RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Usp28Q5I043 1051 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tmco3Q8BH01 678 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Hmg20bQ9Z104 317 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Zbtb21E9Q444 1094 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tpm4Q6IRU2 248 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Bmp2kQ91Z96 1138 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Hand2Q61039 217 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Wdr3Q8BHB4 942 aaKnown RBP17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Mroh1E0CZ22 1640 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Fam228bQ497Q6 232 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Vps54Q5SPW0 977 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 CoilQ5SU73 570 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Ccdc82Q6PG04 518 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Frmpd2A0A140LI67 1392 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Q8BZJ8 459 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Hoxc9P09633 260 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Cyp2d11P24457 504 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Golim4Q8BXA1 655 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 Chmp7Q8R1T1 451 aa17.6■□□□□ 0.41
Usp4-201ENSMUST00000035237 PtprtQ99M80 1454 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tbc1d4Q8BYJ6 1307 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Fyb1O35601 819 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Prpf4bQ61136 1007 aaKnown RBP17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tbc1d30Q69ZT9 766 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Rrs1Q9CYH6 365 aaKnown RBP17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Xpo4Q9ESJ0 1151 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 LratQ9JI60 231 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Cnksr1A2A9K7 700 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Gm10563F6WIE4 79 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Maats1Q8BRC6 783 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Lmbrd2Q8C561 694 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Hmx1O70218 332 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Kif2aP28740 705 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Tmc2Q8R4P4 888 aa17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Mrps25Q9D125 171 aaKnown RBP17.59■□□□□ 0.41
Usp4-201ENSMUST00000035237 Zfp317Q8C0Q5 607 aa17.58■□□□□ 0.41
Usp4-201ENSMUST00000035237 Cdk4P30285 303 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Eif4a1P60843 406 aaKnown RBP17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ctdnep1Q3TP92 244 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ube2oQ6ZPJ3 1288 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tmem67Q8BR76 992 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Dnajc25A2ALW5 357 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ino80Q6ZPV2 1559 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 GckrQ91X44 587 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tlcd1Q99JT6 247 aa17.58■□□□□ 0.4
Usp4-201ENSMUST00000035237 Igsf1Q7TQA1 1317 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Plekhg1F6S200 1446 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 LyarQ08288 388 aaKnown RBP17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Lamb3Q61087 1168 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Actn3O88990 900 aaKnown RBP17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Znf532Q6NXK2 1036 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Erc1Q99MI1 1120 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tecpr2Q3UH45 1423 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Igsf3Q6ZQA6 1194 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 Cdca8Q8BHX3 289 aa17.57■□□□□ 0.4
Usp4-201ENSMUST00000035237 FancaQ9JL70 1439 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 4930407I10RikD3Z5T8 1512 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Prl7a2O54831 253 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Dmrt2Q8BG36 561 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 NmiO35309 314 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Rrp1P56183 494 aaKnown RBP17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Idi1P58044 227 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Gng11P61953 73 aa17.56■□□□□ 0.4
Usp4-201ENSMUST00000035237 Cul9Q80TT8 1865 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Nfatc2ipO09130 412 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Znhit6Q3UFB2 460 aaKnown RBP17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Dhx38Q80X98 1228 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 U2af1l4Q8BGJ9 220 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Zmynd15Q8C0R7 736 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Fam76aQ922G2 307 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ktn1Q61595 1327 aaKnown RBP17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Gm21985Q6P6P5 1106 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ubn2Q80WC1 1314 aa17.55■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ms4a1P19437 291 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 CtcfQ61164 736 aaKnown RBP17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Larp6Q8BN59 492 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Nek11Q8C0Q4 628 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Atg3Q9CPX6 314 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tpm3-rs7D3Z2H9 248 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Me1P06801 572 aa17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Arglu1Q3UL36 271 aaKnown RBP17.54■□□□□ 0.4
Usp4-201ENSMUST00000035237 Klhl34A2AI76 644 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Nxf7Q80SZ6 620 aaKnown RBP17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Col4a3bpQ9EQG9 624 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Cdc45Q9Z1X9 566 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Aox4Q3TYQ9 1336 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 BcanQ61361 883 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Lonp2Q9DBN5 852 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Chd1P40201 1711 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 ItpripQ3TNL8 555 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Trak2Q6P9N8 913 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 Abcc4E9Q236 1325 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 AceP09470 1312 aa17.53■□□□□ 0.4
Usp4-201ENSMUST00000035237 GmnnO88513 206 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Soga3Q6NZL0 945 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Ddx58Q6Q899 926 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Tsen34Q8BMZ5 316 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 AidaQ8C4Q6 305 aa17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Golph3lQ8R088 285 aaKnown RBP17.52■□□□□ 0.4
Usp4-201ENSMUST00000035237 Nol10Q5RJG1 687 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms