RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PTP4A3O75365 173 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 CELA2AP08217 269 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 IFI30P13284 250 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 GRK5P34947 590 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 RNF144AP50876 292 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-204ENST00000395454 RAB40BQ12829 278 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 SKP2Q13309 424 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 CRTC2Q53ET0 693 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-204ENST00000395454 ALG10BQ5I7T1 473 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 SLC30A6Q6NXT4 461 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 CYP4Z2PQ8N1L4 340 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 LNX2Q8N448 690 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 CLEC1AQ8NC01 280 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 FANK1Q8TC84 345 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 VMP1Q96GC9 406 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 FER1L6-AS2Q96M78 137 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 SEMA4CQ9C0C4 833 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 WWTR1Q9GZV5 400 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 OR52D1Q9H346 318 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 FN3KQ9H479 309 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCAF11-204ENST00000395454 ICAM5Q9UMF0 924 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 POLHQ9Y253 713 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 ACACBO00763 2458 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 C2orf92A0A1B0GVN3 265 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 ARGFXA6NJG6 315 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 RCBTB2O95199 551 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 BCL10O95999 233 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 ICAM2P13598 275 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 FHL1Q13642 323 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 KLHL22Q53GT1 634 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 BCDIN3DQ7Z5W3 292 aaKnown RBP13.78□□□□□ -0.2
SCAF11-204ENST00000395454 ANKK1Q8NFD2 765 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 PROKR2Q8NFJ6 384 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 TBC1D15Q8TC07 691 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 EFHD2Q96C19 240 aaPredicted RBP13.78□□□□□ -0.2
SCAF11-204ENST00000395454 SLC19A3Q9BZV2 496 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 CPNE5Q9HCH3 593 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 ATP13A2Q9NQ11 1180 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 TAS2R16Q9NYV7 291 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 A0A087WUJ7 227 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 TRBV11-1A0A0K0K1C0 115 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 A0A1W2PQD3 144 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 TSPAN2O60636 221 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 UTS2O95399 124 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 INHBBP09529 407 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 ENDOUP21128 410 aaKnown RBP13.78□□□□□ -0.2
SCAF11-204ENST00000395454 RGS6P49758 472 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 CHAF1BQ13112 559 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 CLEC12AQ5QGZ9 265 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 NXNL2Q5VZ03 156 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 HSDL2Q6YN16 418 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 CDK20Q8IZL9 346 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 OR52I1Q8NGK6 324 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 M1APQ8TC57 530 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 THAP3Q8WTV1 239 aaPredicted RBP13.78□□□□□ -0.2
SCAF11-204ENST00000395454 RFKQ969G6 155 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 HSPBAP1Q96EW2 488 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 SAMD8Q96LT4 415 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 DACH2Q96NX9 599 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 GAL3ST4Q96RP7 486 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 JAM3Q9BX67 310 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 SLC24A3Q9HC58 644 aa13.78□□□□□ -0.2
SCAF11-204ENST00000395454 PTPRQQ9UMZ3 2332 aa13.77□□□□□ -0.2
SCAF11-204ENST00000395454 DOCK10Q96BY6 2186 aa13.77□□□□□ -0.2
SCAF11-204ENST00000395454 TMEM8BA6NDV4 472 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 RAB36O95755 333 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 RRADP55042 308 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 Q0VFX4 171 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 DOC2BQ14184 412 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 CD226Q15762 336 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 DEFB109BQ30KR1 87 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 APOOLQ6UXV4 268 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 SLC29A4Q7RTT9 530 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 ATCAYQ86WG3 371 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 SLC34A3Q8N130 599 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 OR52L1Q8NGH7 329 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 DYNC2LI1Q8TCX1 351 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 ELP5Q8TE02 316 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 GRHL3Q8TE85 626 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 C3orf49Q96BT1 292 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 LGALS12Q96DT0 336 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 OR5M11Q96RB7 305 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 MGLLQ99685 303 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 MND1Q9BWT6 205 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 MMP25Q9NPA2 562 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 BAIAP2Q9UQB8 552 aa13.77□□□□□ -0.21
SCAF11-204ENST00000395454 A0A087WV48 116 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 HCN1O60741 890 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 CLPXO76031 633 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 SCG5P05408 212 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 UBL4AP11441 157 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 ITGA3P26006 1051 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 MTNR1AP48039 350 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 UCNP55089 124 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 TMPRSS3P57727 454 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 RNF4P78317 190 aa13.76□□□□□ -0.21
SCAF11-204ENST00000395454 AIMP2Q13155 320 aaKnown RBP13.76□□□□□ -0.21
SCAF11-204ENST00000395454 ARMCX4Q5H9R4 360 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms