RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Npy5rO70342 466 aa18.58■□□□□ 0.57
Ldb3-208ENSMUST00000228044 Ms4a2P20490 235 aa18.58■□□□□ 0.57
Ldb3-208ENSMUST00000228044 Anapc15P60007 132 aa18.58■□□□□ 0.57
Ldb3-208ENSMUST00000228044 Zc3h12cQ5DTV4 884 aa18.58■□□□□ 0.57
Ldb3-208ENSMUST00000228044 Vps54Q5SPW0 977 aa18.58■□□□□ 0.57
Ldb3-208ENSMUST00000228044 Asap2Q7SIG6 958 aa18.58■□□□□ 0.57
Ldb3-208ENSMUST00000228044 Tmem266Q8BZB3 538 aa18.58■□□□□ 0.57
Ldb3-208ENSMUST00000228044 Ttc14Q9CSP9 761 aa18.58■□□□□ 0.57
Ldb3-208ENSMUST00000228044 Cfap44E9Q5M6 1843 aa18.58■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Anxa1P10107 346 aaKnown RBP18.58■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Slc38a10Q5I012 1090 aa18.58■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Zkscan8Q8BSL0 588 aa18.58■□□□□ 0.56
Ldb3-208ENSMUST00000228044 HmcesQ8R1M0 353 aaKnown RBP18.58■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Top1mtQ8R4U6 593 aa18.58■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Mlh1Q9JK91 760 aa18.58■□□□□ 0.56
Ldb3-208ENSMUST00000228044 ZyxQ62523 564 aa18.57■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Ddx11Q6AXC6 880 aa18.57■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Tshz3Q8CGV9 1081 aa18.57■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Slc4a1P04919 929 aa18.56■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Jakmip1Q8BVL9 626 aa18.56■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Duox1A2AQ92 1551 aa18.56■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Stox1B2RQL2 990 aa18.55■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Gimap8Q75N62 688 aa18.55■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Plcd4Q8K3R3 807 aa18.55■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Krt25Q8VCW2 446 aa18.55■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Bin2D3Z6Q9 489 aa18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Ubap1lG3UW59 384 aa18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 CltaO08585 235 aa18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Srp68Q8BMA6 625 aaKnown RBP18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Mdm2P23804 489 aa18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Snrpa1P57784 255 aaKnown RBP18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Stk11ipQ3TAA7 1072 aa18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Rab3gap1Q80UJ7 981 aa18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 RtcbQ99LF4 505 aaKnown RBP18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Ppil4Q9CXG3 492 aaKnown RBP18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 LlphQ9D945 130 aaKnown RBP18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Cyp27a1Q9DBG1 533 aa18.54■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Ubr3Q5U430 1889 aa18.53■□□□□ 0.56
Ldb3-208ENSMUST00000228044 TsksO54887 585 aa18.53■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Rfx1P48377 963 aa18.53■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Ddx46Q569Z5 1032 aaKnown RBP18.53■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Bmp2kQ91Z96 1138 aa18.53■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Fbxo3Q9DC63 480 aa18.53■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Atp2b3Q0VF55 1220 aa18.52■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Plbd2Q3TCN2 594 aa18.52■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Ifit2Q64112 472 aa18.52■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Rdm1Q9CQK3 281 aa18.52■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Kcnq5Q9JK45 933 aa18.52■□□□□ 0.56
Ldb3-208ENSMUST00000228044 Plekhf1Q3TB82 279 aa18.52■□□□□ 0.55
Ldb3-208ENSMUST00000228044 AnlnQ8K298 1121 aaKnown RBP18.52■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Plekho1Q9JIY0 408 aa18.52■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Pde8bE9Q4S1 865 aa18.51■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Znf692Q3U381 531 aa18.51■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Ankrd13dQ6PD24 605 aa18.51■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Ubxn10Q8BG34 277 aa18.51■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Golim4Q8BXA1 655 aa18.51■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Ccne2Q9Z238 404 aa18.51■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Fam84aQ9D650 292 aa18.5■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Add2Q9QYB8 725 aa18.5■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Foxo3Q9WVH4 672 aa18.5■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Npc1l1Q6T3U4 1333 aa18.5■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Ubn2Q80WC1 1314 aa18.5■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Scn11aQ9R053 1765 aa18.5■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Pde4bB1AWC9 736 aa18.5■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Ift57Q8BXG3 429 aa18.5■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Sugp2Q8CH09 1067 aa18.5■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Zfyve9A2A8R0 1397 aa18.49■□□□□ 0.55
Ldb3-208ENSMUST00000228044 TnksQ6PFX9 1320 aa18.49■□□□□ 0.55
Ldb3-208ENSMUST00000228044 NpeppsQ11011 920 aa18.49■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Kiaa0319Q5SZV5 1081 aa18.49■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Tktl2Q9D4D4 627 aa18.49■□□□□ 0.55
Ldb3-208ENSMUST00000228044 PhaxQ9JJT9 385 aaKnown RBP18.49■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Sh3bp5Q9Z131 463 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Col3a1P08121 1464 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Col11a2Q64739 1736 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Rbm8a2A0A0N4SUH6 174 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Cyp3a57D3YYZ0 503 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 MecomP14404 1042 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Sept1P42209 366 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Nek11Q8C0Q4 628 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Amhr2Q8K592 568 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Sf3b3Q921M3 1217 aaKnown RBP18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Rbm8aQ9CWZ3 174 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Ak2Q9WTP6 239 aa18.48■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Vars2Q3U2A8 1060 aa18.47■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Fam160b2Q80YR2 744 aa18.47■□□□□ 0.55
Ldb3-208ENSMUST00000228044 StrbpQ91WM1 672 aaKnown RBP18.47■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Dbndd1Q9CZ00 160 aa18.47■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Znfx1Q8R151 1909 aaKnown RBP18.47■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Phactr2B1AVP0 632 aa18.46■□□□□ 0.55
Ldb3-208ENSMUST00000228044 VeztQ3ZK22 780 aa18.46■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Pdzrn3Q69ZS0 1063 aa18.46■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Myh7Q91Z83 1935 aa18.46■□□□□ 0.55
Ldb3-208ENSMUST00000228044 Ltv1Q6NSQ7 470 aaKnown RBP18.46■□□□□ 0.54
Ldb3-208ENSMUST00000228044 Sptlc3Q8BG54 563 aa18.46■□□□□ 0.54
Ldb3-208ENSMUST00000228044 Mb21d2Q8C525 428 aa18.46■□□□□ 0.54
Ldb3-208ENSMUST00000228044 Snapc4Q8BP86 1333 aa18.45■□□□□ 0.54
Ldb3-208ENSMUST00000228044 Ube4aE9Q735 1028 aa18.45■□□□□ 0.54
Ldb3-208ENSMUST00000228044 EappQ5BU09 281 aa18.45■□□□□ 0.54
Ldb3-208ENSMUST00000228044 Slc39a11Q8BWY7 342 aa18.45■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 115.2 ms