RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MALT1Q9UDY8 824 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 HAO1Q9UJM8 370 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 GDF2Q9UK05 429 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-219ENST00000440240 POU2F3Q9UKI9 436 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 B3GALT5Q9Y2C3 310 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 SLC25A15Q9Y619 301 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 RTTNQ86VV8 2226 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 PRAMEF27A3QJZ7 478 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 HMGN4O00479 90 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 ZNF208O43345 1280 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 DHRS4L1P0CG22 281 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 NTF4P34130 210 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 SLC35A1P78382 337 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 CCDC103Q8IW40 242 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 MREGQ8N565 214 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 SPATA3Q8NHX4 192 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 CNOT9Q92600 299 aaKnown RBP18.26■□□□□ 0.51
CPNE1-219ENST00000440240 SORT1Q99523 831 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 DHRS9Q9BPW9 319 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 NAA11Q9BSU3 229 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-219ENST00000440240 CBLN4Q9NTU7 201 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 PRDM4Q9UKN5 801 aa18.26■□□□□ 0.51
CPNE1-219ENST00000440240 TMED7-TICAM2A0A0A6YYA0 188 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 CCDC154A6NI56 674 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 AGAP5A6NIR3 686 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 CLDN24A6NM45 220 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 E7EQL1 145 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 CD5LO43866 347 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 SSX4O60224 188 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 CCNA2P20248 432 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 CD40P25942 277 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 SLC1A3P43003 542 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 ZNF83P51522 516 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 POLR2HP52434 150 aaKnown RBP18.25■□□□□ 0.51
CPNE1-219ENST00000440240 DSCR9P59020 149 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 LRRC74AQ0VAA2 488 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 STX3Q13277 289 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 GABRA6Q16445 453 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 C1QTNF12Q5T7M4 302 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 OGFOD2Q6N063 350 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 LRRC74BQ6ZQY2 392 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 CXXC5Q7LFL8 322 aaKnown RBP18.25■□□□□ 0.51
CPNE1-219ENST00000440240 HMGN2P46Q86SG4 172 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 RNF130Q86XS8 419 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 FBXL14Q8N1E6 418 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 DNAJA3Q96EY1 480 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 PANX1Q96RD7 426 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 MEAF6Q9HAF1 191 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 SLC9A8Q9Y2E8 581 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 TMED7Q9Y3B3 224 aa18.25■□□□□ 0.51
CPNE1-219ENST00000440240 STAB1Q9NY15 2570 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 FBN1P35555 2871 aaKnown RBP18.24■□□□□ 0.51
CPNE1-219ENST00000440240 FAAHO00519 579 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 UQCRBP14927 111 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 PTNP21246 168 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 TGFBR3Q03167 851 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 SYPL1Q16563 259 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 MUC15Q8N387 334 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 ANKFN1Q8N957 763 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 SLC38A1Q9H2H9 487 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 YAE1D1Q9NRH1 226 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 UPB1Q9UBR1 384 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 OSGIN1Q9UJX0 560 aa18.24■□□□□ 0.51
CPNE1-219ENST00000440240 ANK3Q12955 4377 aaKnown RBP18.23■□□□□ 0.51
CPNE1-219ENST00000440240 CHD3Q12873 2000 aaKnown RBP18.23■□□□□ 0.51
CPNE1-219ENST00000440240 IFNA2P01563 188 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 BMP4P12644 408 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 IL7RP16871 459 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 BGNP21810 368 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 TACR3P29371 465 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 NUDT6P53370 316 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 UFM1P61960 85 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 PLAURQ03405 335 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 RAB35Q15286 201 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 GSTA3Q16772 222 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 ZNF544Q6NX49 715 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 CASP12Q6UXS9 341 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 ZNF621Q6ZSS3 439 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 SPATA19Q7Z5L4 167 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 HIPK1Q86Z02 1210 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 C17orf78Q8N4C9 275 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 TEX37Q96LM6 180 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 OR52E6Q96RD3 313 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 CACNG6Q9BXT2 260 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 KCNK9Q9NPC2 374 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 DCTN4Q9UJW0 460 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 FLVCR1Q9Y5Y0 555 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 FBN3Q75N90 2809 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 MXRA5Q9NR99 2828 aa18.23■□□□□ 0.51
CPNE1-219ENST00000440240 A0A1W2PR80 420 aa18.22■□□□□ 0.51
CPNE1-219ENST00000440240 CFAP73A6NFT4 308 aa18.22■□□□□ 0.51
CPNE1-219ENST00000440240 M0R1B8 84 aa18.22■□□□□ 0.51
CPNE1-219ENST00000440240 PDLIM1O00151 329 aa18.22■□□□□ 0.51
CPNE1-219ENST00000440240 AP3D1O14617 1153 aa18.22■□□□□ 0.51
CPNE1-219ENST00000440240 PGRP06401 933 aa18.22■□□□□ 0.51
CPNE1-219ENST00000440240 DBIP07108 87 aaKnown RBP18.22■□□□□ 0.51
CPNE1-219ENST00000440240 ITGA5P08648 1049 aa18.22■□□□□ 0.51
CPNE1-219ENST00000440240 NR2F1P10589 423 aa18.22■□□□□ 0.51
CPNE1-219ENST00000440240 FABP6P51161 128 aa18.22■□□□□ 0.51
CPNE1-219ENST00000440240 IRX1P78414 480 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms