RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 HOXD1Q9GZZ0 328 aa4.47□□□□□ -1.69
PPP1R9A-201ENST00000289495 ISG20L2Q9H9L3 353 aaKnown RBP4.47□□□□□ -1.69
PPP1R9A-201ENST00000289495 SLC2A4RGQ9NR83 387 aa4.47□□□□□ -1.69
PPP1R9A-201ENST00000289495 DNAJB12Q9NXW2 375 aaKnown RBP4.47□□□□□ -1.69
PPP1R9A-201ENST00000289495 KCNE5Q9UJ90 142 aa4.47□□□□□ -1.69
PPP1R9A-201ENST00000289495 EFCAB7A8K855 629 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 AGRPO00253 132 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 CTNSO60931 367 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 IGHV4-34P06331 123 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 CHRNB1P11230 501 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 DRD5P21918 477 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 EDNRAP25101 427 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 DDOSTP39656 456 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 RFX2P48378 723 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 MAT1AQ00266 395 aaKnown RBP4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 SERTAD2Q14140 314 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 FZD2Q14332 565 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 SF3A2Q15428 464 aaKnown RBP4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 BICRALQ6AI39 1079 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 TPRA1Q86W33 373 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 GRAMD2AQ8IUY3 354 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 SFTPA2Q8IWL1 248 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 SLC35F2Q8IXU6 374 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 FAM174AQ8TBP5 190 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 RFT1Q96AA3 541 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 ZMYND19Q96E35 227 aaPredicted RBP4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 TCTN2Q96GX1 697 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 MSANTD3Q96H12 275 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 SPACA7Q96KW9 195 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 CTRCQ99895 268 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 WACQ9BTA9 647 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 FAM60AQ9NP50 221 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 ENAMQ9NRM1 1142 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 RBFOX1Q9NWB1 397 aaKnown RBP4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 MRTO4Q9UKD2 239 aaKnown RBP4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 PLCL2Q9UPR0 1127 aa4.46□□□□□ -1.69
PPP1R9A-201ENST00000289495 SERINC4A6NH21 518 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 B4DXG7 233 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 SCDO00767 359 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 FLRT2O43155 660 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 ZNF749O43361 778 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 NSA2O95478 260 aaKnown RBP4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 YES1P07947 543 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 GSTT2P0CG29 244 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 GSTT2BP0CG30 244 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 GAAP10253 952 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 RAB3BP20337 219 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 TBXA2RP21731 343 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 SHC1P29353 583 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 EVX1P49640 407 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 PSG6Q00889 435 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 MGAT2Q10469 447 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 FGFBP1Q14512 234 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 INSL4Q14641 139 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 TP53I3Q53FA7 332 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 OXLD1Q5BKU9 147 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 TCTE1Q5JU00 501 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 HLA-DQA1Q5Y7H0 255 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 SFXN4Q6P4A7 337 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 KIRREL2Q6UWL6 708 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 GHDCQ8N2G8 530 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 ARIH2OSQ8N7S6 290 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 FRMD1Q8N878 549 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 GATSQ8NAP1 163 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 ZNF485Q8NCK3 441 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 ZNF563Q8TA94 476 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 TRMT10AQ8TBZ6 339 aaKnown RBP4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 SLC35B4Q969S0 331 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 CTHRC1Q96CG8 243 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 AHCYL2Q96HN2 611 aaKnown RBP4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 HSPA12BQ96MM6 686 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 ZNF578Q96N58 590 aaPredicted RBP4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 MAP3K3Q99759 626 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 LRRC61Q9BV99 259 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 HCAR1Q9BXC0 346 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 RNF32Q9H0A6 362 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 PDE7BQ9NP56 450 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 MEPEQ9NQ76 525 aaPredicted RBP4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 RPRD1BQ9NQG5 326 aaKnown RBP4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 ING3Q9NXR8 418 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 FLRT3Q9NZU0 649 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 GNG8Q9UK08 70 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 RASD1Q9Y272 281 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 IER3IP1Q9Y5U9 82 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 CLCA3PQ9Y6N3 262 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 KNL1Q8NG31 2342 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 FAM172BPA6NC97 362 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 FIGNL2A6NMB9 653 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 S100A1P23297 94 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 RBMS1P29558 406 aaKnown RBP4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 CAPZBP47756 277 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 GDI2P50395 445 aaKnown RBP4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 NRG3P56975 720 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 RAB25P57735 213 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 OR12D2P58182 307 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 CD83Q01151 205 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 ERV3-1Q14264 604 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 ACSM3Q53FZ2 586 aa4.46□□□□□ -1.7
PPP1R9A-201ENST00000289495 IL20RBQ6UXL0 311 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms