RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Dnajc22Q8CHS2 339 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Abhd4Q8VD66 342 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ces2cQ91WG0 561 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Thumpd1Q99J36 350 aaKnown RBP14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 MynnQ99MD8 610 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tssk4Q9D411 328 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem41aQ9D8U2 264 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 GabarapQ9DCD6 117 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Nqo2Q9JI75 231 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Znf106O88466 1888 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Dcaf4A0A1Y7VNZ0 532 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Alox12eP55249 662 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 TigitP86176 249 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mtcp1Q60945 107 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 ManeaQ6NXH2 462 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Kctd9Q80UN1 339 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Lyrm4Q8K215 91 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 NansQ99J77 359 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 2200002D01RikQ9D809 114 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tex29Q9DA77 186 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cyp4a31F8WGU9 509 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cd38P56528 304 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ankrd28Q505D1 1053 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 4933402N03RikQ8CDT9 329 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Lgi4Q8K1S1 537 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Vmn1r75Q8R289 305 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 NrarpQ91ZA8 114 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cd209aQ91ZX1 238 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cpn2Q9DBB9 547 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem43Q9DBS1 400 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 1700023F06RikA2AB62 382 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr723E9PZU2 309 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr724K7N5X7 309 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 H2-ObO35424 271 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 N6amt1Q6SKR2 214 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Slc35f2Q7TML3 375 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Hamp2Q80T19 83 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zbtb37Q8C3U9 504 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ncr1Q8C567 325 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Arl6ip5Q8R5J9 188 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gatad2bQ8VHR5 594 aaKnown RBP14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Oas3Q8VI93 1138 aaKnown RBP14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Pot1Q91WC1 640 aaKnown RBP14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Lrg1Q91XL1 342 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 TMEM121BQ99MX7 572 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Fezf2Q9ESP5 455 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ate1Q9Z2A5 516 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem215A7E1Z1 235 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 F10O88947 481 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Pou3f3P31361 497 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Capza1P47753 286 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Wdr20Q3UWE6 569 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mrgprb3Q91ZC1 312 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Rab3bQ9CZT8 219 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 TriobpQ99KW3 2014 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr1247A2AT78 314 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Sstr4P49660 385 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 A730061H03RikQ8BGD2 154 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 D2hgdhQ8CIM3 535 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ptcd2Q8R3K3 381 aaKnown RBP14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr478Q8VG04 314 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Q8WUR0 141 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Plce1Q8K4S1 2282 aa14.54□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zfp383A0A087WRR7 490 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr1193A2AV13 318 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmed7D3YZZ5 224 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Spata31d1cE9QAF1 853 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mcpt2P15119 244 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Kcnj5P48545 419 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Sema4cQ64151 834 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ablim3Q69ZX8 682 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Lats1Q8BYR2 1129 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Fbxo45Q8K3B1 286 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Fam110cQ8VE94 421 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Bcl7bQ921K9 202 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 LipfQ9CPP7 395 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Fgf21Q9JJN1 210 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr727A2RTN7 324 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Saxo1B1AXP3 476 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gabrr3B2RXA8 464 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Nmur1O55040 428 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 GypaP14220 168 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tnfrsf1bP25119 474 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Rps5P97461 204 aaKnown RBP14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mtf1Q07243 675 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Slc35d3Q8BGF8 422 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Frmd6Q8C0V9 622 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Fbxw17Q8CFE8 466 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Serinc2Q8K0E7 450 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Q91V76 315 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 RbpmsQ9WVB0 197 aaKnown RBP14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Igkv16-104A0A0B4J1I1 116 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Vmn1r9A2RST7 299 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zfp40B1B1D3 796 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Scgb2b3D2XZ38 112 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zfp605E9QAH2 694 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mllt10O54826 1068 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cacng2O88602 323 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ca3P16015 260 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 6430531B16RikQ3V2J1 307 aa14.53□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms