RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 GSTA4O15217 222 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 UBOX5O94941 541 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 FESP07332 822 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 TCN1P20061 433 aaPredicted RBP11.5□□□□□ -0.57
VEGFA-224ENST00000523873 PTNP21246 168 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
VEGFA-224ENST00000523873 KDELR2P33947 212 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 MSX2P35548 267 aaPredicted RBP11.5□□□□□ -0.57
VEGFA-224ENST00000523873 APOBEC1P41238 236 aaKnown RBP11.5□□□□□ -0.57
VEGFA-224ENST00000523873 SLC1A3P43003 542 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 COPZ1P61923 177 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 SF3B4Q15427 424 aaKnown RBP eCLIP11.5□□□□□ -0.572e-10■■■□□ 18
VEGFA-224ENST00000523873 NRF1Q16656 503 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 CYBRD1Q53TN4 286 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 SYT14P1Q58G82 188 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 HIST2H2BCQ6DN03 193 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 C16orf89Q6UX73 402 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 TRPM8Q7Z2W7 1104 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 RBM15BQ8NDT2 890 aaKnown RBP11.5□□□□□ -0.57
VEGFA-224ENST00000523873 OR52E4Q8NGH9 312 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 OR6T1Q8NGN1 323 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 OSTF1Q92882 214 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 WNT2BQ93097 391 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 C3orf49Q96BT1 292 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 INTS12Q96CB8 462 aaKnown RBP11.5□□□□□ -0.57
VEGFA-224ENST00000523873 ARL5BQ96KC2 179 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 UCN2Q96RP3 112 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 CDRT15Q96T59 188 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 SERINC1Q9NRX5 453 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 KLHL28Q9NXS3 571 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 COQ3Q9NZJ6 369 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 STOML1Q9UBI4 398 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 CLEC4AQ9UMR7 237 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 TENM4Q6N022 2769 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 USP9XQ93008 2570 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-224ENST00000523873 A0A1B0GWA3 101 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 GJE1A6NN92 205 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 SYT5O00445 386 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 CLDN14O95500 239 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 IL2RAP01589 272 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 TMIGD3P0DMS9 266 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-224ENST00000523873 GRNP28799 593 aaKnown RBP11.49□□□□□ -0.57
VEGFA-224ENST00000523873 SLC7A1P30825 629 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 TIMP3P35625 211 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 CPOXP36551 454 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 HTR3AP46098 478 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 OR1E2P47887 323 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 CARD18P57730 90 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 NCALDP61601 193 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 SIRPAP78324 504 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 OR1Q1Q15612 314 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 XKRXQ6PP77 449 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 ATG4DQ86TL0 474 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-224ENST00000523873 TSPYL5Q86VY4 417 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-224ENST00000523873 RELL2Q8NC24 303 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-224ENST00000523873 BHLHE22Q8NFJ8 381 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-224ENST00000523873 RNF217Q8TC41 542 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 SLC35B4Q969S0 331 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 FAM162AQ96A26 154 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 TPD52L3Q96J77 140 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 PSMG3-AS1Q96PY0 264 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 MCHR1Q99705 422 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 PRRG4Q9BZD6 226 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 RPS6KB2Q9UBS0 482 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 TESQ9UGI8 421 aaKnown RBP11.49□□□□□ -0.57
VEGFA-224ENST00000523873 BAHCC1Q9P281 2608 aa11.49□□□□□ -0.57
VEGFA-224ENST00000523873 CPSF4LA6NMK7 179 aaKnown RBP11.48□□□□□ -0.57
VEGFA-224ENST00000523873 HSPB2A8KAH6 182 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 C19orf84I3L1E1 186 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 RCBTB2O95199 551 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 SYNGR4O95473 234 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 C8BP07358 591 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 IMPDH2P12268 514 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 GGT1P19440 569 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 ENPP1P22413 925 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 CALB2P22676 271 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 CXCR1P25024 350 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 COL8A1P27658 744 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 CHRNB4P30926 498 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 MYBPHQ13203 477 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 CEACAM7Q14002 265 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 HSPB2Q16082 182 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 ZNF239Q16600 458 aaKnown RBP11.48□□□□□ -0.57
VEGFA-224ENST00000523873 PDSS1Q5T2R2 415 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 VTCN1Q7Z7D3 282 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 CARM1Q86X55 608 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 P3H2Q8IVL5 708 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 CA5BP1Q8WTZ4 195 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 ASB5Q8WWX0 329 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 PROX1Q92786 737 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 TM9SF2Q99805 663 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 ZNF559Q9BR84 538 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 SH3GLB1Q9Y371 365 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 ZNF175Q9Y473 711 aa11.48□□□□□ -0.57
VEGFA-224ENST00000523873 SPIN1Q9Y657 262 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-224ENST00000523873 PRSS44E7EML9 344 aa11.47□□□□□ -0.57
VEGFA-224ENST00000523873 SULT2B1O00204 365 aa11.47□□□□□ -0.57
VEGFA-224ENST00000523873 ZNF682O95780 498 aa11.47□□□□□ -0.57
VEGFA-224ENST00000523873 SERPINA1P01009 418 aa11.47□□□□□ -0.57
VEGFA-224ENST00000523873 THY1P04216 161 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms