RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Irak4Q8R4K2 459 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Prr29B1ARI9 187 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Scp2P32020 547 aaKnown RBP8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Rtel1Q0VGM9 1203 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Ccdc114Q3UX62 658 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Rab3il1Q8VDV3 383 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 MicalclQ9D5U9 680 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Lonp2Q9DBN5 852 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 PalmQ9Z0P4 383 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Npdc1Q64322 332 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Mkrn1Q9QXP6 481 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 IncenpQ9WU62 880 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Zscan25B2RX31 543 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Ddb1Q3U1J4 1140 aaKnown RBP8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Taok3Q8BYC6 898 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Pm20d1Q8C165 503 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Mmel1Q9JLI3 765 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 EcsitQ9QZH6 435 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 P2rx7Q9Z1M0 595 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Uhrf1bp1lA2RSJ4 1457 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Bag1Q60739 355 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Klhl23Q6GQU2 558 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Acbd3Q8BMP6 525 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Ccdc92Q8VDN4 314 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Med4Q9CQA5 270 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Cep89Q9CZX2 791 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 PtprvP70289 1705 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Nrxn1Q9CS84 1514 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Pard3Q99NH2 1333 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Nub1P54729 614 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Cnksr2Q80YA9 1032 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Cchcr1Q8K2I2 770 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Ppp1r12aQ9DBR7 1029 aaKnown RBP8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Rsrc1Q9DBU6 334 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Ess2O70279 479 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Atp6v1dP57746 247 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Phc3Q8CHP6 981 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Ppp4r3bQ922R5 820 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Efcc1Q9JJF6 558 aa8.32□□□□□ -1.08
Chm-202ENSMUST00000113388 Exoc5Q3TPX4 708 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Nlrp4fQ66X05 959 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Plekhd1B2RPU2 505 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Atp11aP98197 1187 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Fam71bQ5STT6 665 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 RbsnQ80Y56 783 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 CrbnQ8C7D2 445 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Atg3Q9CPX6 314 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Zcchc17Q9ESX4 241 aaKnown RBP8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Vps37cQ8R105 352 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Antxr1Q9CZ52 562 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Smarcc1P97496 1104 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Ano8Q6PB70 1060 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Maats1Q8BRC6 783 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Pex19Q8VCI5 299 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 ErmapQ9JLN5 566 aa8.31□□□□□ -1.08
Chm-202ENSMUST00000113388 Nfat5Q9WV30 1534 aa8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 Brd1E9PZ26 1189 aaKnown RBP8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 Sugt1Q9CX34 336 aa8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 Sh3bgrQ9WUZ7 214 aa8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 Dctn1O08788 1281 aa8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 Bach2P97303 839 aa8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 Smarcc2Q6PDG5 1213 aa8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 Ccdc47Q9D024 483 aaKnown RBP8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 GsdmaQ9EST1 446 aa8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 CemipQ8BI06 1361 aa8.3□□□□□ -1.08
Chm-202ENSMUST00000113388 Ildr2B5TVM2 661 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Rasa1E9PYG6 1038 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Apaf1O88879 1249 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Tbc1d31Q6NXY1 996 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 A0A0U1RNP2 1173 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Ccdc152E9PX14 254 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Ppp1r15aP17564 657 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Zfp42P22227 288 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Impdh2P24547 514 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Zfp444Q3TDV8 331 aaKnown RBP8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Ankrd23Q812A3 306 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Wdr3Q8BHB4 942 aaKnown RBP8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Slx1bQ8BX32 270 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Stk3Q9JI10 497 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Rab3gap2Q8BMG7 1366 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Snap23O09044 210 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Nlrp4cQ3TKR3 982 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Gnl3lQ6PGG6 577 aaKnown RBP8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Larp1Q6ZQ58 1072 aaKnown RBP8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 LarsQ8BMJ2 1178 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Cabp2Q9JLK4 216 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Rgs17Q9QZB0 210 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 TnikP83510 1323 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Map3k7clP58500 142 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Sik1Q60670 779 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Mpp4Q6P7F1 635 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Adcy2Q80TL1 1090 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Morc4Q8BMD7 928 aa8.29□□□□□ -1.08
Chm-202ENSMUST00000113388 Gm21663A0A0G2JE01 267 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Gm7361D3Z6R1 267 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 5031410I06RikE9Q4E0 267 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Gm1979E9QAN3 267 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Gm5862K7N5V5 267 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Gm10220K7N660 267 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Hoxb7P09024 217 aa8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms