RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Usp28Q5I043 1051 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tmco3Q8BH01 678 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Hmg20bQ9Z104 317 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Zbtb21E9Q444 1094 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tpm4Q6IRU2 248 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Bmp2kQ91Z96 1138 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Hand2Q61039 217 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Wdr3Q8BHB4 942 aaKnown RBP17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Mroh1E0CZ22 1640 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Fam228bQ497Q6 232 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Vps54Q5SPW0 977 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 CoilQ5SU73 570 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Ccdc82Q6PG04 518 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Frmpd2A0A140LI67 1392 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Q8BZJ8 459 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Hoxc9P09633 260 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Cyp2d11P24457 504 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Golim4Q8BXA1 655 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Chmp7Q8R1T1 451 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 PtprtQ99M80 1454 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tbc1d4Q8BYJ6 1307 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Fyb1O35601 819 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Prpf4bQ61136 1007 aaKnown RBP17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tbc1d30Q69ZT9 766 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Rrs1Q9CYH6 365 aaKnown RBP17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Xpo4Q9ESJ0 1151 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 LratQ9JI60 231 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Cnksr1A2A9K7 700 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Gm10563F6WIE4 79 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Maats1Q8BRC6 783 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Lmbrd2Q8C561 694 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Hmx1O70218 332 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Kif2aP28740 705 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tmc2Q8R4P4 888 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Mrps25Q9D125 171 aaKnown RBP17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Zfp317Q8C0Q5 607 aa17.58■□□□□ 0.41
Usp4-201ENSMUST00000035237 Cdk4P30285 303 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Eif4a1P60843 406 aaKnown RBP17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ctdnep1Q3TP92 244 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ube2oQ6ZPJ3 1288 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tmem67Q8BR76 992 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Dnajc25A2ALW5 357 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ino80Q6ZPV2 1559 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 GckrQ91X44 587 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tlcd1Q99JT6 247 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Igsf1Q7TQA1 1317 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Plekhg1F6S200 1446 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 LyarQ08288 388 aaKnown RBP17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Lamb3Q61087 1168 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Actn3O88990 900 aaKnown RBP17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Znf532Q6NXK2 1036 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Erc1Q99MI1 1120 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tecpr2Q3UH45 1423 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Igsf3Q6ZQA6 1194 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Cdca8Q8BHX3 289 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 FancaQ9JL70 1439 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 4930407I10RikD3Z5T8 1512 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Prl7a2O54831 253 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Dmrt2Q8BG36 561 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 NmiO35309 314 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Rrp1P56183 494 aaKnown RBP17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Idi1P58044 227 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Gng11P61953 73 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Cul9Q80TT8 1865 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Nfatc2ipO09130 412 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Znhit6Q3UFB2 460 aaKnown RBP17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Dhx38Q80X98 1228 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 U2af1l4Q8BGJ9 220 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Zmynd15Q8C0R7 736 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Fam76aQ922G2 307 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ktn1Q61595 1327 aaKnown RBP17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Gm21985Q6P6P5 1106 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ubn2Q80WC1 1314 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ms4a1P19437 291 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 CtcfQ61164 736 aaKnown RBP17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Larp6Q8BN59 492 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Nek11Q8C0Q4 628 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Atg3Q9CPX6 314 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tpm3-rs7D3Z2H9 248 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Me1P06801 572 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Arglu1Q3UL36 271 aaKnown RBP17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Klhl34A2AI76 644 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Nxf7Q80SZ6 620 aaKnown RBP17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Col4a3bpQ9EQG9 624 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Cdc45Q9Z1X9 566 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Aox4Q3TYQ9 1336 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 BcanQ61361 883 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Lonp2Q9DBN5 852 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Chd1P40201 1711 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 ItpripQ3TNL8 555 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Trak2Q6P9N8 913 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Abcc4E9Q236 1325 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 AceP09470 1312 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 GmnnO88513 206 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Soga3Q6NZL0 945 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ddx58Q6Q899 926 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tsen34Q8BMZ5 316 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 AidaQ8C4Q6 305 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Golph3lQ8R088 285 aaKnown RBP17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Nol10Q5RJG1 687 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 179.1 ms