RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Arhgap4B1AUY3 965 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 AU015836B2RUM3 263 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 2310050C09RikG5E8Z3 280 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Pla2g4bP0C871 782 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gbp1Q01514 589 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Limch1Q3UH68 1057 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Rnf223Q3UV31 285 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Znf280cQ6P3Y5 742 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Cypt2Q6P924 180 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Vps37dQ810I0 261 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Aldh1a1P24549 501 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Cdh15P33146 784 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Rplp1P47955 114 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gabpb2P81069 414 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Hdgfl1Q2VPR5 283 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Itga6Q61739 1091 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Sv2cQ69ZS6 727 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Phka2Q8BWJ3 1235 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 DymQ8CHY3 669 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Pcdhb19Q91Y01 801 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Plagl1Q9JLQ4 704 aa6.44□□□□□ -1.38
Clk1-201ENSMUST00000034868 Rad54l2Q99NG0 1466 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Map7d2A2AG50 781 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Dcaf10A2AKB9 566 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 CerklA2AQH1 525 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Adh6aE9Q5Z6 375 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Msl3l2G3X992 371 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gsg1l2M0QWL6 290 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Arhgap6O54834 987 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gpr3P35413 330 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Rab33aP97950 237 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ankmy2Q3TPE9 440 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Pbxip1Q3TVI8 727 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Q3UPC7 1272 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Kctd12Q6WVG3 327 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gtdc1Q8BW56 445 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Mettl3Q8C3P7 580 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Sertm1Q8CD78 107 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Fam161aQ8QZV6 448 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Itgbl1Q8VDV0 494 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Stag1Q9D3E6 1258 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Fmnl1Q9JL26 1094 aa6.43□□□□□ -1.38
Clk1-201ENSMUST00000034868 Cep120Q7TSG1 988 aa6.42□□□□□ -1.38
Clk1-201ENSMUST00000034868 R3hcc1Q8BSI6 488 aa6.42□□□□□ -1.38
Clk1-201ENSMUST00000034868 Zeb2Q9R0G7 1215 aa6.42□□□□□ -1.38
Clk1-201ENSMUST00000034868 Prdm15E9Q8T2 1174 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Zscan10Q3URR7 782 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gnl3lQ6PGG6 577 aaKnown RBP6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Kirrel2Q7TSU7 700 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Zbtb42Q811H0 420 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Snw1Q9CSN1 536 aaKnown RBP6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Sertad1Q9JL10 236 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Pias4Q9JM05 507 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Tmub1Q9JMG3 245 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Washc2Q6PGL7 1334 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Phactr2B1AVP0 632 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ppfia4B8QI36 1187 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Serpinb6eI7HJI3 429 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ampd3O08739 766 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 CfbP04186 761 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Calr4Q3TQS0 420 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ankib1Q6ZPS6 1085 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Cdan1Q8CC12 1239 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Eif4a3Q91VC3 411 aaKnown RBP6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ankrd1Q9CR42 319 aa6.41□□□□□ -1.38
Clk1-201ENSMUST00000034868 Adgrl3Q80TS3 1537 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gm17615E9Q9P2 165 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Sbk2P0C5K1 362 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Pax4P32115 349 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Chpf2Q3UU43 768 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Fbxo11Q7TPD1 930 aaKnown RBP6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Prpf40bQ80W14 870 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 IqubQ8CDK3 788 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Amotl2Q8K371 772 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Rbm12Q8R4X3 992 aaKnown RBP6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Sec16bQ91XT4 1051 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gsdmdc1Q9D8T2 487 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ccdc97Q9DBT3 340 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Prl2a1Q9JHK0 228 aa6.4□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ccdc88bQ4QRL3 1481 aa6.4□□□□□ -1.39
Clk1-201ENSMUST00000034868 Myl1P05977 188 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 AppP12023 770 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Rad23bP54728 416 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Q3UJP5 209 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ppp1r1bQ60829 194 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Taf1cQ6PDZ2 836 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Bend7Q8BSV3 434 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 V1ra11Q8R2E6 318 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Dhrs4Q99LB2 279 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 RtcbQ99LF4 505 aaKnown RBP6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Nol7Q9D7Z3 254 aaKnown RBP6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 EtfbQ9DCW4 255 aaKnown RBP6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Prss30Q9QYZ9 310 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Anapc15-psA0A140T8L6 141 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Gm3618D3Z4P5 127 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Rasal2E9PW37 1286 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Sf3b2Q3UJB0 878 aaKnown RBP6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Mum1l1Q4VA55 681 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Stac3Q8BZ71 360 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Dact1Q8R4A3 778 aa6.39□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms