RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Irx4Q9QY61 515 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 Zfp251Q6PCX8 632 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 Atp2a1Q8R429 994 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 Sh3gl3Q62421 347 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 NapbP28663 298 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 Lrriq3Q14DL3 633 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 Pkd2l2Q9JLG4 621 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 Actn2Q9JI91 894 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 Bicdl2Q8CHW5 507 aa20.78■□□□□ 0.92
Trim71-201ENSMUST00000111816 Sec63Q8VHE0 760 aaKnown RBP20.78■□□□□ 0.92
Trim71-201ENSMUST00000111816 Epb41l2O70318 988 aaKnown RBP20.78■□□□□ 0.92
Trim71-201ENSMUST00000111816 Cpa2Q504N0 417 aa20.78■□□□□ 0.92
Trim71-201ENSMUST00000111816 RbsnQ80Y56 783 aa20.78■□□□□ 0.92
Trim71-201ENSMUST00000111816 Trim7Q923T7 510 aa20.78■□□□□ 0.92
Trim71-201ENSMUST00000111816 Nup62clA2AG10 272 aa20.78■□□□□ 0.92
Trim71-201ENSMUST00000111816 Ccdc175E9PVB3 822 aa20.78■□□□□ 0.92
Trim71-201ENSMUST00000111816 Tbc1d8Q9Z1A9 1134 aa20.78■□□□□ 0.92
Trim71-201ENSMUST00000111816 Krt79Q8VED5 531 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 PpanQ91YU8 470 aaKnown RBP20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Hs1bp3Q3TC93 395 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Ankib1Q6ZPS6 1085 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Mtmr3Q8K296 1196 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Nsd2Q8BVE8 1365 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Evi5lH3BKQ3 813 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Irx1P81068 480 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Bcap29Q61334 240 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Ppip5k2Q6ZQB6 1129 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 HnrnpcQ9Z204 313 aaKnown RBP20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 ScribQ80U72 1612 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Rpgrip1lQ8CG73 1264 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Hs2st1Q8R3H7 356 aa20.77■□□□□ 0.92
Trim71-201ENSMUST00000111816 Haus1Q8BHX1 278 aa20.77■□□□□ 0.91
Trim71-201ENSMUST00000111816 Sept8Q8CHH9 429 aa20.77■□□□□ 0.91
Trim71-201ENSMUST00000111816 HnrnpmQ9D0E1 729 aaKnown RBP20.77■□□□□ 0.91
Trim71-201ENSMUST00000111816 Hook2Q7TMK6 716 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 Atp1a4Q9WV27 1032 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 Gipc1Q9Z0G0 333 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 Sept3Q9Z1S5 350 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 Strn4P58404 760 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 Atp2b2Q9R0K7 1198 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 Pdcd7Q9WTY1 482 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 RcvrnP34057 202 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 Trim35Q8C006 501 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 Akr1b8P45377 316 aa20.76■□□□□ 0.91
Trim71-201ENSMUST00000111816 Kif6E9PX57 802 aa20.75■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ints8Q80V86 995 aa20.75■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ttc19Q8CC21 365 aa20.75■□□□□ 0.91
Trim71-201ENSMUST00000111816 Atp6v0a4Q920R6 833 aa20.75■□□□□ 0.91
Trim71-201ENSMUST00000111816 Hmgb3O54879 200 aaKnown RBP20.75■□□□□ 0.91
Trim71-201ENSMUST00000111816 Esyt2Q3TZZ7 845 aa20.75■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ankrd35E9Q9D8 996 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Zfpm1O35615 995 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ccdc110Q3V125 848 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Brd1E9PZ26 1189 aaKnown RBP20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Zfp213E9QAW0 468 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Zfyve27Q3TXX3 415 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Rab44Q8CB87 725 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Haus2Q9CQS9 234 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Pde4bB1AWC9 736 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Becn2P0DM65 447 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ccdc97Q9DBT3 340 aa20.74■□□□□ 0.91
Trim71-201ENSMUST00000111816 Atp6v0a2P15920 856 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Spc25Q3UA16 226 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Gigyf1Q99MR1 1044 aaKnown RBP20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Msantd4Q91YU3 345 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Fam186bD3Z420 943 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Cdr2P97817 455 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ssrp1Q08943 708 aaKnown RBP20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Drc1Q3USS3 753 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Nap1l4Q78ZA7 375 aaKnown RBP20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Daam1Q8BPM0 1077 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Trim68Q8K243 485 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Usp25P57080 1055 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Epb41l3Q9WV92 929 aa20.73■□□□□ 0.91
Trim71-201ENSMUST00000111816 Syt1P46096 421 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Cnga4Q3UW12 575 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Traf3ip1Q149C2 625 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Srek1ip1Q4V9W2 153 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 BlvraQ9CY64 295 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Fhdc1Q3ULZ2 1149 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Trak2Q6P9N8 913 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ribc1Q9D0B8 379 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Fkbp5Q64378 456 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Rapgef4Q9EQZ6 1011 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Egfl6Q9JJZ5 550 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Plcb1Q9Z1B3 1216 aa20.72■□□□□ 0.91
Trim71-201ENSMUST00000111816 Gm21698A0A087WQP8 267 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Gm21663A0A0G2JE01 267 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Gm7347D3YYI9 267 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 5031410I06RikE9Q4E0 267 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 SbdsP70122 250 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Brf1Q8CFK2 676 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ccdc66Q6NS45 935 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Paip2bQ91W45 136 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ttc5Q99LG4 440 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Serpinb1cQ5SV42 375 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Mybpc2Q5XKE0 1136 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ptpdc1Q6NZK8 747 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Ublcp1Q8BGR9 318 aa20.71■□□□□ 0.91
Trim71-201ENSMUST00000111816 Rbm19Q8R3C6 952 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms