Protein–RNA interactions for Protein: Q8CB87

Rab44, Ras-related protein Rab-44, mousemouse

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab44Q8CB87 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Rab44Q8CB87 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
Rab44Q8CB87 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rab44Q8CB87 Gm25239-201ENSMUST00000174915 86 ntBASIC32.85■■■□□ 2.85
Rab44Q8CB87 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Rab44Q8CB87 Psd-208ENSMUST00000224556 2034 ntBASIC32.51■■■□□ 2.79
Rab44Q8CB87 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rab44Q8CB87 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Rab44Q8CB87 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rab44Q8CB87 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rab44Q8CB87 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Rab44Q8CB87 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rab44Q8CB87 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Rab44Q8CB87 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rab44Q8CB87 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rab44Q8CB87 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rab44Q8CB87 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Rab44Q8CB87 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Rab44Q8CB87 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Rab44Q8CB87 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.19■■■□□ 2.42
Rab44Q8CB87 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rab44Q8CB87 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rab44Q8CB87 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rab44Q8CB87 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rab44Q8CB87 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rab44Q8CB87 Gm15042-201ENSMUST00000120212 883 ntBASIC29.63■■■□□ 2.33
Rab44Q8CB87 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rab44Q8CB87 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rab44Q8CB87 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.52■■■□□ 2.32
Rab44Q8CB87 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.37■■■□□ 2.29
Rab44Q8CB87 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.28■■■□□ 2.28
Rab44Q8CB87 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.28
Rab44Q8CB87 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rab44Q8CB87 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rab44Q8CB87 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Rab44Q8CB87 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.15■■■□□ 2.26
Rab44Q8CB87 Gm15045-201ENSMUST00000117359 883 ntBASIC29.15■■■□□ 2.26
Rab44Q8CB87 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.12■■■□□ 2.25
Rab44Q8CB87 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.12■■■□□ 2.25
Rab44Q8CB87 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rab44Q8CB87 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rab44Q8CB87 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Rab44Q8CB87 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rab44Q8CB87 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
Rab44Q8CB87 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rab44Q8CB87 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Rab44Q8CB87 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Rab44Q8CB87 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Rab44Q8CB87 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Rab44Q8CB87 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.65■■■□□ 2.18
Rab44Q8CB87 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Rab44Q8CB87 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rab44Q8CB87 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rab44Q8CB87 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rab44Q8CB87 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rab44Q8CB87 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.38■■■□□ 2.13
Rab44Q8CB87 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Rab44Q8CB87 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Rab44Q8CB87 Gm24109-201ENSMUST00000175489 103 ntBASIC28.31■■■□□ 2.12
Rab44Q8CB87 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rab44Q8CB87 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rab44Q8CB87 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rab44Q8CB87 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rab44Q8CB87 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rab44Q8CB87 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rab44Q8CB87 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Rab44Q8CB87 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rab44Q8CB87 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rab44Q8CB87 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.11■■■□□ 2.09
Rab44Q8CB87 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Rab44Q8CB87 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rab44Q8CB87 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Rab44Q8CB87 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rab44Q8CB87 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Rab44Q8CB87 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Rab44Q8CB87 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Rab44Q8CB87 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rab44Q8CB87 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Rab44Q8CB87 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rab44Q8CB87 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rab44Q8CB87 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.74■■■□□ 2.03
Rab44Q8CB87 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rab44Q8CB87 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Rab44Q8CB87 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rab44Q8CB87 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rab44Q8CB87 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rab44Q8CB87 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.55■■■□□ 2
Rab44Q8CB87 Gm23366-201ENSMUST00000175022 89 ntBASIC27.54■■■□□ 2
Rab44Q8CB87 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rab44Q8CB87 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rab44Q8CB87 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Rab44Q8CB87 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rab44Q8CB87 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rab44Q8CB87 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rab44Q8CB87 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rab44Q8CB87 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Rab44Q8CB87 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rab44Q8CB87 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rab44Q8CB87 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Rab44Q8CB87 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.4■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 470.5 ms