□□□ 1.91
HOXC8-201ENST00000040584 IL15P40933 162 aaPredicted RBP27■■□□□ 1.91
HOXC8-201ENST00000040584 LDHAL6AQ6ZMR3 332 aa26.99■■□□□ 1.91
HOXC8-201ENST00000040584 UPF1Q92900 1129 aaKnown RBP eCLIP26.99■■□□□ 1.91
HOXC8-201ENST00000040584 RTL9Q8NET4 1388 aa26.99■■□□□ 1.91
HOXC8-201ENST00000040584 PDE1AP54750 535 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 AACSQ86V21 672 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 OSBPL3Q9H4L5 887 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 MX1P20591 662 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 BMP2KLQ5H9B9 411 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 TSHZ3Q63HK5 1081 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 EAF2Q96CJ1 260 aaPredicted RBP26.98■■□□□ 1.91
HOXC8-201ENST00000040584 PDGFDQ9GZP0 370 aaPredicted RBP26.98■■□□□ 1.91
HOXC8-201ENST00000040584 FBXO3Q9UK99 471 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 QSER1Q2KHR3 1735 aa26.98■■□□□ 1.91
HOXC8-201ENST00000040584 MMP10P09238 476 aa26.97■■□□□ 1.91
HOXC8-201ENST00000040584 ST5P78524 1137 aa26.96■■□□□ 1.91
HOXC8-201ENST00000040584 CNNM1Q9NRU3 951 aa26.96■■□□□ 1.91
HOXC8-201ENST00000040584 RIPOR2Q9Y4F9 1068 aa26.96■■□□□ 1.91
HOXC8-201ENST00000040584 CASZ1Q86V15 1759 aa26.96■■□□□ 1.91
HOXC8-201ENST00000040584 IFIT2P09913 472 aaKnown RBP26.96■■□□□ 1.91
HOXC8-201ENST00000040584 CCDC8Q9H0W5 538 aaPredicted RBP26.96■■□□□ 1.91
HOXC8-201ENST00000040584 STAP2Q9UGK3 403 aa26.95■■□□□ 1.9
HOXC8-201ENST00000040584 TNRC6CQ9HCJ0 1690 aaKnown RBP26.95■■□□□ 1.9
HOXC8-201ENST00000040584 TNNI3KQ59H18 835 aa26.94■■□□□ 1.9
HOXC8-201ENST00000040584 FPGT-TNNI3KV9GXZ4 949 aa26.94■■□□□ 1.9
HOXC8-201ENST00000040584 TTC22Q5TAA0 569 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 CEP126Q9P2H0 1117 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 GSPT1P15170 499 aaKnown RBP26.93■■□□□ 1.9
HOXC8-201ENST00000040584 NFKBIBQ15653 356 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 MPHOSPH8Q99549 860 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 TLR7Q9NYK1 1049 aaKnown RBP26.93■■□□□ 1.9
HOXC8-201ENST00000040584 PARP3Q9Y6F1 533 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 COL4A1P02462 1669 aa26.93■■□□□ 1.9
HOXC8-201ENST00000040584 IGHMBP2P38935 993 aaKnown RBP26.92■■□□□ 1.9
HOXC8-201ENST00000040584 CDC5LQ99459 802 aaKnown RBP26.92■■□□□ 1.9
HOXC8-201ENST00000040584 SLC4A3P48751 1232 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms