Protein–RNA interactions for Protein: Q8K215

Lyrm4, LYR motif-containing protein 4, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lyrm4Q8K215 Gm25239-201ENSMUST00000174915 86 ntBASIC33.88■■■■□ 3.01
Lyrm4Q8K215 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Lyrm4Q8K215 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Lyrm4Q8K215 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Lyrm4Q8K215 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Lyrm4Q8K215 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Lyrm4Q8K215 Gm15042-201ENSMUST00000120212 883 ntBASIC30.16■■■□□ 2.42
Lyrm4Q8K215 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Lyrm4Q8K215 Psd-208ENSMUST00000224556 2034 ntBASIC29.64■■■□□ 2.33
Lyrm4Q8K215 Gm15045-201ENSMUST00000117359 883 ntBASIC29.56■■■□□ 2.32
Lyrm4Q8K215 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Lyrm4Q8K215 Gm24109-201ENSMUST00000175489 103 ntBASIC29.11■■■□□ 2.25
Lyrm4Q8K215 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Lyrm4Q8K215 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.08■■■□□ 2.25
Lyrm4Q8K215 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Lyrm4Q8K215 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Lyrm4Q8K215 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Lyrm4Q8K215 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Lyrm4Q8K215 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Lyrm4Q8K215 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Lyrm4Q8K215 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Lyrm4Q8K215 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Lyrm4Q8K215 Gm23366-201ENSMUST00000175022 89 ntBASIC28.4■■■□□ 2.14
Lyrm4Q8K215 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Lyrm4Q8K215 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Lyrm4Q8K215 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.32■■■□□ 2.12
Lyrm4Q8K215 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Lyrm4Q8K215 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Lyrm4Q8K215 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Lyrm4Q8K215 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Lyrm4Q8K215 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Lyrm4Q8K215 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.04■■■□□ 2.08
Lyrm4Q8K215 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Lyrm4Q8K215 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Lyrm4Q8K215 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Lyrm4Q8K215 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Lyrm4Q8K215 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Lyrm4Q8K215 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.68■■■□□ 2.02
Lyrm4Q8K215 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Lyrm4Q8K215 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.56■■■□□ 2
Lyrm4Q8K215 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Lyrm4Q8K215 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Lyrm4Q8K215 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.3■■□□□ 1.96
Lyrm4Q8K215 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Lyrm4Q8K215 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.28■■□□□ 1.96
Lyrm4Q8K215 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Lyrm4Q8K215 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Lyrm4Q8K215 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Lyrm4Q8K215 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Lyrm4Q8K215 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Lyrm4Q8K215 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Lyrm4Q8K215 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Lyrm4Q8K215 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.87■■□□□ 1.89
Lyrm4Q8K215 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Lyrm4Q8K215 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Lyrm4Q8K215 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Lyrm4Q8K215 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Lyrm4Q8K215 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.7■■□□□ 1.86
Lyrm4Q8K215 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Lyrm4Q8K215 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Lyrm4Q8K215 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.61■■□□□ 1.85
Lyrm4Q8K215 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Lyrm4Q8K215 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Lyrm4Q8K215 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Lyrm4Q8K215 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
Lyrm4Q8K215 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.55■■□□□ 1.84
Lyrm4Q8K215 Gm25238-201ENSMUST00000174914 89 ntBASIC26.55■■□□□ 1.84
Lyrm4Q8K215 Gm27325-201ENSMUST00000175467 74 ntBASIC26.53■■□□□ 1.84
Lyrm4Q8K215 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.52■■□□□ 1.84
Lyrm4Q8K215 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.52■■□□□ 1.84
Lyrm4Q8K215 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.37■■□□□ 1.81
Lyrm4Q8K215 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lyrm4Q8K215 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lyrm4Q8K215 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lyrm4Q8K215 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.31■■□□□ 1.8
Lyrm4Q8K215 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Lyrm4Q8K215 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Lyrm4Q8K215 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Lyrm4Q8K215 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Lyrm4Q8K215 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Lyrm4Q8K215 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Lyrm4Q8K215 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
Lyrm4Q8K215 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Lyrm4Q8K215 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Lyrm4Q8K215 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Lyrm4Q8K215 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Lyrm4Q8K215 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Lyrm4Q8K215 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Lyrm4Q8K215 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.97■■□□□ 1.75
Lyrm4Q8K215 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Lyrm4Q8K215 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.94■■□□□ 1.74
Lyrm4Q8K215 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lyrm4Q8K215 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lyrm4Q8K215 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.9■■□□□ 1.74
Lyrm4Q8K215 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Lyrm4Q8K215 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Lyrm4Q8K215 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Lyrm4Q8K215 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Lyrm4Q8K215 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.78■■□□□ 1.72
Lyrm4Q8K215 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms