Protein–RNA interactions for Protein: A0A1Y7VNZ0

Dcaf4, DDB1 and CUL4-associated factor 4, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dcaf4A0A1Y7VNZ0 Gm25239-201ENSMUST00000174915 86 ntBASIC31.49■■■□□ 2.63
Dcaf4A0A1Y7VNZ0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Dcaf4A0A1Y7VNZ0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Dcaf4A0A1Y7VNZ0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Dcaf4A0A1Y7VNZ0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Dcaf4A0A1Y7VNZ0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Dcaf4A0A1Y7VNZ0 Psd-208ENSMUST00000224556 2034 ntBASIC28.84■■■□□ 2.21
Dcaf4A0A1Y7VNZ0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Dcaf4A0A1Y7VNZ0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Dcaf4A0A1Y7VNZ0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Dcaf4A0A1Y7VNZ0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Dcaf4A0A1Y7VNZ0 Gm15042-201ENSMUST00000120212 883 ntBASIC27.56■■■□□ 2
Dcaf4A0A1Y7VNZ0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Dcaf4A0A1Y7VNZ0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Dcaf4A0A1Y7VNZ0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Dcaf4A0A1Y7VNZ0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Dcaf4A0A1Y7VNZ0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Dcaf4A0A1Y7VNZ0 Gm24109-201ENSMUST00000175489 103 ntBASIC27.27■■□□□ 1.96
Dcaf4A0A1Y7VNZ0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Dcaf4A0A1Y7VNZ0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.16■■□□□ 1.94
Dcaf4A0A1Y7VNZ0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Dcaf4A0A1Y7VNZ0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Dcaf4A0A1Y7VNZ0 Gm15045-201ENSMUST00000117359 883 ntBASIC26.9■■□□□ 1.9
Dcaf4A0A1Y7VNZ0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Dcaf4A0A1Y7VNZ0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Dcaf4A0A1Y7VNZ0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Dcaf4A0A1Y7VNZ0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Dcaf4A0A1Y7VNZ0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Dcaf4A0A1Y7VNZ0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Dcaf4A0A1Y7VNZ0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Dcaf4A0A1Y7VNZ0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Dcaf4A0A1Y7VNZ0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Dcaf4A0A1Y7VNZ0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Dcaf4A0A1Y7VNZ0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.34■■□□□ 1.81
Dcaf4A0A1Y7VNZ0 Gm23366-201ENSMUST00000175022 89 ntBASIC26.32■■□□□ 1.8
Dcaf4A0A1Y7VNZ0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Dcaf4A0A1Y7VNZ0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Dcaf4A0A1Y7VNZ0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Dcaf4A0A1Y7VNZ0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Dcaf4A0A1Y7VNZ0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.22■■□□□ 1.79
Dcaf4A0A1Y7VNZ0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.18■■□□□ 1.78
Dcaf4A0A1Y7VNZ0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Dcaf4A0A1Y7VNZ0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Dcaf4A0A1Y7VNZ0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Dcaf4A0A1Y7VNZ0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Dcaf4A0A1Y7VNZ0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.09■■□□□ 1.77
Dcaf4A0A1Y7VNZ0 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.09■■□□□ 1.77
Dcaf4A0A1Y7VNZ0 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.94■■□□□ 1.74
Dcaf4A0A1Y7VNZ0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Dcaf4A0A1Y7VNZ0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Dcaf4A0A1Y7VNZ0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Dcaf4A0A1Y7VNZ0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Dcaf4A0A1Y7VNZ0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Dcaf4A0A1Y7VNZ0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.78■■□□□ 1.72
Dcaf4A0A1Y7VNZ0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Dcaf4A0A1Y7VNZ0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Dcaf4A0A1Y7VNZ0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Dcaf4A0A1Y7VNZ0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Dcaf4A0A1Y7VNZ0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Dcaf4A0A1Y7VNZ0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Dcaf4A0A1Y7VNZ0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
Dcaf4A0A1Y7VNZ0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.44■■□□□ 1.66
Dcaf4A0A1Y7VNZ0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Dcaf4A0A1Y7VNZ0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.28■■□□□ 1.64
Dcaf4A0A1Y7VNZ0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Dcaf4A0A1Y7VNZ0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Dcaf4A0A1Y7VNZ0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Dcaf4A0A1Y7VNZ0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
Dcaf4A0A1Y7VNZ0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Dcaf4A0A1Y7VNZ0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.14■■□□□ 1.62
Dcaf4A0A1Y7VNZ0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Dcaf4A0A1Y7VNZ0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Dcaf4A0A1Y7VNZ0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Dcaf4A0A1Y7VNZ0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Dcaf4A0A1Y7VNZ0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Dcaf4A0A1Y7VNZ0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Dcaf4A0A1Y7VNZ0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Dcaf4A0A1Y7VNZ0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Dcaf4A0A1Y7VNZ0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Dcaf4A0A1Y7VNZ0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Dcaf4A0A1Y7VNZ0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Dcaf4A0A1Y7VNZ0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Dcaf4A0A1Y7VNZ0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Dcaf4A0A1Y7VNZ0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Dcaf4A0A1Y7VNZ0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.84■■□□□ 1.57
Dcaf4A0A1Y7VNZ0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Dcaf4A0A1Y7VNZ0 Gm25238-201ENSMUST00000174914 89 ntBASIC24.82■■□□□ 1.56
Dcaf4A0A1Y7VNZ0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Dcaf4A0A1Y7VNZ0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Dcaf4A0A1Y7VNZ0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Dcaf4A0A1Y7VNZ0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Dcaf4A0A1Y7VNZ0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Dcaf4A0A1Y7VNZ0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Dcaf4A0A1Y7VNZ0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Dcaf4A0A1Y7VNZ0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.66■■□□□ 1.54
Dcaf4A0A1Y7VNZ0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Dcaf4A0A1Y7VNZ0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Dcaf4A0A1Y7VNZ0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Dcaf4A0A1Y7VNZ0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.57■■□□□ 1.52
Dcaf4A0A1Y7VNZ0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms